RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 SMIM20Q8N5G0 67 aa8.81□□□□□ -1
AGRN-208ENST00000479707 H3BPC8 53 aa8.78□□□□□ -1
AGRN-208ENST00000479707 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
AGRN-208ENST00000479707 TRAV7A0A075B6U4 112 aa8.73□□□□□ -1.01
AGRN-208ENST00000479707 A8MUN3 132 aa8.71□□□□□ -1.02
AGRN-208ENST00000479707 SSPOA2VEC9 5147 aa8.71□□□□□ -1.02
AGRN-208ENST00000479707 NDUFC1O43677 76 aa8.67□□□□□ -1.02
AGRN-208ENST00000479707 SERP2Q8N6R1 65 aa8.63□□□□□ -1.03
AGRN-208ENST00000479707 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
AGRN-208ENST00000479707 DMAC1Q96GE9 116 aa8.58□□□□□ -1.04
AGRN-208ENST00000479707 SNURFQ9Y675 71 aa8.55□□□□□ -1.04
AGRN-208ENST00000479707 COX7CP15954 63 aa8.52□□□□□ -1.05
AGRN-208ENST00000479707 ANAPC13Q9BS18 74 aa8.52□□□□□ -1.05
AGRN-208ENST00000479707 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
AGRN-208ENST00000479707 H0YAA0 97 aa8.47□□□□□ -1.05
AGRN-208ENST00000479707 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
AGRN-208ENST00000479707 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
AGRN-208ENST00000479707 ACYP2P14621 99 aa8.45□□□□□ -1.06
AGRN-208ENST00000479707 FCGBPQ9Y6R7 5405 aaPredicted RBP8.44□□□□□ -1.06
AGRN-208ENST00000479707 KRTAP19-6Q3LI70 58 aa8.44□□□□□ -1.06
AGRN-208ENST00000479707 CRIPTQ9P021 101 aa8.41□□□□□ -1.06
AGRN-208ENST00000479707 Q5VV11 94 aa8.39□□□□□ -1.07
AGRN-208ENST00000479707 MT1BP07438 61 aa8.37□□□□□ -1.07
AGRN-208ENST00000479707 KRTAP19-8Q3LI54 63 aa8.37□□□□□ -1.07
AGRN-208ENST00000479707 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.33□□□□□ -1.08
AGRN-208ENST00000479707 CHKB-CPT1BH3BT56 60 aa8.32□□□□□ -1.08
AGRN-208ENST00000479707 SPANXA2-OT1Q8N9U9 137 aa8.32□□□□□ -1.08
AGRN-208ENST00000479707 P0C880 135 aa8.31□□□□□ -1.08
AGRN-208ENST00000479707 CCDC179H3BU77 68 aa8.28□□□□□ -1.08
AGRN-208ENST00000479707 SPTSSBQ8NFR3 76 aa8.27□□□□□ -1.09
AGRN-208ENST00000479707 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
AGRN-208ENST00000479707 H7BZZ5 65 aa8.23□□□□□ -1.09
AGRN-208ENST00000479707 CYSTM1Q9H1C7 97 aa8.22□□□□□ -1.09
AGRN-208ENST00000479707 R4GN34 69 aa8.22□□□□□ -1.09
AGRN-208ENST00000479707 A6NN06 94 aa8.2□□□□□ -1.1
AGRN-208ENST00000479707 M0QZ58 72 aa8.18□□□□□ -1.1
AGRN-208ENST00000479707 KRTAP9-7A8MTY7 169 aa8.15□□□□□ -1.1
AGRN-208ENST00000479707 COA5Q86WW8 74 aa8.12□□□□□ -1.11
AGRN-208ENST00000479707 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
AGRN-208ENST00000479707 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
AGRN-208ENST00000479707 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.11
AGRN-208ENST00000479707 LINC01554Q52M75 96 aa8.08□□□□□ -1.12
AGRN-208ENST00000479707 TMEM258P61165 79 aa8.06□□□□□ -1.12
AGRN-208ENST00000479707 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
AGRN-208ENST00000479707 PCP4P48539 62 aa8.05□□□□□ -1.12
AGRN-208ENST00000479707 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
AGRN-208ENST00000479707 MT1XP80297 61 aa7.91□□□□□ -1.14
AGRN-208ENST00000479707 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
AGRN-208ENST00000479707 SEC61GP60059 68 aa7.88□□□□□ -1.15
AGRN-208ENST00000479707 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
AGRN-208ENST00000479707 SERP1Q9Y6X1 66 aa7.87□□□□□ -1.15
AGRN-208ENST00000479707 KRTAP6-3Q3LI67 103 aa7.86□□□□□ -1.15
AGRN-208ENST00000479707 A0A1B0GU33 70 aa7.73□□□□□ -1.17
AGRN-208ENST00000479707 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
AGRN-208ENST00000479707 A0A1B0GU69 56 aa7.7□□□□□ -1.18
AGRN-208ENST00000479707 A0A0D9SG42 100 aa7.69□□□□□ -1.18
AGRN-208ENST00000479707 KMT2DO14686 5537 aa7.67□□□□□ -1.18
AGRN-208ENST00000479707 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
AGRN-208ENST00000479707 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
AGRN-208ENST00000479707 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
AGRN-208ENST00000479707 LINC01558Q9Y6Z2 57 aa7.6□□□□□ -1.19
AGRN-208ENST00000479707 KRTAP10-7P60409 375 aaPredicted RBP7.59□□□□□ -1.19
AGRN-208ENST00000479707 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
AGRN-208ENST00000479707 KRTAP5-9P26371 169 aa7.58□□□□□ -1.2
AGRN-208ENST00000479707 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
AGRN-208ENST00000479707 SPINT4Q6UDR6 99 aa7.56□□□□□ -1.2
AGRN-208ENST00000479707 V9GYY9 64 aa7.55□□□□□ -1.2
AGRN-208ENST00000479707 SMIM26A0A096LP01 95 aa7.54□□□□□ -1.2
AGRN-208ENST00000479707 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
AGRN-208ENST00000479707 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
AGRN-208ENST00000479707 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
AGRN-208ENST00000479707 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
AGRN-208ENST00000479707 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
AGRN-208ENST00000479707 A8MU10 97 aa7.48□□□□□ -1.21
AGRN-208ENST00000479707 SPRR2FQ96RM1 72 aa7.48□□□□□ -1.21
AGRN-208ENST00000479707 Q1T7F1 81 aa7.47□□□□□ -1.21
AGRN-208ENST00000479707 NEBP20929 6669 aa7.44□□□□□ -1.22
AGRN-208ENST00000479707 MDN1Q9NU22 5596 aa7.38□□□□□ -1.23
AGRN-208ENST00000479707 PSPHP1O15172 72 aa7.35□□□□□ -1.23
AGRN-208ENST00000479707 UQCR11O14957 56 aa7.34□□□□□ -1.23
AGRN-208ENST00000479707 SPRR2EP22531 72 aa7.31□□□□□ -1.24
AGRN-208ENST00000479707 SPRR2BP35325 72 aa7.31□□□□□ -1.24
AGRN-208ENST00000479707 SPRR2AP35326 72 aa7.31□□□□□ -1.24
AGRN-208ENST00000479707 LCE1AQ5T7P2 110 aa7.22□□□□□ -1.25
AGRN-208ENST00000479707 MIR22HGQ0VDD5 57 aa7.2□□□□□ -1.26
AGRN-208ENST00000479707 A6NED7 52 aa7.18□□□□□ -1.26
AGRN-208ENST00000479707 KRTAP20-1Q3LI63 56 aa7.18□□□□□ -1.26
AGRN-208ENST00000479707 C10orf95Q9H7T3 257 aa7.16□□□□□ -1.26
AGRN-208ENST00000479707 KRTAP19-7Q3SYF9 63 aa7.07□□□□□ -1.28
AGRN-208ENST00000479707 TNP1P09430 55 aa7.06□□□□□ -1.28
AGRN-208ENST00000479707 SPRR2DP22532 72 aa7.06□□□□□ -1.28
AGRN-208ENST00000479707 KRTAP2-3P0C7H8 128 aa7.05□□□□□ -1.28
AGRN-208ENST00000479707 KRTAP2-4Q9BYR9 128 aa7.05□□□□□ -1.28
AGRN-208ENST00000479707 K7ERS5 55 aa7.03□□□□□ -1.28
AGRN-208ENST00000479707 MT1EP04732 61 aa6.99□□□□□ -1.29
AGRN-208ENST00000479707 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
AGRN-208ENST00000479707 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
AGRN-208ENST00000479707 LCE3AQ5TA76 89 aa6.96□□□□□ -1.3
AGRN-208ENST00000479707 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
AGRN-208ENST00000479707 LCE3BQ5TA77 95 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms