RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 H0YAA0 97 aa6.67□□□□□ -1.34
DDX56-210ENST00000479440 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
DDX56-210ENST00000479440 M0R143 59 aa6.65□□□□□ -1.34
DDX56-210ENST00000479440 H3BT86 120 aa6.63□□□□□ -1.35
DDX56-210ENST00000479440 TP53AIP1Q9HCN2 124 aa6.62□□□□□ -1.35
DDX56-210ENST00000479440 A0A087WVE0 104 aa6.61□□□□□ -1.35
DDX56-210ENST00000479440 TSTD3H0UI37 97 aa6.61□□□□□ -1.35
DDX56-210ENST00000479440 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
DDX56-210ENST00000479440 KRTAP4-8Q9BYQ9 185 aa6.59□□□□□ -1.35
DDX56-210ENST00000479440 NDUFC1O43677 76 aa6.57□□□□□ -1.36
DDX56-210ENST00000479440 ADM2Q7Z4H4 148 aa6.56□□□□□ -1.36
DDX56-210ENST00000479440 UBL5Q9BZL1 73 aa6.53□□□□□ -1.36
DDX56-210ENST00000479440 CYP4F30PQ9H0H9 118 aa6.53□□□□□ -1.36
DDX56-210ENST00000479440 DSTQ03001 7570 aaKnown RBP6.5□□□□□ -1.37
DDX56-210ENST00000479440 R4GN34 69 aa6.47□□□□□ -1.37
DDX56-210ENST00000479440 LOC101927531A0A1B0GV80 90 aa6.46□□□□□ -1.38
DDX56-210ENST00000479440 K7EP34 96 aa6.44□□□□□ -1.38
DDX56-210ENST00000479440 TRAV22A0A0B4J277 110 aa6.43□□□□□ -1.38
DDX56-210ENST00000479440 KRTAP10-7P60409 375 aaPredicted RBP6.42□□□□□ -1.38
DDX56-210ENST00000479440 KRTAP10-12P60413 245 aa6.41□□□□□ -1.38
DDX56-210ENST00000479440 C20orf197Q8N268 126 aa6.39□□□□□ -1.39
DDX56-210ENST00000479440 A0A1W2PPM0 123 aa6.38□□□□□ -1.39
DDX56-210ENST00000479440 M0QZ58 72 aa6.38□□□□□ -1.39
DDX56-210ENST00000479440 ACYP1P07311 99 aa6.38□□□□□ -1.39
DDX56-210ENST00000479440 BATFQ16520 125 aa6.38□□□□□ -1.39
DDX56-210ENST00000479440 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
DDX56-210ENST00000479440 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
DDX56-210ENST00000479440 SPCS1Q9Y6A9 102 aa6.32□□□□□ -1.4
DDX56-210ENST00000479440 LINC01554Q52M75 96 aa6.31□□□□□ -1.4
DDX56-210ENST00000479440 P0C880 135 aa6.3□□□□□ -1.4
DDX56-210ENST00000479440 TMA7Q9Y2S6 64 aaKnown RBP6.28□□□□□ -1.4
DDX56-210ENST00000479440 ATOX1O00244 68 aa6.27□□□□□ -1.41
DDX56-210ENST00000479440 TAX1BP3O14907 124 aa6.27□□□□□ -1.41
DDX56-210ENST00000479440 H0Y9P7 68 aa6.23□□□□□ -1.41
DDX56-210ENST00000479440 UQCRQO14949 82 aa6.2□□□□□ -1.42
DDX56-210ENST00000479440 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
DDX56-210ENST00000479440 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
DDX56-210ENST00000479440 SMIM6P0DI80 62 aa6.15□□□□□ -1.42
DDX56-210ENST00000479440 PRO0461Q9UI25 63 aa6.14□□□□□ -1.43
DDX56-210ENST00000479440 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
DDX56-210ENST00000479440 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
DDX56-210ENST00000479440 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
DDX56-210ENST00000479440 HMCN1Q96RW7 5635 aa6.1□□□□□ -1.43
DDX56-210ENST00000479440 LINC00208Q96KT6 92 aa6.07□□□□□ -1.44
DDX56-210ENST00000479440 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
DDX56-210ENST00000479440 MT4P47944 62 aa6.03□□□□□ -1.44
DDX56-210ENST00000479440 KRTAP19-7Q3SYF9 63 aa6.03□□□□□ -1.44
DDX56-210ENST00000479440 AHNAK2Q8IVF2 5795 aa6.02□□□□□ -1.45
DDX56-210ENST00000479440 MT1EP04732 61 aa6.02□□□□□ -1.45
DDX56-210ENST00000479440 HIST1H4AP62805 103 aaKnown RBP6.02□□□□□ -1.45
DDX56-210ENST00000479440 CYSTM1Q9H1C7 97 aa6.02□□□□□ -1.45
DDX56-210ENST00000479440 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
DDX56-210ENST00000479440 MP68P56378 58 aa5.98□□□□□ -1.45
DDX56-210ENST00000479440 KRTAP5-10Q6L8G5 202 aa5.98□□□□□ -1.45
DDX56-210ENST00000479440 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
DDX56-210ENST00000479440 ETDBQ3ZM63 59 aa5.93□□□□□ -1.46
DDX56-210ENST00000479440 COL5A1-AS1Q5SY13 56 aa5.91□□□□□ -1.46
DDX56-210ENST00000479440 F8W1H4 67 aa5.9□□□□□ -1.46
DDX56-210ENST00000479440 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
DDX56-210ENST00000479440 GTF2H5Q6ZYL4 71 aa5.89□□□□□ -1.47
DDX56-210ENST00000479440 CAMK2N1Q7Z7J9 78 aa5.88□□□□□ -1.47
DDX56-210ENST00000479440 MT1GP13640 62 aa5.87□□□□□ -1.47
DDX56-210ENST00000479440 TRAV7A0A075B6U4 112 aa5.85□□□□□ -1.47
DDX56-210ENST00000479440 KRTAP5-7Q6L8G8 165 aa5.84□□□□□ -1.47
DDX56-210ENST00000479440 OCR1Q9BZK8 76 aa5.84□□□□□ -1.47
DDX56-210ENST00000479440 H3BPC8 53 aa5.83□□□□□ -1.48
DDX56-210ENST00000479440 FAM240AA0A1B0GVK7 77 aa5.82□□□□□ -1.48
DDX56-210ENST00000479440 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
DDX56-210ENST00000479440 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
DDX56-210ENST00000479440 MT1MQ8N339 61 aa5.77□□□□□ -1.49
DDX56-210ENST00000479440 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
DDX56-210ENST00000479440 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
DDX56-210ENST00000479440 ACYP2P14621 99 aa5.73□□□□□ -1.49
DDX56-210ENST00000479440 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
DDX56-210ENST00000479440 A0A0D9SG42 100 aa5.71□□□□□ -1.5
DDX56-210ENST00000479440 LINC00643Q86TS7 51 aa5.7□□□□□ -1.5
DDX56-210ENST00000479440 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
DDX56-210ENST00000479440 CHKB-CPT1BH3BT56 60 aa5.66□□□□□ -1.5
DDX56-210ENST00000479440 MT1LQ93083 61 aa5.66□□□□□ -1.5
DDX56-210ENST00000479440 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
DDX56-210ENST00000479440 LOC105371267A0A1B0GV96 52 aa5.62□□□□□ -1.51
DDX56-210ENST00000479440 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
DDX56-210ENST00000479440 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
DDX56-210ENST00000479440 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
DDX56-210ENST00000479440 SPINT4Q6UDR6 99 aa5.45□□□□□ -1.54
DDX56-210ENST00000479440 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
DDX56-210ENST00000479440 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
DDX56-210ENST00000479440 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
DDX56-210ENST00000479440 PCP4L1A6NKN8 68 aa5.36□□□□□ -1.55
DDX56-210ENST00000479440 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
DDX56-210ENST00000479440 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
DDX56-210ENST00000479440 SEC61GP60059 68 aa5.32□□□□□ -1.56
DDX56-210ENST00000479440 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
DDX56-210ENST00000479440 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
DDX56-210ENST00000479440 SERP1Q9Y6X1 66 aa5.3□□□□□ -1.56
DDX56-210ENST00000479440 SMIM20Q8N5G0 67 aa5.28□□□□□ -1.56
DDX56-210ENST00000479440 SPANXA2-OT1Q8N9U9 137 aa5.27□□□□□ -1.57
DDX56-210ENST00000479440 TNP1P09430 55 aa5.26□□□□□ -1.57
DDX56-210ENST00000479440 A0A1B0GU33 70 aa5.22□□□□□ -1.57
DDX56-210ENST00000479440 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms