RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 LCA10Q71F78 164 aa6.65□□□□□ -1.35
PCIF1-202ENST00000479348 SERP2Q8N6R1 65 aa6.65□□□□□ -1.35
PCIF1-202ENST00000479348 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
PCIF1-202ENST00000479348 MT1FP04733 61 aa6.62□□□□□ -1.35
PCIF1-202ENST00000479348 NDUFC1O43677 76 aa6.57□□□□□ -1.36
PCIF1-202ENST00000479348 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
PCIF1-202ENST00000479348 C20orf197Q8N268 126 aa6.55□□□□□ -1.36
PCIF1-202ENST00000479348 SNURFQ9Y675 71 aa6.55□□□□□ -1.36
PCIF1-202ENST00000479348 PCP4P48539 62 aa6.54□□□□□ -1.36
PCIF1-202ENST00000479348 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
PCIF1-202ENST00000479348 COX7CP15954 63 aa6.51□□□□□ -1.37
PCIF1-202ENST00000479348 ACYP2P14621 99 aa6.5□□□□□ -1.37
PCIF1-202ENST00000479348 SPANXA2-OT1Q8N9U9 137 aa6.49□□□□□ -1.37
PCIF1-202ENST00000479348 ANAPC13Q9BS18 74 aa6.47□□□□□ -1.37
PCIF1-202ENST00000479348 H0YAA0 97 aa6.46□□□□□ -1.38
PCIF1-202ENST00000479348 LCE2BO14633 110 aa6.42□□□□□ -1.38
PCIF1-202ENST00000479348 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
PCIF1-202ENST00000479348 SPTSSBQ8NFR3 76 aa6.38□□□□□ -1.39
PCIF1-202ENST00000479348 CRIPTQ9P021 101 aa6.37□□□□□ -1.39
PCIF1-202ENST00000479348 CHKB-CPT1BH3BT56 60 aa6.36□□□□□ -1.39
PCIF1-202ENST00000479348 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
PCIF1-202ENST00000479348 H7BZZ5 65 aa6.34□□□□□ -1.39
PCIF1-202ENST00000479348 ADM2Q7Z4H4 148 aa6.33□□□□□ -1.4
PCIF1-202ENST00000479348 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
PCIF1-202ENST00000479348 SPRR2GQ9BYE4 73 aa6.32□□□□□ -1.4
PCIF1-202ENST00000479348 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
PCIF1-202ENST00000479348 CCDC179H3BU77 68 aa6.27□□□□□ -1.41
PCIF1-202ENST00000479348 COA5Q86WW8 74 aa6.25□□□□□ -1.41
PCIF1-202ENST00000479348 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
PCIF1-202ENST00000479348 USH2AO75445 5202 aa6.22□□□□□ -1.41
PCIF1-202ENST00000479348 P0C880 135 aa6.22□□□□□ -1.41
PCIF1-202ENST00000479348 Q5VV11 94 aa6.21□□□□□ -1.42
PCIF1-202ENST00000479348 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
PCIF1-202ENST00000479348 R4GN34 69 aa6.18□□□□□ -1.42
PCIF1-202ENST00000479348 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
PCIF1-202ENST00000479348 MT1BP07438 61 aa6.17□□□□□ -1.42
PCIF1-202ENST00000479348 ATP5EP56381 51 aaPredicted RBP6.17□□□□□ -1.42
PCIF1-202ENST00000479348 M0QZ58 72 aa6.12□□□□□ -1.43
PCIF1-202ENST00000479348 TMEM258P61165 79 aa6.11□□□□□ -1.43
PCIF1-202ENST00000479348 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
PCIF1-202ENST00000479348 SEC61GP60059 68 aa6.07□□□□□ -1.44
PCIF1-202ENST00000479348 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
PCIF1-202ENST00000479348 SERP1Q9Y6X1 66 aa6.05□□□□□ -1.44
PCIF1-202ENST00000479348 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.44
PCIF1-202ENST00000479348 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
PCIF1-202ENST00000479348 A6NN06 94 aa6□□□□□ -1.45
PCIF1-202ENST00000479348 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
PCIF1-202ENST00000479348 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
PCIF1-202ENST00000479348 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
PCIF1-202ENST00000479348 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
PCIF1-202ENST00000479348 A0A1B0GU69 56 aa5.94□□□□□ -1.46
PCIF1-202ENST00000479348 A0A1B0GU33 70 aa5.92□□□□□ -1.46
PCIF1-202ENST00000479348 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
PCIF1-202ENST00000479348 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
PCIF1-202ENST00000479348 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
PCIF1-202ENST00000479348 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
PCIF1-202ENST00000479348 MT1XP80297 61 aa5.85□□□□□ -1.47
PCIF1-202ENST00000479348 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
PCIF1-202ENST00000479348 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
PCIF1-202ENST00000479348 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
PCIF1-202ENST00000479348 A0A0D9SG42 100 aa5.76□□□□□ -1.49
PCIF1-202ENST00000479348 V9GYY9 64 aa5.74□□□□□ -1.49
PCIF1-202ENST00000479348 CAMK2N1Q7Z7J9 78 aa5.72□□□□□ -1.49
PCIF1-202ENST00000479348 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
PCIF1-202ENST00000479348 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
PCIF1-202ENST00000479348 Q1T7F1 81 aa5.69□□□□□ -1.5
PCIF1-202ENST00000479348 UQCR11O14957 56 aa5.68□□□□□ -1.5
PCIF1-202ENST00000479348 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
PCIF1-202ENST00000479348 NEBP20929 6669 aa5.68□□□□□ -1.5
PCIF1-202ENST00000479348 A8MU10 97 aa5.65□□□□□ -1.51
PCIF1-202ENST00000479348 PSPHP1O15172 72 aa5.58□□□□□ -1.52
PCIF1-202ENST00000479348 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
PCIF1-202ENST00000479348 KRTAP20-1Q3LI63 56 aa5.58□□□□□ -1.52
PCIF1-202ENST00000479348 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
PCIF1-202ENST00000479348 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
PCIF1-202ENST00000479348 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
PCIF1-202ENST00000479348 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
PCIF1-202ENST00000479348 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
PCIF1-202ENST00000479348 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
PCIF1-202ENST00000479348 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
PCIF1-202ENST00000479348 A6NED7 52 aa5.44□□□□□ -1.54
PCIF1-202ENST00000479348 K7ERS5 55 aa5.44□□□□□ -1.54
PCIF1-202ENST00000479348 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
PCIF1-202ENST00000479348 C10orf95Q9H7T3 257 aa5.4□□□□□ -1.55
PCIF1-202ENST00000479348 KMT2DO14686 5537 aa5.37□□□□□ -1.55
PCIF1-202ENST00000479348 TNP1P09430 55 aa5.37□□□□□ -1.55
PCIF1-202ENST00000479348 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
PCIF1-202ENST00000479348 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
PCIF1-202ENST00000479348 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
PCIF1-202ENST00000479348 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
PCIF1-202ENST00000479348 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
PCIF1-202ENST00000479348 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
PCIF1-202ENST00000479348 SPRR2EP22531 72 aa5.28□□□□□ -1.56
PCIF1-202ENST00000479348 SPRR2BP35325 72 aa5.28□□□□□ -1.56
PCIF1-202ENST00000479348 SPRR2AP35326 72 aa5.28□□□□□ -1.56
PCIF1-202ENST00000479348 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
PCIF1-202ENST00000479348 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
PCIF1-202ENST00000479348 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
PCIF1-202ENST00000479348 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
PCIF1-202ENST00000479348 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms