RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 KRTAP9-3Q9BYQ3 159 aa12.67□□□□□ -0.38
CCM2-211ENST00000478582 CSAG1Q6PB30 78 aa12.64□□□□□ -0.39
CCM2-211ENST00000478582 KRTAP9-7A8MTY7 169 aa12.62□□□□□ -0.39
CCM2-211ENST00000478582 USH2AO75445 5202 aa12.62□□□□□ -0.39
CCM2-211ENST00000478582 KRTAP3-3Q9BYR6 98 aa12.6□□□□□ -0.39
CCM2-211ENST00000478582 LCE2BO14633 110 aa12.59□□□□□ -0.39
CCM2-211ENST00000478582 SERP2Q8N6R1 65 aa12.54□□□□□ -0.4
CCM2-211ENST00000478582 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.51□□□□□ -0.41
CCM2-211ENST00000478582 SSPOA2VEC9 5147 aa12.5□□□□□ -0.41
CCM2-211ENST00000478582 DMAC1Q96GE9 116 aa12.48□□□□□ -0.41
CCM2-211ENST00000478582 NDUFC1O43677 76 aa12.45□□□□□ -0.42
CCM2-211ENST00000478582 SNURFQ9Y675 71 aa12.42□□□□□ -0.42
CCM2-211ENST00000478582 C20orf197Q8N268 126 aa12.39□□□□□ -0.43
CCM2-211ENST00000478582 KRTAP19-1Q8IUB9 90 aa12.36□□□□□ -0.43
CCM2-211ENST00000478582 COX7CP15954 63 aa12.29□□□□□ -0.44
CCM2-211ENST00000478582 ACYP2P14621 99 aa12.28□□□□□ -0.44
CCM2-211ENST00000478582 H0YAA0 97 aa12.26□□□□□ -0.45
CCM2-211ENST00000478582 SPANXA2-OT1Q8N9U9 137 aa12.26□□□□□ -0.45
CCM2-211ENST00000478582 FCGBPQ9Y6R7 5405 aaPredicted RBP12.24□□□□□ -0.45
CCM2-211ENST00000478582 KRTAP19-6Q3LI70 58 aa12.16□□□□□ -0.46
CCM2-211ENST00000478582 ANAPC13Q9BS18 74 aa12.1□□□□□ -0.47
CCM2-211ENST00000478582 CRIPTQ9P021 101 aa12.1□□□□□ -0.47
CCM2-211ENST00000478582 SPRR2GQ9BYE4 73 aa12.09□□□□□ -0.47
CCM2-211ENST00000478582 ADM2Q7Z4H4 148 aa12.07□□□□□ -0.48
CCM2-211ENST00000478582 SPTSSBQ8NFR3 76 aa12.03□□□□□ -0.48
CCM2-211ENST00000478582 CHKB-CPT1BH3BT56 60 aa12.01□□□□□ -0.49
CCM2-211ENST00000478582 H7BZZ5 65 aa11.99□□□□□ -0.49
CCM2-211ENST00000478582 CYSTM1Q9H1C7 97 aa11.99□□□□□ -0.49
CCM2-211ENST00000478582 KRTAP19-8Q3LI54 63 aa11.94□□□□□ -0.5
CCM2-211ENST00000478582 MACF1Q9UPN3 7388 aaKnown RBP11.89□□□□□ -0.51
CCM2-211ENST00000478582 KRTAP3-2Q9BYR7 98 aa11.89□□□□□ -0.51
CCM2-211ENST00000478582 P0C880 135 aa11.88□□□□□ -0.51
CCM2-211ENST00000478582 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
CCM2-211ENST00000478582 Q5VV11 94 aa11.85□□□□□ -0.51
CCM2-211ENST00000478582 SYNE2Q8WXH0 6885 aaKnown RBP11.85□□□□□ -0.51
CCM2-211ENST00000478582 MT1BP07438 61 aa11.84□□□□□ -0.51
CCM2-211ENST00000478582 COA5Q86WW8 74 aa11.84□□□□□ -0.51
CCM2-211ENST00000478582 R4GN34 69 aa11.73□□□□□ -0.53
CCM2-211ENST00000478582 M0QZ58 72 aa11.65□□□□□ -0.54
CCM2-211ENST00000478582 A6NN06 94 aa11.61□□□□□ -0.55
CCM2-211ENST00000478582 ATP5EP56381 51 aaPredicted RBP11.58□□□□□ -0.56
CCM2-211ENST00000478582 KRTAP6-3Q3LI67 103 aa11.54□□□□□ -0.56
CCM2-211ENST00000478582 KRTAP10-5P60370 271 aa11.48□□□□□ -0.57
CCM2-211ENST00000478582 TMEM258P61165 79 aa11.45□□□□□ -0.58
CCM2-211ENST00000478582 SEC61GP60059 68 aa11.43□□□□□ -0.58
CCM2-211ENST00000478582 PLAC4Q8WY50 150 aa11.43□□□□□ -0.58
CCM2-211ENST00000478582 LINC01554Q52M75 96 aa11.42□□□□□ -0.58
CCM2-211ENST00000478582 SERP1Q9Y6X1 66 aa11.41□□□□□ -0.58
CCM2-211ENST00000478582 KRTAP13-4Q3LI77 160 aa11.3□□□□□ -0.6
CCM2-211ENST00000478582 MT1XP80297 61 aa11.23□□□□□ -0.61
CCM2-211ENST00000478582 PRO2289Q9P1D8 64 aa11.23□□□□□ -0.61
CCM2-211ENST00000478582 A0A1B0GU69 56 aa11.22□□□□□ -0.61
CCM2-211ENST00000478582 A0A1B0GU33 70 aa11.21□□□□□ -0.61
CCM2-211ENST00000478582 NEBP20929 6669 aa11.21□□□□□ -0.62
CCM2-211ENST00000478582 LINC01558Q9Y6Z2 57 aa11.09□□□□□ -0.63
CCM2-211ENST00000478582 SPATA8Q6RVD6 105 aa11.07□□□□□ -0.64
CCM2-211ENST00000478582 PRR15LQ9BU68 103 aa11.04□□□□□ -0.64
CCM2-211ENST00000478582 KRTAP5-9P26371 169 aa11.02□□□□□ -0.65
CCM2-211ENST00000478582 KRTAP20-1Q3LI63 56 aa11.01□□□□□ -0.65
CCM2-211ENST00000478582 MUC12Q9UKN1 5478 aa10.98□□□□□ -0.65
CCM2-211ENST00000478582 A0A0D9SG42 100 aa10.97□□□□□ -0.65
CCM2-211ENST00000478582 PCP4P48539 62 aa10.96□□□□□ -0.65
CCM2-211ENST00000478582 SMIM26A0A096LP01 95 aa10.89□□□□□ -0.67
CCM2-211ENST00000478582 KRTAP12-2P59991 146 aa10.89□□□□□ -0.67
CCM2-211ENST00000478582 CAMK2N1Q7Z7J9 78 aa10.85□□□□□ -0.67
CCM2-211ENST00000478582 KRTAP12-1P59990 96 aa10.82□□□□□ -0.68
CCM2-211ENST00000478582 KMT2DO14686 5537 aa10.8□□□□□ -0.68
CCM2-211ENST00000478582 SPINT4Q6UDR6 99 aa10.79□□□□□ -0.68
CCM2-211ENST00000478582 A8MU10 97 aa10.76□□□□□ -0.69
CCM2-211ENST00000478582 V9GYY9 64 aa10.75□□□□□ -0.69
CCM2-211ENST00000478582 Q1T7F1 81 aa10.71□□□□□ -0.69
CCM2-211ENST00000478582 UQCR11O14957 56 aa10.7□□□□□ -0.7
CCM2-211ENST00000478582 KRTAP10-7P60409 375 aaPredicted RBP10.7□□□□□ -0.7
CCM2-211ENST00000478582 KRTAP10-12P60413 245 aa10.69□□□□□ -0.7
CCM2-211ENST00000478582 SPRR2FQ96RM1 72 aa10.68□□□□□ -0.7
CCM2-211ENST00000478582 MDN1Q9NU22 5596 aa10.66□□□□□ -0.7
CCM2-211ENST00000478582 KRTAP8-1Q8IUC2 63 aa10.66□□□□□ -0.7
CCM2-211ENST00000478582 RPS28P62857 69 aaKnown RBP10.65□□□□□ -0.7
CCM2-211ENST00000478582 KRTAP4-8A0A0G2JLE6 195 aa10.55□□□□□ -0.72
CCM2-211ENST00000478582 PSPHP1O15172 72 aa10.55□□□□□ -0.72
CCM2-211ENST00000478582 KRTAP4-8Q9BYQ9 185 aa10.55□□□□□ -0.72
CCM2-211ENST00000478582 SPRR2EP22531 72 aa10.52□□□□□ -0.73
CCM2-211ENST00000478582 SPRR2BP35325 72 aa10.52□□□□□ -0.73
CCM2-211ENST00000478582 SPRR2AP35326 72 aa10.52□□□□□ -0.73
CCM2-211ENST00000478582 MIR22HGQ0VDD5 57 aa10.49□□□□□ -0.73
CCM2-211ENST00000478582 KRTAP2-3P0C7H8 128 aa10.47□□□□□ -0.73
CCM2-211ENST00000478582 KRTAP2-4Q9BYR9 128 aa10.47□□□□□ -0.73
CCM2-211ENST00000478582 LCE1AQ5T7P2 110 aa10.4□□□□□ -0.74
CCM2-211ENST00000478582 C10orf95Q9H7T3 257 aa10.3□□□□□ -0.76
CCM2-211ENST00000478582 A6NED7 52 aa10.23□□□□□ -0.77
CCM2-211ENST00000478582 K7ERS5 55 aa10.19□□□□□ -0.78
CCM2-211ENST00000478582 TNP1P09430 55 aa10.17□□□□□ -0.78
CCM2-211ENST00000478582 SPRR2DP22532 72 aa10.17□□□□□ -0.78
CCM2-211ENST00000478582 KRTAP2-2Q9BYT5 123 aa10.09□□□□□ -0.79
CCM2-211ENST00000478582 KRTAP2-1Q9BYU5 128 aa10.09□□□□□ -0.79
CCM2-211ENST00000478582 KRTAP19-7Q3SYF9 63 aa10.03□□□□□ -0.8
CCM2-211ENST00000478582 MT1EP04732 61 aa9.92□□□□□ -0.82
CCM2-211ENST00000478582 LCE3AQ5TA76 89 aa9.92□□□□□ -0.82
CCM2-211ENST00000478582 CDC42SE1Q9NRR8 79 aa9.92□□□□□ -0.82
CCM2-211ENST00000478582 KRTAP19-5Q3LI72 72 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms