RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-222	ENST00000478095		H0Y9P7	68 aa		4.96	□□□□□ -1.62
HDAC6-222	ENST00000478095	MT2A	P02795	61 aa		4.96	□□□□□ -1.62
HDAC6-222	ENST00000478095	CYP4F30P	Q9H0H9	118 aa		4.96	□□□□□ -1.62
HDAC6-222	ENST00000478095	LOC101927531	A0A1B0GV80	90 aa		4.95	□□□□□ -1.62
HDAC6-222	ENST00000478095		K7ERU9	68 aa		4.95	□□□□□ -1.62
HDAC6-222	ENST00000478095	MT1F	P04733	61 aa		4.94	□□□□□ -1.62
HDAC6-222	ENST00000478095	C1orf64	Q8NEQ6	169 aa		4.94	□□□□□ -1.62
HDAC6-222	ENST00000478095	ATOX1	O00244	68 aa		4.92	□□□□□ -1.62
HDAC6-222	ENST00000478095	MT-ATP8	P03928	68 aa		4.92	□□□□□ -1.62
HDAC6-222	ENST00000478095	OCR1	Q9BZK8	76 aa		4.92	□□□□□ -1.62
HDAC6-222	ENST00000478095	FSIP2	Q5CZC0	6907 aa		4.91	□□□□□ -1.62
HDAC6-222	ENST00000478095	KRTAP10-10	P60014	251 aa		4.91	□□□□□ -1.62
HDAC6-222	ENST00000478095	SCGB1A1	P11684	91 aa		4.9	□□□□□ -1.63
HDAC6-222	ENST00000478095	LINC00208	Q96KT6	92 aa		4.89	□□□□□ -1.63
HDAC6-222	ENST00000478095	MP68	P56378	58 aa		4.88	□□□□□ -1.63
HDAC6-222	ENST00000478095	C5orf47	Q569G3	176 aa		4.88	□□□□□ -1.63
HDAC6-222	ENST00000478095		S4R3F8	94 aa		4.88	□□□□□ -1.63
HDAC6-222	ENST00000478095	KLKP1	Q107X0	134 aa		4.86	□□□□□ -1.63
HDAC6-222	ENST00000478095	LCA10	Q71F78	164 aa		4.86	□□□□□ -1.63
HDAC6-222	ENST00000478095	IMUP	Q9GZP8	106 aa		4.86	□□□□□ -1.63
HDAC6-222	ENST00000478095	FAM236A	A0A1B0GUQ0	79 aa		4.84	□□□□□ -1.63
HDAC6-222	ENST00000478095	FAM236B	A0A1B0GV22	79 aa		4.84	□□□□□ -1.63
HDAC6-222	ENST00000478095	CRCT1	Q9UGL9	99 aa		4.84	□□□□□ -1.63
HDAC6-222	ENST00000478095	CSAG1	Q6PB30	78 aa		4.81	□□□□□ -1.64
HDAC6-222	ENST00000478095		H3BPC8	53 aa		4.8	□□□□□ -1.64
HDAC6-222	ENST00000478095	SVIP	Q8NHG7	77 aa		4.79	□□□□□ -1.64
HDAC6-222	ENST00000478095	USH2A	O75445	5202 aa		4.79	□□□□□ -1.64
HDAC6-222	ENST00000478095	TRAV7	A0A075B6U4	112 aa		4.76	□□□□□ -1.65
HDAC6-222	ENST00000478095		A8MUN3	132 aa		4.76	□□□□□ -1.65
HDAC6-222	ENST00000478095	SMIM20	Q8N5G0	67 aa		4.76	□□□□□ -1.65
HDAC6-222	ENST00000478095	SSPO	A2VEC9	5147 aa		4.73	□□□□□ -1.65
HDAC6-222	ENST00000478095	NDUFC1	O43677	76 aa		4.73	□□□□□ -1.65
HDAC6-222	ENST00000478095	DMAC1	Q96GE9	116 aa		4.7	□□□□□ -1.66
HDAC6-222	ENST00000478095	SNURF	Q9Y675	71 aa		4.69	□□□□□ -1.66
HDAC6-222	ENST00000478095	SERP2	Q8N6R1	65 aa		4.67	□□□□□ -1.66
HDAC6-222	ENST00000478095	LCE1A	Q5T7P2	110 aa		4.66	□□□□□ -1.66
HDAC6-222	ENST00000478095	C20orf197	Q8N268	126 aa		4.66	□□□□□ -1.66
HDAC6-222	ENST00000478095	ADM2	Q7Z4H4	148 aa		4.62	□□□□□ -1.67
HDAC6-222	ENST00000478095		H0YAA0	97 aa		4.61	□□□□□ -1.67
HDAC6-222	ENST00000478095	SPRR2G	Q9BYE4	73 aa		4.61	□□□□□ -1.67
HDAC6-222	ENST00000478095	ACYP2	P14621	99 aa		4.6	□□□□□ -1.67
HDAC6-222	ENST00000478095	KRTAP19-6	Q3LI70	58 aa		4.58	□□□□□ -1.68
HDAC6-222	ENST00000478095	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.58	□□□□□ -1.68
HDAC6-222	ENST00000478095	COX7C	P15954	63 aa		4.57	□□□□□ -1.68
HDAC6-222	ENST00000478095	CRIPT	Q9P021	101 aa		4.57	□□□□□ -1.68
HDAC6-222	ENST00000478095	MT1B	P07438	61 aa		4.56	□□□□□ -1.68
HDAC6-222	ENST00000478095	KRTAP19-8	Q3LI54	63 aa		4.56	□□□□□ -1.68
HDAC6-222	ENST00000478095		Q5VV11	94 aa		4.56	□□□□□ -1.68
HDAC6-222	ENST00000478095	SPANXA2-OT1	Q8N9U9	137 aa		4.56	□□□□□ -1.68
HDAC6-222	ENST00000478095	CHKB-CPT1B	H3BT56	60 aa		4.55	□□□□□ -1.68
HDAC6-222	ENST00000478095		P0C880	135 aa		4.54	□□□□□ -1.68
HDAC6-222	ENST00000478095	CYSTM1	Q9H1C7	97 aa		4.52	□□□□□ -1.69
HDAC6-222	ENST00000478095	PCP4	P48539	62 aa		4.51	□□□□□ -1.69
HDAC6-222	ENST00000478095	SPTSSB	Q8NFR3	76 aa		4.51	□□□□□ -1.69
HDAC6-222	ENST00000478095	ANAPC13	Q9BS18	74 aa		4.51	□□□□□ -1.69
HDAC6-222	ENST00000478095		R4GN34	69 aa		4.48	□□□□□ -1.69
HDAC6-222	ENST00000478095		H7BZZ5	65 aa		4.47	□□□□□ -1.69
HDAC6-222	ENST00000478095		M0QZ58	72 aa		4.47	□□□□□ -1.69
HDAC6-222	ENST00000478095	COA5	Q86WW8	74 aa		4.46	□□□□□ -1.7
HDAC6-222	ENST00000478095	MACF1	Q9UPN3	7388 aa	Known RBP	4.45	□□□□□ -1.7
HDAC6-222	ENST00000478095		A6NN06	94 aa		4.45	□□□□□ -1.7
HDAC6-222	ENST00000478095	CCDC179	H3BU77	68 aa		4.42	□□□□□ -1.7
HDAC6-222	ENST00000478095	LINC01554	Q52M75	96 aa		4.42	□□□□□ -1.7
HDAC6-222	ENST00000478095		A0A0A0MQY5	61 aa		4.4	□□□□□ -1.71
HDAC6-222	ENST00000478095	KRTAP10-5	P60370	271 aa		4.4	□□□□□ -1.71
HDAC6-222	ENST00000478095	PLAC4	Q8WY50	150 aa		4.37	□□□□□ -1.71
HDAC6-222	ENST00000478095	SYNE2	Q8WXH0	6885 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-222	ENST00000478095	KRTAP2-2	Q9BYT5	123 aa		4.33	□□□□□ -1.72
HDAC6-222	ENST00000478095	MT1X	P80297	61 aa		4.32	□□□□□ -1.72
HDAC6-222	ENST00000478095	KRTAP13-4	Q3LI77	160 aa		4.31	□□□□□ -1.72
HDAC6-222	ENST00000478095	SEC61G	P60059	68 aa		4.3	□□□□□ -1.72
HDAC6-222	ENST00000478095	PRO2289	Q9P1D8	64 aa		4.29	□□□□□ -1.72
HDAC6-222	ENST00000478095	SERP1	Q9Y6X1	66 aa		4.29	□□□□□ -1.72
HDAC6-222	ENST00000478095	ATP5E	P56381	51 aa	Predicted RBP	4.26	□□□□□ -1.73
HDAC6-222	ENST00000478095	MT3	P25713	68 aa		4.24	□□□□□ -1.73
HDAC6-222	ENST00000478095	KRTAP6-3	Q3LI67	103 aa		4.24	□□□□□ -1.73
HDAC6-222	ENST00000478095	TMEM258	P61165	79 aa		4.23	□□□□□ -1.73
HDAC6-222	ENST00000478095		A0A1B0GU33	70 aa		4.22	□□□□□ -1.73
HDAC6-222	ENST00000478095		A0A1B0GU69	56 aa		4.22	□□□□□ -1.73
HDAC6-222	ENST00000478095	SPATA8	Q6RVD6	105 aa		4.22	□□□□□ -1.73
HDAC6-222	ENST00000478095		A0A0D9SG42	100 aa		4.21	□□□□□ -1.74
HDAC6-222	ENST00000478095	KRTAP10-7	P60409	375 aa	Predicted RBP	4.2	□□□□□ -1.74
HDAC6-222	ENST00000478095	CAMK2N1	Q7Z7J9	78 aa		4.16	□□□□□ -1.74
HDAC6-222	ENST00000478095	KMT2D	O14686	5537 aa		4.14	□□□□□ -1.75
HDAC6-222	ENST00000478095	KRTAP12-2	P59991	146 aa		4.14	□□□□□ -1.75
HDAC6-222	ENST00000478095	SPINT4	Q6UDR6	99 aa		4.14	□□□□□ -1.75
HDAC6-222	ENST00000478095	PRR15L	Q9BU68	103 aa		4.12	□□□□□ -1.75
HDAC6-222	ENST00000478095	LINC01558	Q9Y6Z2	57 aa		4.12	□□□□□ -1.75
HDAC6-222	ENST00000478095		A8MU10	97 aa		4.11	□□□□□ -1.75
HDAC6-222	ENST00000478095	KRTAP5-9	P26371	169 aa		4.11	□□□□□ -1.75
HDAC6-222	ENST00000478095	MUC12	Q9UKN1	5478 aa		4.1	□□□□□ -1.75
HDAC6-222	ENST00000478095	KRTAP12-1	P59990	96 aa		4.1	□□□□□ -1.75
HDAC6-222	ENST00000478095	KRTAP8-1	Q8IUC2	63 aa		4.09	□□□□□ -1.75
HDAC6-222	ENST00000478095	NEB	P20929	6669 aa		4.08	□□□□□ -1.76
HDAC6-222	ENST00000478095	SMIM26	A0A096LP01	95 aa		4.08	□□□□□ -1.76
HDAC6-222	ENST00000478095	KRTAP10-12	P60413	245 aa		4.08	□□□□□ -1.76
HDAC6-222	ENST00000478095	SPRR2F	Q96RM1	72 aa		4.06	□□□□□ -1.76
HDAC6-222	ENST00000478095	MDN1	Q9NU22	5596 aa		4.02	□□□□□ -1.77
HDAC6-222	ENST00000478095	LCE1E	Q5T753	118 aa		4.01	□□□□□ -1.77
HDAC6-222	ENST00000478095	KRTAP5-11	Q6L8G4	156 aa		4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms