RNA–Protein interactions for RNA: ENST00000477844.1

NUPL2-206, Transcript of nucleoporin like 2, humanhuman

TSL 1 (best)

Gene NUPL2, Length 2,529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUPL2-206ENST00000477844 ATP11AUNQ6ZP68 121 aa6.29□□□□□ -1.4
NUPL2-206ENST00000477844 CDC42SE1Q9NRR8 79 aa6.28□□□□□ -1.4
NUPL2-206ENST00000477844 KTN1-AS1Q86SY8 53 aa6.27□□□□□ -1.41
NUPL2-206ENST00000477844 RPL37P61927 97 aaKnown RBP6.26□□□□□ -1.41
NUPL2-206ENST00000477844 COX6B2Q6YFQ2 88 aa6.22□□□□□ -1.41
NUPL2-206ENST00000477844 HERC2O95714 4834 aa6.18□□□□□ -1.42
NUPL2-206ENST00000477844 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
NUPL2-206ENST00000477844 A6NN06 94 aa6.16□□□□□ -1.42
NUPL2-206ENST00000477844 UQCR11O14957 56 aa6.15□□□□□ -1.43
NUPL2-206ENST00000477844 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.43
NUPL2-206ENST00000477844 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
NUPL2-206ENST00000477844 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
NUPL2-206ENST00000477844 H0YAA0 97 aa6.1□□□□□ -1.43
NUPL2-206ENST00000477844 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
NUPL2-206ENST00000477844 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
NUPL2-206ENST00000477844 A0A1B0GU33 70 aa6.05□□□□□ -1.44
NUPL2-206ENST00000477844 S4R3F8 94 aa6.04□□□□□ -1.44
NUPL2-206ENST00000477844 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
NUPL2-206ENST00000477844 MUC2Q02817 5179 aa6.03□□□□□ -1.44
NUPL2-206ENST00000477844 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
NUPL2-206ENST00000477844 BIRC6Q9NR09 4857 aa6.02□□□□□ -1.45
NUPL2-206ENST00000477844 J3QL48 77 aa6.01□□□□□ -1.45
NUPL2-206ENST00000477844 MUC17Q685J3 4493 aa6.01□□□□□ -1.45
NUPL2-206ENST00000477844 KRTAP10-6P60371 365 aaPredicted RBP6.01□□□□□ -1.45
NUPL2-206ENST00000477844 HERC1Q15751 4861 aa6□□□□□ -1.45
NUPL2-206ENST00000477844 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
NUPL2-206ENST00000477844 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
NUPL2-206ENST00000477844 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
NUPL2-206ENST00000477844 P0C880 135 aa5.98□□□□□ -1.45
NUPL2-206ENST00000477844 PCLOQ9Y6V0 5065 aa5.96□□□□□ -1.45
NUPL2-206ENST00000477844 A0A0D9SG42 100 aa5.94□□□□□ -1.46
NUPL2-206ENST00000477844 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
NUPL2-206ENST00000477844 CRIPTQ9P021 101 aa5.83□□□□□ -1.48
NUPL2-206ENST00000477844 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
NUPL2-206ENST00000477844 CSAG1Q6PB30 78 aa5.82□□□□□ -1.48
NUPL2-206ENST00000477844 HMCN2Q8NDA2 5059 aa5.78□□□□□ -1.48
NUPL2-206ENST00000477844 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
NUPL2-206ENST00000477844 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
NUPL2-206ENST00000477844 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
NUPL2-206ENST00000477844 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
NUPL2-206ENST00000477844 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.5
NUPL2-206ENST00000477844 RNF213Q63HN8 5207 aa5.7□□□□□ -1.5
NUPL2-206ENST00000477844 K7ERS5 55 aa5.68□□□□□ -1.5
NUPL2-206ENST00000477844 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
NUPL2-206ENST00000477844 M0QZ58 72 aa5.66□□□□□ -1.5
NUPL2-206ENST00000477844 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.51
NUPL2-206ENST00000477844 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
NUPL2-206ENST00000477844 ROMO1P60602 79 aa5.6□□□□□ -1.51
NUPL2-206ENST00000477844 R4GN34 69 aa5.6□□□□□ -1.51
NUPL2-206ENST00000477844 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
NUPL2-206ENST00000477844 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
NUPL2-206ENST00000477844 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
NUPL2-206ENST00000477844 M0R2T5 61 aa5.38□□□□□ -1.55
NUPL2-206ENST00000477844 MT1HP80294 61 aa5.37□□□□□ -1.55
NUPL2-206ENST00000477844 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
NUPL2-206ENST00000477844 MT1FP04733 61 aa5.26□□□□□ -1.57
NUPL2-206ENST00000477844 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
NUPL2-206ENST00000477844 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
NUPL2-206ENST00000477844 MT2AP02795 61 aa5.24□□□□□ -1.57
NUPL2-206ENST00000477844 KRTAP10-10P60014 251 aa5.23□□□□□ -1.57
NUPL2-206ENST00000477844 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
NUPL2-206ENST00000477844 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
NUPL2-206ENST00000477844 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
NUPL2-206ENST00000477844 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
NUPL2-206ENST00000477844 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
NUPL2-206ENST00000477844 TNP1P09430 55 aa5.02□□□□□ -1.61
NUPL2-206ENST00000477844 USH2AO75445 5202 aa5.02□□□□□ -1.61
NUPL2-206ENST00000477844 MT1BP07438 61 aa5.01□□□□□ -1.61
NUPL2-206ENST00000477844 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
NUPL2-206ENST00000477844 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.61
NUPL2-206ENST00000477844 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
NUPL2-206ENST00000477844 MT1XP80297 61 aa4.92□□□□□ -1.62
NUPL2-206ENST00000477844 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
NUPL2-206ENST00000477844 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
NUPL2-206ENST00000477844 LCE2BO14633 110 aa4.89□□□□□ -1.63
NUPL2-206ENST00000477844 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
NUPL2-206ENST00000477844 KMT2DO14686 5537 aa4.84□□□□□ -1.63
NUPL2-206ENST00000477844 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
NUPL2-206ENST00000477844 FSIP2Q5CZC0 6907 aa4.76□□□□□ -1.65
NUPL2-206ENST00000477844 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
NUPL2-206ENST00000477844 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
NUPL2-206ENST00000477844 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
NUPL2-206ENST00000477844 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
NUPL2-206ENST00000477844 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
NUPL2-206ENST00000477844 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
NUPL2-206ENST00000477844 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.66
NUPL2-206ENST00000477844 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.66
NUPL2-206ENST00000477844 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
NUPL2-206ENST00000477844 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
NUPL2-206ENST00000477844 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
NUPL2-206ENST00000477844 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
NUPL2-206ENST00000477844 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
NUPL2-206ENST00000477844 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
NUPL2-206ENST00000477844 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
NUPL2-206ENST00000477844 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
NUPL2-206ENST00000477844 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
NUPL2-206ENST00000477844 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
NUPL2-206ENST00000477844 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
NUPL2-206ENST00000477844 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
NUPL2-206ENST00000477844 INE1O15225 51 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms