RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
PDLIM1-202ENST00000477757 A8MUN3 132 aa8.31□□□□□ -1.08
PDLIM1-202ENST00000477757 PYY3Q5JQD4 70 aa8.31□□□□□ -1.08
PDLIM1-202ENST00000477757 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-202ENST00000477757 A0A087WVE0 104 aa8.3□□□□□ -1.08
PDLIM1-202ENST00000477757 H0YAA0 97 aa8.29□□□□□ -1.08
PDLIM1-202ENST00000477757 DSTQ03001 7570 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-202ENST00000477757 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
PDLIM1-202ENST00000477757 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
PDLIM1-202ENST00000477757 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.1
PDLIM1-202ENST00000477757 H3BT86 120 aa8.13□□□□□ -1.11
PDLIM1-202ENST00000477757 NDUFC1O43677 76 aa8.13□□□□□ -1.11
PDLIM1-202ENST00000477757 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
PDLIM1-202ENST00000477757 H3BS24 57 aa8.11□□□□□ -1.11
PDLIM1-202ENST00000477757 M0R143 59 aa8.11□□□□□ -1.11
PDLIM1-202ENST00000477757 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
PDLIM1-202ENST00000477757 TSTD3H0UI37 97 aa8.07□□□□□ -1.12
PDLIM1-202ENST00000477757 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
PDLIM1-202ENST00000477757 KRTAP4-9Q9BYQ8 210 aa8.06□□□□□ -1.12
PDLIM1-202ENST00000477757 R4GN34 69 aa8.01□□□□□ -1.13
PDLIM1-202ENST00000477757 UBL5Q9BZL1 73 aa8□□□□□ -1.13
PDLIM1-202ENST00000477757 K7EP34 96 aa7.99□□□□□ -1.13
PDLIM1-202ENST00000477757 LOC101927531A0A1B0GV80 90 aa7.96□□□□□ -1.14
PDLIM1-202ENST00000477757 TRAV22A0A0B4J277 110 aa7.91□□□□□ -1.14
PDLIM1-202ENST00000477757 M0QZ58 72 aa7.91□□□□□ -1.14
PDLIM1-202ENST00000477757 P0C880 135 aa7.89□□□□□ -1.15
PDLIM1-202ENST00000477757 HMCN1Q96RW7 5635 aa7.86□□□□□ -1.15
PDLIM1-202ENST00000477757 C20orf197Q8N268 126 aa7.86□□□□□ -1.15
PDLIM1-202ENST00000477757 ACYP1P07311 99 aa7.85□□□□□ -1.15
PDLIM1-202ENST00000477757 A0A1W2PPM0 123 aa7.83□□□□□ -1.16
PDLIM1-202ENST00000477757 LINC01554Q52M75 96 aa7.82□□□□□ -1.16
PDLIM1-202ENST00000477757 LCE1DQ5T752 114 aa7.82□□□□□ -1.16
PDLIM1-202ENST00000477757 C9orf118A6NHY6 69 aa7.81□□□□□ -1.16
PDLIM1-202ENST00000477757 AHNAK2Q8IVF2 5795 aa7.81□□□□□ -1.16
PDLIM1-202ENST00000477757 LCE5AQ5TCM9 118 aa7.8□□□□□ -1.16
PDLIM1-202ENST00000477757 SPCS1Q9Y6A9 102 aa7.79□□□□□ -1.16
PDLIM1-202ENST00000477757 BATFQ16520 125 aa7.78□□□□□ -1.16
PDLIM1-202ENST00000477757 TAX1BP3O14907 124 aa7.72□□□□□ -1.17
PDLIM1-202ENST00000477757 ATOX1O00244 68 aa7.68□□□□□ -1.18
PDLIM1-202ENST00000477757 H0Y9P7 68 aa7.67□□□□□ -1.18
PDLIM1-202ENST00000477757 KRTAP19-3Q7Z4W3 81 aa7.66□□□□□ -1.18
PDLIM1-202ENST00000477757 UQCRQO14949 82 aa7.63□□□□□ -1.19
PDLIM1-202ENST00000477757 KRTAP5-10Q6L8G5 202 aa7.63□□□□□ -1.19
PDLIM1-202ENST00000477757 KRTAP19-7Q3SYF9 63 aa7.62□□□□□ -1.19
PDLIM1-202ENST00000477757 MT4P47944 62 aa7.61□□□□□ -1.19
PDLIM1-202ENST00000477757 LCE4AQ5TA78 99 aa7.61□□□□□ -1.19
PDLIM1-202ENST00000477757 MT1EP04732 61 aa7.59□□□□□ -1.19
PDLIM1-202ENST00000477757 PRO0461Q9UI25 63 aa7.59□□□□□ -1.19
PDLIM1-202ENST00000477757 CYSTM1Q9H1C7 97 aa7.55□□□□□ -1.2
PDLIM1-202ENST00000477757 MT-ATP8P03928 68 aa7.51□□□□□ -1.21
PDLIM1-202ENST00000477757 SMIM6P0DI80 62 aa7.49□□□□□ -1.21
PDLIM1-202ENST00000477757 LINC00208Q96KT6 92 aa7.46□□□□□ -1.22
PDLIM1-202ENST00000477757 KRTAP5-7Q6L8G8 165 aa7.44□□□□□ -1.22
PDLIM1-202ENST00000477757 MT1GP13640 62 aa7.39□□□□□ -1.23
PDLIM1-202ENST00000477757 DMAC1Q96GE9 116 aa7.38□□□□□ -1.23
PDLIM1-202ENST00000477757 KRTAP5-4Q6L8H1 288 aa7.36□□□□□ -1.23
PDLIM1-202ENST00000477757 HIST1H4AP62805 103 aaKnown RBP7.35□□□□□ -1.23
PDLIM1-202ENST00000477757 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
PDLIM1-202ENST00000477757 ATP5EP2Q5VTU8 51 aa7.33□□□□□ -1.24
PDLIM1-202ENST00000477757 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
PDLIM1-202ENST00000477757 MP68P56378 58 aa7.31□□□□□ -1.24
PDLIM1-202ENST00000477757 ETDBQ3ZM63 59 aa7.29□□□□□ -1.24
PDLIM1-202ENST00000477757 MT1MQ8N339 61 aa7.28□□□□□ -1.24
PDLIM1-202ENST00000477757 KRTAP5-3Q6L8H2 238 aa7.27□□□□□ -1.25
PDLIM1-202ENST00000477757 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
PDLIM1-202ENST00000477757 KRTAP19-5Q3LI72 72 aa7.22□□□□□ -1.25
PDLIM1-202ENST00000477757 OCR1Q9BZK8 76 aa7.22□□□□□ -1.25
PDLIM1-202ENST00000477757 F8W1H4 67 aa7.2□□□□□ -1.26
PDLIM1-202ENST00000477757 TRAV7A0A075B6U4 112 aa7.19□□□□□ -1.26
PDLIM1-202ENST00000477757 COL5A1-AS1Q5SY13 56 aa7.19□□□□□ -1.26
PDLIM1-202ENST00000477757 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
PDLIM1-202ENST00000477757 GTF2H5Q6ZYL4 71 aa7.14□□□□□ -1.27
PDLIM1-202ENST00000477757 MT1LQ93083 61 aa7.13□□□□□ -1.27
PDLIM1-202ENST00000477757 FAM240AA0A1B0GVK7 77 aa7.12□□□□□ -1.27
PDLIM1-202ENST00000477757 H3BPC8 53 aa7.12□□□□□ -1.27
PDLIM1-202ENST00000477757 A0A0D9SG42 100 aa7.11□□□□□ -1.27
PDLIM1-202ENST00000477757 KRTAP4-3Q9BYR4 195 aa7.11□□□□□ -1.27
PDLIM1-202ENST00000477757 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
PDLIM1-202ENST00000477757 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
PDLIM1-202ENST00000477757 SPTSSBQ8NFR3 76 aa7.09□□□□□ -1.27
PDLIM1-202ENST00000477757 KRTAP13-4Q3LI77 160 aa7.08□□□□□ -1.28
PDLIM1-202ENST00000477757 ACYP2P14621 99 aa7.01□□□□□ -1.29
PDLIM1-202ENST00000477757 KRTAP20-2Q3LI61 65 aa6.99□□□□□ -1.29
PDLIM1-202ENST00000477757 LINC00643Q86TS7 51 aa6.98□□□□□ -1.29
PDLIM1-202ENST00000477757 SVIPQ8NHG7 77 aa6.96□□□□□ -1.3
PDLIM1-202ENST00000477757 CHKB-CPT1BH3BT56 60 aa6.88□□□□□ -1.31
PDLIM1-202ENST00000477757 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
PDLIM1-202ENST00000477757 LOC105371267A0A1B0GV96 52 aa6.81□□□□□ -1.32
PDLIM1-202ENST00000477757 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
PDLIM1-202ENST00000477757 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
PDLIM1-202ENST00000477757 AHNAKQ09666 5890 aaKnown RBP6.74□□□□□ -1.33
PDLIM1-202ENST00000477757 SCGB1A1P11684 91 aa6.73□□□□□ -1.33
PDLIM1-202ENST00000477757 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
PDLIM1-202ENST00000477757 KRTAP12-4P60329 112 aa6.72□□□□□ -1.33
PDLIM1-202ENST00000477757 KRTAP4-12Q9BQ66 201 aa6.72□□□□□ -1.33
PDLIM1-202ENST00000477757 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
PDLIM1-202ENST00000477757 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
PDLIM1-202ENST00000477757 SYNE1Q8NF91 8797 aaKnown RBP6.62□□□□□ -1.35
PDLIM1-202ENST00000477757 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
PDLIM1-202ENST00000477757 MUC5ACP98088 5654 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms