RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 C20orf197Q8N268 126 aa7.49□□□□□ -1.21
SEC13-215ENST00000477547 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
SEC13-215ENST00000477547 USH2AO75445 5202 aa7.48□□□□□ -1.21
SEC13-215ENST00000477547 COX7CP15954 63 aa7.45□□□□□ -1.22
SEC13-215ENST00000477547 ANAPC13Q9BS18 74 aa7.44□□□□□ -1.22
SEC13-215ENST00000477547 S4R3F8 94 aa7.44□□□□□ -1.22
SEC13-215ENST00000477547 A8MUN3 132 aa7.43□□□□□ -1.22
SEC13-215ENST00000477547 FCGBPQ9Y6R7 5405 aaPredicted RBP7.39□□□□□ -1.23
SEC13-215ENST00000477547 LCA10Q71F78 164 aa7.38□□□□□ -1.23
SEC13-215ENST00000477547 DMAC1Q96GE9 116 aa7.38□□□□□ -1.23
SEC13-215ENST00000477547 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
SEC13-215ENST00000477547 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
SEC13-215ENST00000477547 KRTAP9-8Q9BYQ0 159 aa7.29□□□□□ -1.24
SEC13-215ENST00000477547 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
SEC13-215ENST00000477547 NDUFC1O43677 76 aa7.27□□□□□ -1.24
SEC13-215ENST00000477547 MT2AP02795 61 aa7.27□□□□□ -1.24
SEC13-215ENST00000477547 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
SEC13-215ENST00000477547 H7BZZ5 65 aa7.25□□□□□ -1.25
SEC13-215ENST00000477547 ACYP2P14621 99 aa7.25□□□□□ -1.25
SEC13-215ENST00000477547 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
SEC13-215ENST00000477547 MT1FP04733 61 aa7.23□□□□□ -1.25
SEC13-215ENST00000477547 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
SEC13-215ENST00000477547 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
SEC13-215ENST00000477547 MACF1Q9UPN3 7388 aaKnown RBP7.19□□□□□ -1.26
SEC13-215ENST00000477547 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
SEC13-215ENST00000477547 SPTSSBQ8NFR3 76 aa7.11□□□□□ -1.27
SEC13-215ENST00000477547 COA5Q86WW8 74 aa7.1□□□□□ -1.27
SEC13-215ENST00000477547 H0YAA0 97 aa7.08□□□□□ -1.28
SEC13-215ENST00000477547 ATP5EP56381 51 aaPredicted RBP7.05□□□□□ -1.28
SEC13-215ENST00000477547 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
SEC13-215ENST00000477547 ADM2Q7Z4H4 148 aa7.03□□□□□ -1.28
SEC13-215ENST00000477547 TMEM258P61165 79 aa7.02□□□□□ -1.28
SEC13-215ENST00000477547 P0C880 135 aa6.93□□□□□ -1.3
SEC13-215ENST00000477547 PCP4P48539 62 aa6.93□□□□□ -1.3
SEC13-215ENST00000477547 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
SEC13-215ENST00000477547 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
SEC13-215ENST00000477547 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
SEC13-215ENST00000477547 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
SEC13-215ENST00000477547 NEBP20929 6669 aa6.88□□□□□ -1.31
SEC13-215ENST00000477547 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
SEC13-215ENST00000477547 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
SEC13-215ENST00000477547 R4GN34 69 aa6.83□□□□□ -1.32
SEC13-215ENST00000477547 M0QZ58 72 aa6.81□□□□□ -1.32
SEC13-215ENST00000477547 SEC61GP60059 68 aa6.8□□□□□ -1.32
SEC13-215ENST00000477547 SERP1Q9Y6X1 66 aa6.79□□□□□ -1.32
SEC13-215ENST00000477547 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
SEC13-215ENST00000477547 Q5VV11 94 aa6.77□□□□□ -1.32
SEC13-215ENST00000477547 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
SEC13-215ENST00000477547 A0A1B0GU69 56 aa6.73□□□□□ -1.33
SEC13-215ENST00000477547 MT1BP07438 61 aa6.73□□□□□ -1.33
SEC13-215ENST00000477547 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
SEC13-215ENST00000477547 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
SEC13-215ENST00000477547 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.35
SEC13-215ENST00000477547 PRR15LQ9BU68 103 aa6.65□□□□□ -1.35
SEC13-215ENST00000477547 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.35
SEC13-215ENST00000477547 A0A1B0GU33 70 aa6.63□□□□□ -1.35
SEC13-215ENST00000477547 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
SEC13-215ENST00000477547 SPATA8Q6RVD6 105 aa6.56□□□□□ -1.36
SEC13-215ENST00000477547 SMIM26A0A096LP01 95 aa6.53□□□□□ -1.36
SEC13-215ENST00000477547 V9GYY9 64 aa6.53□□□□□ -1.36
SEC13-215ENST00000477547 A6NN06 94 aa6.52□□□□□ -1.37
SEC13-215ENST00000477547 RPS28P62857 69 aaKnown RBP6.52□□□□□ -1.37
SEC13-215ENST00000477547 A0A0D9SG42 100 aa6.5□□□□□ -1.37
SEC13-215ENST00000477547 Q1T7F1 81 aa6.5□□□□□ -1.37
SEC13-215ENST00000477547 MDN1Q9NU22 5596 aa6.5□□□□□ -1.37
SEC13-215ENST00000477547 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
SEC13-215ENST00000477547 PSPHP1O15172 72 aa6.46□□□□□ -1.38
SEC13-215ENST00000477547 KMT2DO14686 5537 aa6.43□□□□□ -1.38
SEC13-215ENST00000477547 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
SEC13-215ENST00000477547 UQCR11O14957 56 aa6.42□□□□□ -1.38
SEC13-215ENST00000477547 MT1XP80297 61 aa6.42□□□□□ -1.38
SEC13-215ENST00000477547 A8MU10 97 aa6.41□□□□□ -1.38
SEC13-215ENST00000477547 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
SEC13-215ENST00000477547 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
SEC13-215ENST00000477547 KRTAP12-1P59990 96 aa6.37□□□□□ -1.39
SEC13-215ENST00000477547 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
SEC13-215ENST00000477547 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
SEC13-215ENST00000477547 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
SEC13-215ENST00000477547 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
SEC13-215ENST00000477547 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
SEC13-215ENST00000477547 A6NED7 52 aa6.27□□□□□ -1.41
SEC13-215ENST00000477547 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
SEC13-215ENST00000477547 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
SEC13-215ENST00000477547 K7ERS5 55 aa6.13□□□□□ -1.43
SEC13-215ENST00000477547 SPRR2EP22531 72 aa6.13□□□□□ -1.43
SEC13-215ENST00000477547 SPRR2BP35325 72 aa6.13□□□□□ -1.43
SEC13-215ENST00000477547 SPRR2AP35326 72 aa6.13□□□□□ -1.43
SEC13-215ENST00000477547 KRTAP2-2Q9BYT5 123 aa6.12□□□□□ -1.43
SEC13-215ENST00000477547 KRTAP2-1Q9BYU5 128 aa6.12□□□□□ -1.43
SEC13-215ENST00000477547 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
SEC13-215ENST00000477547 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
SEC13-215ENST00000477547 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
SEC13-215ENST00000477547 GPR98Q8WXG9 6306 aa6.05□□□□□ -1.44
SEC13-215ENST00000477547 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
SEC13-215ENST00000477547 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
SEC13-215ENST00000477547 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
SEC13-215ENST00000477547 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
SEC13-215ENST00000477547 TNP1P09430 55 aa5.96□□□□□ -1.46
SEC13-215ENST00000477547 SPRR2DP22532 72 aa5.93□□□□□ -1.46
SEC13-215ENST00000477547 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms