RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 LCA10Q71F78 164 aa9.78□□□□□ -0.84
CLK2-205ENST00000476983 RPS28P62857 69 aaKnown RBP9.74□□□□□ -0.85
CLK2-205ENST00000476983 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
CLK2-205ENST00000476983 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.85
CLK2-205ENST00000476983 FLGP20930 4061 aaPredicted RBP9.65□□□□□ -0.86
CLK2-205ENST00000476983 SPTSSBQ8NFR3 76 aa9.63□□□□□ -0.87
CLK2-205ENST00000476983 FAT4Q6V0I7 4981 aa9.61□□□□□ -0.87
CLK2-205ENST00000476983 SMIM26A0A096LP01 95 aa9.59□□□□□ -0.87
CLK2-205ENST00000476983 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
CLK2-205ENST00000476983 MT1HP80294 61 aa9.55□□□□□ -0.88
CLK2-205ENST00000476983 M0R2T5 61 aa9.49□□□□□ -0.89
CLK2-205ENST00000476983 LINC01558Q9Y6Z2 57 aa9.45□□□□□ -0.9
CLK2-205ENST00000476983 Q1T7F1 81 aa9.45□□□□□ -0.9
CLK2-205ENST00000476983 V9GYY9 64 aa9.4□□□□□ -0.9
CLK2-205ENST00000476983 PRR15LQ9BU68 103 aa9.4□□□□□ -0.91
CLK2-205ENST00000476983 A0A1B0GU69 56 aa9.38□□□□□ -0.91
CLK2-205ENST00000476983 PSPHP1O15172 72 aa9.38□□□□□ -0.91
CLK2-205ENST00000476983 SEC61GP60059 68 aa9.36□□□□□ -0.91
CLK2-205ENST00000476983 ADM2Q7Z4H4 148 aa9.36□□□□□ -0.91
CLK2-205ENST00000476983 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
CLK2-205ENST00000476983 H0YAA0 97 aa9.3□□□□□ -0.92
CLK2-205ENST00000476983 P0C880 135 aa9.29□□□□□ -0.92
CLK2-205ENST00000476983 KRTAP10-6P60371 365 aaPredicted RBP9.29□□□□□ -0.92
CLK2-205ENST00000476983 LCE2AQ5TA79 106 aaPredicted RBP9.27□□□□□ -0.93
CLK2-205ENST00000476983 Q5VV11 94 aa9.25□□□□□ -0.93
CLK2-205ENST00000476983 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
CLK2-205ENST00000476983 KRTAP9-8Q9BYQ0 159 aa9.16□□□□□ -0.94
CLK2-205ENST00000476983 A0A1B0GU33 70 aa9.15□□□□□ -0.95
CLK2-205ENST00000476983 MT2AP02795 61 aa9.15□□□□□ -0.95
CLK2-205ENST00000476983 MT1FP04733 61 aa9.1□□□□□ -0.95
CLK2-205ENST00000476983 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
CLK2-205ENST00000476983 A6NED7 52 aa9.06□□□□□ -0.96
CLK2-205ENST00000476983 KRTAP13-4Q3LI77 160 aa9.06□□□□□ -0.96
CLK2-205ENST00000476983 SPATA8Q6RVD6 105 aa9.06□□□□□ -0.96
CLK2-205ENST00000476983 UQCR11O14957 56 aa9.04□□□□□ -0.96
CLK2-205ENST00000476983 M0QZ58 72 aa9.02□□□□□ -0.96
CLK2-205ENST00000476983 R4GN34 69 aa9.02□□□□□ -0.97
CLK2-205ENST00000476983 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.98
CLK2-205ENST00000476983 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
CLK2-205ENST00000476983 A8MU10 97 aa8.91□□□□□ -0.98
CLK2-205ENST00000476983 A0A0D9SG42 100 aa8.9□□□□□ -0.98
CLK2-205ENST00000476983 LINC01554Q52M75 96 aa8.9□□□□□ -0.98
CLK2-205ENST00000476983 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
CLK2-205ENST00000476983 BRK1Q8WUW1 75 aa8.85□□□□□ -0.99
CLK2-205ENST00000476983 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
CLK2-205ENST00000476983 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
CLK2-205ENST00000476983 SPRR2GQ9BYE4 73 aa8.83□□□□□ -1
CLK2-205ENST00000476983 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
CLK2-205ENST00000476983 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
CLK2-205ENST00000476983 KRTAP12-2P59991 146 aa8.66□□□□□ -1.02
CLK2-205ENST00000476983 LCE2BO14633 110 aa8.64□□□□□ -1.03
CLK2-205ENST00000476983 KRTAP19-8Q3LI54 63 aa8.62□□□□□ -1.03
CLK2-205ENST00000476983 A6NN06 94 aa8.6□□□□□ -1.03
CLK2-205ENST00000476983 MT1BP07438 61 aa8.56□□□□□ -1.04
CLK2-205ENST00000476983 K7ERS5 55 aa8.55□□□□□ -1.04
CLK2-205ENST00000476983 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
CLK2-205ENST00000476983 PRO0628Q9UI54 55 aa8.5□□□□□ -1.05
CLK2-205ENST00000476983 USH2AO75445 5202 aa8.45□□□□□ -1.06
CLK2-205ENST00000476983 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
CLK2-205ENST00000476983 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
CLK2-205ENST00000476983 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
CLK2-205ENST00000476983 KRTAP9-2Q9BYQ4 174 aa8.27□□□□□ -1.09
CLK2-205ENST00000476983 MT1XP80297 61 aa8.25□□□□□ -1.09
CLK2-205ENST00000476983 KRTAP10-5P60370 271 aa8.23□□□□□ -1.09
CLK2-205ENST00000476983 C10orf95Q9H7T3 257 aa8.23□□□□□ -1.09
CLK2-205ENST00000476983 SSPOA2VEC9 5147 aa8.2□□□□□ -1.1
CLK2-205ENST00000476983 ROMO1P60602 79 aa8.19□□□□□ -1.1
CLK2-205ENST00000476983 FSIP2Q5CZC0 6907 aa8.19□□□□□ -1.1
CLK2-205ENST00000476983 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
CLK2-205ENST00000476983 KRTAP19-6Q3LI70 58 aa8.11□□□□□ -1.11
CLK2-205ENST00000476983 TNP1P09430 55 aa7.97□□□□□ -1.13
CLK2-205ENST00000476983 KRTAP10-7P60409 375 aaPredicted RBP7.94□□□□□ -1.14
CLK2-205ENST00000476983 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
CLK2-205ENST00000476983 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
CLK2-205ENST00000476983 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
CLK2-205ENST00000476983 PRAC1Q96KF2 57 aa7.89□□□□□ -1.15
CLK2-205ENST00000476983 FCGBPQ9Y6R7 5405 aaPredicted RBP7.88□□□□□ -1.15
CLK2-205ENST00000476983 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
CLK2-205ENST00000476983 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
CLK2-205ENST00000476983 KMT2DO14686 5537 aa7.7□□□□□ -1.18
CLK2-205ENST00000476983 KRTAP4-8A0A0G2JLE6 195 aa7.68□□□□□ -1.18
CLK2-205ENST00000476983 KRTAP4-8Q9BYQ9 185 aa7.68□□□□□ -1.18
CLK2-205ENST00000476983 KRTAP9-6A0A140TA67 174 aa7.67□□□□□ -1.18
CLK2-205ENST00000476983 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
CLK2-205ENST00000476983 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
CLK2-205ENST00000476983 SVIPQ8NHG7 77 aa7.55□□□□□ -1.2
CLK2-205ENST00000476983 MACF1Q9UPN3 7388 aaKnown RBP7.49□□□□□ -1.21
CLK2-205ENST00000476983 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
CLK2-205ENST00000476983 KRTAP19-5Q3LI72 72 aa7.44□□□□□ -1.22
CLK2-205ENST00000476983 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
CLK2-205ENST00000476983 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
CLK2-205ENST00000476983 KRTAP19-7Q3SYF9 63 aa7.36□□□□□ -1.23
CLK2-205ENST00000476983 SYNE2Q8WXH0 6885 aaKnown RBP7.31□□□□□ -1.24
CLK2-205ENST00000476983 MT1EP04732 61 aa7.24□□□□□ -1.25
CLK2-205ENST00000476983 SPRR2FQ96RM1 72 aa7.24□□□□□ -1.25
CLK2-205ENST00000476983 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
CLK2-205ENST00000476983 KRTAP5-9P26371 169 aa7.15□□□□□ -1.27
CLK2-205ENST00000476983 MUC12Q9UKN1 5478 aa7.13□□□□□ -1.27
CLK2-205ENST00000476983 KRTAP6-3Q3LI67 103 aa7.11□□□□□ -1.27
CLK2-205ENST00000476983 MT1LQ93083 61 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms