RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 S4R3F8 94 aa14.28□□□□□ -0.12
VEGFA-211ENST00000476772 LCA10Q71F78 164 aa14.25□□□□□ -0.13
VEGFA-211ENST00000476772 SMIM26A0A096LP01 95 aa14.2□□□□□ -0.14
VEGFA-211ENST00000476772 KRTAP3-3Q9BYR6 98 aa14.18□□□□□ -0.14
VEGFA-211ENST00000476772 SPTSSBQ8NFR3 76 aa14.13□□□□□ -0.15
VEGFA-211ENST00000476772 LCE2CQ5TA81 110 aa14.1□□□□□ -0.15
VEGFA-211ENST00000476772 FLGP20930 4061 aaPredicted RBP14.04□□□□□ -0.16
VEGFA-211ENST00000476772 Q1T7F1 81 aa13.97□□□□□ -0.17
VEGFA-211ENST00000476772 CSAG1Q6PB30 78 aa13.95□□□□□ -0.18
VEGFA-211ENST00000476772 FAT4Q6V0I7 4981 aa13.93□□□□□ -0.18
VEGFA-211ENST00000476772 LINC01558Q9Y6Z2 57 aa13.93□□□□□ -0.18
VEGFA-211ENST00000476772 V9GYY9 64 aa13.91□□□□□ -0.18
VEGFA-211ENST00000476772 MT1HP80294 61 aa13.83□□□□□ -0.2
VEGFA-211ENST00000476772 PRR15LQ9BU68 103 aa13.79□□□□□ -0.2
VEGFA-211ENST00000476772 A0A1B0GU69 56 aa13.78□□□□□ -0.2
VEGFA-211ENST00000476772 PSPHP1O15172 72 aa13.77□□□□□ -0.21
VEGFA-211ENST00000476772 SEC61GP60059 68 aa13.72□□□□□ -0.21
VEGFA-211ENST00000476772 M0R2T5 61 aa13.68□□□□□ -0.22
VEGFA-211ENST00000476772 Q5VV11 94 aa13.65□□□□□ -0.22
VEGFA-211ENST00000476772 ADM2Q7Z4H4 148 aa13.63□□□□□ -0.23
VEGFA-211ENST00000476772 KRTAP3-2Q9BYR7 98 aa13.63□□□□□ -0.23
VEGFA-211ENST00000476772 H0YAA0 97 aa13.62□□□□□ -0.23
VEGFA-211ENST00000476772 KRTAP10-6P60371 365 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-211ENST00000476772 P0C880 135 aa13.54□□□□□ -0.24
VEGFA-211ENST00000476772 A0A1B0GU33 70 aa13.41□□□□□ -0.26
VEGFA-211ENST00000476772 LCE2AQ5TA79 106 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-211ENST00000476772 A6NED7 52 aa13.34□□□□□ -0.27
VEGFA-211ENST00000476772 UQCR11O14957 56 aa13.31□□□□□ -0.28
VEGFA-211ENST00000476772 KRTAP9-8Q9BYQ0 159 aa13.29□□□□□ -0.28
VEGFA-211ENST00000476772 LORP23490 312 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-211ENST00000476772 MT2AP02795 61 aa13.24□□□□□ -0.29
VEGFA-211ENST00000476772 KRTAP13-4Q3LI77 160 aa13.23□□□□□ -0.29
VEGFA-211ENST00000476772 SPATA8Q6RVD6 105 aa13.22□□□□□ -0.29
VEGFA-211ENST00000476772 MT1FP04733 61 aa13.18□□□□□ -0.3
VEGFA-211ENST00000476772 MIR22HGQ0VDD5 57 aa13.17□□□□□ -0.3
VEGFA-211ENST00000476772 R4GN34 69 aa13.15□□□□□ -0.31
VEGFA-211ENST00000476772 M0QZ58 72 aa13.13□□□□□ -0.31
VEGFA-211ENST00000476772 KRTAP10-10P60014 251 aa13.12□□□□□ -0.31
VEGFA-211ENST00000476772 BRK1Q8WUW1 75 aa13.07□□□□□ -0.32
VEGFA-211ENST00000476772 CRIPTQ9P021 101 aa13.07□□□□□ -0.32
VEGFA-211ENST00000476772 CDC42SE1Q9NRR8 79 aa13.06□□□□□ -0.32
VEGFA-211ENST00000476772 A8MU10 97 aa13.05□□□□□ -0.32
VEGFA-211ENST00000476772 A0A0D9SG42 100 aa12.96□□□□□ -0.33
VEGFA-211ENST00000476772 LINC01554Q52M75 96 aa12.92□□□□□ -0.34
VEGFA-211ENST00000476772 KRTAP19-1Q8IUB9 90 aa12.87□□□□□ -0.35
VEGFA-211ENST00000476772 SPRR2GQ9BYE4 73 aa12.87□□□□□ -0.35
VEGFA-211ENST00000476772 KRTAP9-3Q9BYQ3 159 aa12.81□□□□□ -0.36
VEGFA-211ENST00000476772 KRTAP12-1P59990 96 aa12.7□□□□□ -0.38
VEGFA-211ENST00000476772 SVIPQ8NHG7 77 aa12.69□□□□□ -0.38
VEGFA-211ENST00000476772 KRTAP12-2P59991 146 aa12.67□□□□□ -0.38
VEGFA-211ENST00000476772 SPINT4Q6UDR6 99 aa12.66□□□□□ -0.38
VEGFA-211ENST00000476772 PRO0628Q9UI54 55 aa12.66□□□□□ -0.38
VEGFA-211ENST00000476772 A6NN06 94 aa12.62□□□□□ -0.39
VEGFA-211ENST00000476772 K7ERS5 55 aa12.56□□□□□ -0.4
VEGFA-211ENST00000476772 KRTAP19-8Q3LI54 63 aa12.56□□□□□ -0.4
VEGFA-211ENST00000476772 LCE2BO14633 110 aa12.5□□□□□ -0.41
VEGFA-211ENST00000476772 MT1BP07438 61 aa12.44□□□□□ -0.42
VEGFA-211ENST00000476772 PLAC4Q8WY50 150 aa12.41□□□□□ -0.42
VEGFA-211ENST00000476772 PMAIP1Q13794 54 aa12.33□□□□□ -0.44
VEGFA-211ENST00000476772 CAMK2N1Q7Z7J9 78 aa12.29□□□□□ -0.44
VEGFA-211ENST00000476772 USH2AO75445 5202 aa12.21□□□□□ -0.46
VEGFA-211ENST00000476772 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-211ENST00000476772 ROMO1P60602 79 aa12.04□□□□□ -0.48
VEGFA-211ENST00000476772 C10orf95Q9H7T3 257 aa12.03□□□□□ -0.48
VEGFA-211ENST00000476772 MT1XP80297 61 aa12□□□□□ -0.49
VEGFA-211ENST00000476772 KRTAP10-5P60370 271 aa11.97□□□□□ -0.49
VEGFA-211ENST00000476772 SSPOA2VEC9 5147 aa11.84□□□□□ -0.51
VEGFA-211ENST00000476772 KRTAP9-2Q9BYQ4 174 aa11.84□□□□□ -0.51
VEGFA-211ENST00000476772 PRO2289Q9P1D8 64 aa11.84□□□□□ -0.51
VEGFA-211ENST00000476772 KTN1-AS1Q86SY8 53 aa11.76□□□□□ -0.53
VEGFA-211ENST00000476772 KRTAP19-6Q3LI70 58 aa11.75□□□□□ -0.53
VEGFA-211ENST00000476772 FSIP2Q5CZC0 6907 aa11.73□□□□□ -0.53
VEGFA-211ENST00000476772 TNP1P09430 55 aa11.66□□□□□ -0.54
VEGFA-211ENST00000476772 KRTAP25-1Q3LHN0 102 aa11.64□□□□□ -0.55
VEGFA-211ENST00000476772 PRAC1Q96KF2 57 aa11.62□□□□□ -0.55
VEGFA-211ENST00000476772 KRTAP10-7P60409 375 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-211ENST00000476772 CRCT1Q9UGL9 99 aa11.39□□□□□ -0.59
VEGFA-211ENST00000476772 FCGBPQ9Y6R7 5405 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-211ENST00000476772 KRTAP10-12P60413 245 aa11.35□□□□□ -0.59
VEGFA-211ENST00000476772 LCE3AQ5TA76 89 aa11.24□□□□□ -0.61
VEGFA-211ENST00000476772 KRTAP23-1A1A580 65 aa11.21□□□□□ -0.61
VEGFA-211ENST00000476772 PP632Q6XCG6 107 aa11.19□□□□□ -0.62
VEGFA-211ENST00000476772 KMT2DO14686 5537 aa11.12□□□□□ -0.63
VEGFA-211ENST00000476772 KRTAP4-8A0A0G2JLE6 195 aa11.11□□□□□ -0.63
VEGFA-211ENST00000476772 KRTAP4-8Q9BYQ9 185 aa11.11□□□□□ -0.63
VEGFA-211ENST00000476772 KRTAP8-1Q8IUC2 63 aa10.96□□□□□ -0.65
VEGFA-211ENST00000476772 KRTAP9-6A0A140TA67 174 aa10.95□□□□□ -0.66
VEGFA-211ENST00000476772 KRTAP19-5Q3LI72 72 aa10.8□□□□□ -0.68
VEGFA-211ENST00000476772 MACF1Q9UPN3 7388 aaKnown RBP10.79□□□□□ -0.68
VEGFA-211ENST00000476772 KRTAP12-3P60328 96 aa10.77□□□□□ -0.69
VEGFA-211ENST00000476772 KRTAP19-7Q3SYF9 63 aa10.7□□□□□ -0.7
VEGFA-211ENST00000476772 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.55□□□□□ -0.72
VEGFA-211ENST00000476772 MT1EP04732 61 aa10.52□□□□□ -0.73
VEGFA-211ENST00000476772 KRTAP15-1Q3LI76 137 aa10.5□□□□□ -0.73
VEGFA-211ENST00000476772 SYNE2Q8WXH0 6885 aaKnown RBP10.47□□□□□ -0.73
VEGFA-211ENST00000476772 SPRR2FQ96RM1 72 aa10.44□□□□□ -0.74
VEGFA-211ENST00000476772 KRTAP5-9P26371 169 aa10.35□□□□□ -0.75
VEGFA-211ENST00000476772 MUC12Q9UKN1 5478 aa10.3□□□□□ -0.76
VEGFA-211ENST00000476772 MT1LQ93083 61 aa10.28□□□□□ -0.76
VEGFA-211ENST00000476772 KRTAP6-3Q3LI67 103 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms