RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 H7BZZ5 65 aa7.08□□□□□ -1.28
CCNL1-217ENST00000476367 C5orf47Q569G3 176 aa7.08□□□□□ -1.28
CCNL1-217ENST00000476367 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
CCNL1-217ENST00000476367 LINC00208Q96KT6 92 aa7.08□□□□□ -1.28
CCNL1-217ENST00000476367 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
CCNL1-217ENST00000476367 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
CCNL1-217ENST00000476367 MP68P56378 58 aa7.02□□□□□ -1.29
CCNL1-217ENST00000476367 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
CCNL1-217ENST00000476367 ATP5EP56381 51 aaPredicted RBP7.01□□□□□ -1.29
CCNL1-217ENST00000476367 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
CCNL1-217ENST00000476367 H3BPC8 53 aa7□□□□□ -1.29
CCNL1-217ENST00000476367 KRTAP9-8Q9BYQ0 159 aa6.96□□□□□ -1.3
CCNL1-217ENST00000476367 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
CCNL1-217ENST00000476367 MT2AP02795 61 aa6.91□□□□□ -1.3
CCNL1-217ENST00000476367 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
CCNL1-217ENST00000476367 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
CCNL1-217ENST00000476367 S4R3F8 94 aa6.87□□□□□ -1.31
CCNL1-217ENST00000476367 MT1FP04733 61 aa6.87□□□□□ -1.31
CCNL1-217ENST00000476367 LCA10Q71F78 164 aa6.87□□□□□ -1.31
CCNL1-217ENST00000476367 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
CCNL1-217ENST00000476367 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
CCNL1-217ENST00000476367 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
CCNL1-217ENST00000476367 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
CCNL1-217ENST00000476367 A8MUN3 132 aa6.81□□□□□ -1.32
CCNL1-217ENST00000476367 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
CCNL1-217ENST00000476367 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
CCNL1-217ENST00000476367 CSAG1Q6PB30 78 aa6.76□□□□□ -1.33
CCNL1-217ENST00000476367 KRTAP9-9Q9BYP9 154 aa6.76□□□□□ -1.33
CCNL1-217ENST00000476367 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
CCNL1-217ENST00000476367 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
CCNL1-217ENST00000476367 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
CCNL1-217ENST00000476367 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
CCNL1-217ENST00000476367 ACYP2P14621 99 aa6.65□□□□□ -1.34
CCNL1-217ENST00000476367 USH2AO75445 5202 aa6.65□□□□□ -1.34
CCNL1-217ENST00000476367 COA5Q86WW8 74 aa6.61□□□□□ -1.35
CCNL1-217ENST00000476367 Q1T7F1 81 aa6.59□□□□□ -1.35
CCNL1-217ENST00000476367 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
CCNL1-217ENST00000476367 H0YAA0 97 aa6.57□□□□□ -1.36
CCNL1-217ENST00000476367 V9GYY9 64 aa6.57□□□□□ -1.36
CCNL1-217ENST00000476367 ADM2Q7Z4H4 148 aa6.5□□□□□ -1.37
CCNL1-217ENST00000476367 P0C880 135 aa6.48□□□□□ -1.37
CCNL1-217ENST00000476367 CHKB-CPT1BH3BT56 60 aa6.47□□□□□ -1.37
CCNL1-217ENST00000476367 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
CCNL1-217ENST00000476367 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
CCNL1-217ENST00000476367 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
CCNL1-217ENST00000476367 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
CCNL1-217ENST00000476367 CRIPTQ9P021 101 aa6.43□□□□□ -1.38
CCNL1-217ENST00000476367 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
CCNL1-217ENST00000476367 PSPHP1O15172 72 aa6.39□□□□□ -1.39
CCNL1-217ENST00000476367 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
CCNL1-217ENST00000476367 Q5VV11 94 aa6.38□□□□□ -1.39
CCNL1-217ENST00000476367 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
CCNL1-217ENST00000476367 KRTAP19-8Q3LI54 63 aa6.37□□□□□ -1.39
CCNL1-217ENST00000476367 MT1BP07438 61 aa6.36□□□□□ -1.39
CCNL1-217ENST00000476367 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
CCNL1-217ENST00000476367 PRO0628Q9UI54 55 aa6.32□□□□□ -1.4
CCNL1-217ENST00000476367 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
CCNL1-217ENST00000476367 R4GN34 69 aa6.31□□□□□ -1.4
CCNL1-217ENST00000476367 BRK1Q8WUW1 75 aa6.3□□□□□ -1.4
CCNL1-217ENST00000476367 M0QZ58 72 aa6.28□□□□□ -1.4
CCNL1-217ENST00000476367 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
CCNL1-217ENST00000476367 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
CCNL1-217ENST00000476367 A0A1B0GU69 56 aa6.23□□□□□ -1.41
CCNL1-217ENST00000476367 A6NED7 52 aa6.22□□□□□ -1.41
CCNL1-217ENST00000476367 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
CCNL1-217ENST00000476367 A6NN06 94 aa6.2□□□□□ -1.42
CCNL1-217ENST00000476367 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
CCNL1-217ENST00000476367 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
CCNL1-217ENST00000476367 KRTAP4-2Q9BYR5 136 aa6.17□□□□□ -1.42
CCNL1-217ENST00000476367 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
CCNL1-217ENST00000476367 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
CCNL1-217ENST00000476367 SEC61GP60059 68 aa6.14□□□□□ -1.43
CCNL1-217ENST00000476367 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
CCNL1-217ENST00000476367 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
CCNL1-217ENST00000476367 A8MU10 97 aa6.1□□□□□ -1.43
CCNL1-217ENST00000476367 A0A1B0GU33 70 aa6.1□□□□□ -1.43
CCNL1-217ENST00000476367 UQCR11O14957 56 aa6.1□□□□□ -1.43
CCNL1-217ENST00000476367 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
CCNL1-217ENST00000476367 MT1XP80297 61 aa6.05□□□□□ -1.44
CCNL1-217ENST00000476367 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
CCNL1-217ENST00000476367 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
CCNL1-217ENST00000476367 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
CCNL1-217ENST00000476367 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
CCNL1-217ENST00000476367 A0A0D9SG42 100 aa5.97□□□□□ -1.45
CCNL1-217ENST00000476367 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
CCNL1-217ENST00000476367 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
CCNL1-217ENST00000476367 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
CCNL1-217ENST00000476367 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
CCNL1-217ENST00000476367 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
CCNL1-217ENST00000476367 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
CCNL1-217ENST00000476367 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
CCNL1-217ENST00000476367 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
CCNL1-217ENST00000476367 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
CCNL1-217ENST00000476367 KMT2DO14686 5537 aa5.81□□□□□ -1.48
CCNL1-217ENST00000476367 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
CCNL1-217ENST00000476367 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
CCNL1-217ENST00000476367 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
CCNL1-217ENST00000476367 K7ERS5 55 aa5.74□□□□□ -1.49
CCNL1-217ENST00000476367 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
CCNL1-217ENST00000476367 H3BS24 57 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms