RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 H3BPC8 53 aa7.3□□□□□ -1.24
SNX13-207ENST00000475800 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
SNX13-207ENST00000475800 KRTAP9-7A8MTY7 169 aa7.28□□□□□ -1.24
SNX13-207ENST00000475800 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
SNX13-207ENST00000475800 SMIM20Q8N5G0 67 aa7.26□□□□□ -1.25
SNX13-207ENST00000475800 MT2AP02795 61 aa7.25□□□□□ -1.25
SNX13-207ENST00000475800 FAM236AA0A1B0GUQ0 79 aa7.24□□□□□ -1.25
SNX13-207ENST00000475800 FAM236BA0A1B0GV22 79 aa7.24□□□□□ -1.25
SNX13-207ENST00000475800 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
SNX13-207ENST00000475800 S4R3F8 94 aa7.24□□□□□ -1.25
SNX13-207ENST00000475800 TRAV7A0A075B6U4 112 aa7.2□□□□□ -1.26
SNX13-207ENST00000475800 A8MUN3 132 aa7.2□□□□□ -1.26
SNX13-207ENST00000475800 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
SNX13-207ENST00000475800 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
SNX13-207ENST00000475800 MT1FP04733 61 aa7.18□□□□□ -1.26
SNX13-207ENST00000475800 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
SNX13-207ENST00000475800 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
SNX13-207ENST00000475800 LCA10Q71F78 164 aa7.17□□□□□ -1.26
SNX13-207ENST00000475800 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
SNX13-207ENST00000475800 KRTAP4-12Q9BQ66 201 aa7.15□□□□□ -1.26
SNX13-207ENST00000475800 KRTAP9-9Q9BYP9 154 aa7.15□□□□□ -1.26
SNX13-207ENST00000475800 KRTAP9-4Q9BYQ2 154 aa7.15□□□□□ -1.26
SNX13-207ENST00000475800 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
SNX13-207ENST00000475800 KRTAP9-3Q9BYQ3 159 aa7.1□□□□□ -1.27
SNX13-207ENST00000475800 NDUFC1O43677 76 aa7.07□□□□□ -1.28
SNX13-207ENST00000475800 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
SNX13-207ENST00000475800 DMAC1Q96GE9 116 aa7.04□□□□□ -1.28
SNX13-207ENST00000475800 SNURFQ9Y675 71 aa6.98□□□□□ -1.29
SNX13-207ENST00000475800 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
SNX13-207ENST00000475800 ACYP2P14621 99 aa6.95□□□□□ -1.3
SNX13-207ENST00000475800 H0YAA0 97 aa6.94□□□□□ -1.3
SNX13-207ENST00000475800 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
SNX13-207ENST00000475800 V9GYY9 64 aa6.92□□□□□ -1.3
SNX13-207ENST00000475800 COX7CP15954 63 aa6.9□□□□□ -1.3
SNX13-207ENST00000475800 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
SNX13-207ENST00000475800 KRTAP19-6Q3LI70 58 aa6.88□□□□□ -1.31
SNX13-207ENST00000475800 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
SNX13-207ENST00000475800 SYNE2Q8WXH0 6885 aaKnown RBP6.88□□□□□ -1.31
SNX13-207ENST00000475800 MACF1Q9UPN3 7388 aaKnown RBP6.87□□□□□ -1.31
SNX13-207ENST00000475800 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
SNX13-207ENST00000475800 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
SNX13-207ENST00000475800 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
SNX13-207ENST00000475800 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
SNX13-207ENST00000475800 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
SNX13-207ENST00000475800 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
SNX13-207ENST00000475800 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
SNX13-207ENST00000475800 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
SNX13-207ENST00000475800 Q5VV11 94 aa6.74□□□□□ -1.33
SNX13-207ENST00000475800 H7BZZ5 65 aa6.72□□□□□ -1.33
SNX13-207ENST00000475800 KRTAP6-3Q3LI67 103 aa6.7□□□□□ -1.34
SNX13-207ENST00000475800 P0C880 135 aa6.68□□□□□ -1.34
SNX13-207ENST00000475800 MT1BP07438 61 aa6.67□□□□□ -1.34
SNX13-207ENST00000475800 COA5Q86WW8 74 aa6.67□□□□□ -1.34
SNX13-207ENST00000475800 CYSTM1Q9H1C7 97 aa6.67□□□□□ -1.34
SNX13-207ENST00000475800 R4GN34 69 aa6.67□□□□□ -1.34
SNX13-207ENST00000475800 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
SNX13-207ENST00000475800 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
SNX13-207ENST00000475800 KRTAP4-2Q9BYR5 136 aa6.61□□□□□ -1.35
SNX13-207ENST00000475800 M0QZ58 72 aa6.6□□□□□ -1.35
SNX13-207ENST00000475800 A6NN06 94 aa6.56□□□□□ -1.36
SNX13-207ENST00000475800 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
SNX13-207ENST00000475800 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
SNX13-207ENST00000475800 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
SNX13-207ENST00000475800 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
SNX13-207ENST00000475800 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
SNX13-207ENST00000475800 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
SNX13-207ENST00000475800 NEBP20929 6669 aa6.45□□□□□ -1.38
SNX13-207ENST00000475800 TMEM258P61165 79 aa6.45□□□□□ -1.38
SNX13-207ENST00000475800 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
SNX13-207ENST00000475800 KRTAP20-1Q3LI63 56 aa6.37□□□□□ -1.39
SNX13-207ENST00000475800 A0A1B0GU69 56 aa6.35□□□□□ -1.39
SNX13-207ENST00000475800 PRO0628Q9UI54 55 aa6.35□□□□□ -1.39
SNX13-207ENST00000475800 A0A1B0GU33 70 aa6.33□□□□□ -1.4
SNX13-207ENST00000475800 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
SNX13-207ENST00000475800 KRTAP4-11Q9BYQ6 195 aa6.33□□□□□ -1.4
SNX13-207ENST00000475800 MT1XP80297 61 aa6.32□□□□□ -1.4
SNX13-207ENST00000475800 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
SNX13-207ENST00000475800 KMT2DO14686 5537 aa6.31□□□□□ -1.4
SNX13-207ENST00000475800 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
SNX13-207ENST00000475800 KRTAP5-9P26371 169 aa6.26□□□□□ -1.41
SNX13-207ENST00000475800 LINC01558Q9Y6Z2 57 aa6.23□□□□□ -1.41
SNX13-207ENST00000475800 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
SNX13-207ENST00000475800 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
SNX13-207ENST00000475800 A0A0D9SG42 100 aa6.19□□□□□ -1.42
SNX13-207ENST00000475800 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
SNX13-207ENST00000475800 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
SNX13-207ENST00000475800 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
SNX13-207ENST00000475800 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
SNX13-207ENST00000475800 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
SNX13-207ENST00000475800 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.42
SNX13-207ENST00000475800 SPRR2EP22531 72 aa6.11□□□□□ -1.43
SNX13-207ENST00000475800 SPRR2BP35325 72 aa6.11□□□□□ -1.43
SNX13-207ENST00000475800 SPRR2AP35326 72 aa6.11□□□□□ -1.43
SNX13-207ENST00000475800 PMAIP1Q13794 54 aa6.11□□□□□ -1.43
SNX13-207ENST00000475800 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
SNX13-207ENST00000475800 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
SNX13-207ENST00000475800 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
SNX13-207ENST00000475800 PSPHP1O15172 72 aa6.08□□□□□ -1.44
SNX13-207ENST00000475800 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
SNX13-207ENST00000475800 UQCR11O14957 56 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms