RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 NISCHQ9Y2I1 1504 aa36.36■■■■□ 3.41
SNX13-207ENST00000475800 ABCC9O60706 1549 aa32.37■■■□□ 2.77
SNX13-207ENST00000475800 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
SNX13-207ENST00000475800 RB1CC1Q8TDY2 1594 aa30.65■■■□□ 2.5
SNX13-207ENST00000475800 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
SNX13-207ENST00000475800 NACADO15069 1562 aa30.39■■■□□ 2.46
SNX13-207ENST00000475800 DNAJC5BQ9UF47 199 aa30.37■■■□□ 2.45
SNX13-207ENST00000475800 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
SNX13-207ENST00000475800 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
SNX13-207ENST00000475800 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
SNX13-207ENST00000475800 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
SNX13-207ENST00000475800 UNC13AQ9UPW8 1703 aa30.01■■■□□ 2.39
SNX13-207ENST00000475800 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
SNX13-207ENST00000475800 SCRIBQ14160 1630 aa29.48■■■□□ 2.31
SNX13-207ENST00000475800 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
SNX13-207ENST00000475800 CC2D2AQ9P2K1 1620 aa29.16■■■□□ 2.26
SNX13-207ENST00000475800 CECR2Q9BXF3 1484 aa29.09■■■□□ 2.25
SNX13-207ENST00000475800 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
SNX13-207ENST00000475800 BAZ1AQ9NRL2 1556 aaPredicted RBP28.21■■■□□ 2.11
SNX13-207ENST00000475800 SMARCA4P51532 1647 aa28.19■■■□□ 2.1
SNX13-207ENST00000475800 NCAPD3P42695 1498 aa28.07■■■□□ 2.08
SNX13-207ENST00000475800 ATAD2BQ9ULI0 1458 aa28.04■■■□□ 2.08
SNX13-207ENST00000475800 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
SNX13-207ENST00000475800 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
SNX13-207ENST00000475800 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
SNX13-207ENST00000475800 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
SNX13-207ENST00000475800 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
SNX13-207ENST00000475800 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
SNX13-207ENST00000475800 DNAJC5Q9H3Z4 198 aa27.8■■■□□ 2.04
SNX13-207ENST00000475800 NESP48681 1621 aa27.8■■■□□ 2.04
SNX13-207ENST00000475800 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
SNX13-207ENST00000475800 CUX2O14529 1486 aa27.72■■■□□ 2.03
SNX13-207ENST00000475800 WIZO95785 1651 aa27.71■■■□□ 2.03
SNX13-207ENST00000475800 TOP2AP11388 1531 aaKnown RBP27.47■■□□□ 1.99
SNX13-207ENST00000475800 LAMC3Q9Y6N6 1575 aa27.44■■□□□ 1.98
SNX13-207ENST00000475800 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.98
SNX13-207ENST00000475800 KIF21AQ7Z4S6 1674 aa27.39■■□□□ 1.97
SNX13-207ENST00000475800 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.96
SNX13-207ENST00000475800 CADPSQ9ULU8 1353 aa27.27■■□□□ 1.96
SNX13-207ENST00000475800 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
SNX13-207ENST00000475800 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
SNX13-207ENST00000475800 CCDC88BA6NC98 1476 aa27.1■■□□□ 1.93
SNX13-207ENST00000475800 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
SNX13-207ENST00000475800 CFTRP13569 1480 aa27.01■■□□□ 1.91
SNX13-207ENST00000475800 WDR62O43379 1518 aa27■■□□□ 1.91
SNX13-207ENST00000475800 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
SNX13-207ENST00000475800 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
SNX13-207ENST00000475800 TRIM41Q8WV44 630 aa26.81■■□□□ 1.88
SNX13-207ENST00000475800 URB2Q14146 1524 aaKnown RBP26.77■■□□□ 1.88
SNX13-207ENST00000475800 OSCARQ8IYS5 282 aa26.57■■□□□ 1.84
SNX13-207ENST00000475800 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
SNX13-207ENST00000475800 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
SNX13-207ENST00000475800 TOPBP1Q92547 1522 aa26.48■■□□□ 1.83
SNX13-207ENST00000475800 IFT140Q96RY7 1462 aa26.43■■□□□ 1.82
SNX13-207ENST00000475800 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
SNX13-207ENST00000475800 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
SNX13-207ENST00000475800 AQRO60306 1485 aaKnown RBP eCLIP26.28■■□□□ 1.8
SNX13-207ENST00000475800 CUX1P39880 1505 aa26.26■■□□□ 1.79
SNX13-207ENST00000475800 FBLN2P98095 1184 aa26.22■■□□□ 1.79
SNX13-207ENST00000475800 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
SNX13-207ENST00000475800 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
SNX13-207ENST00000475800 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
SNX13-207ENST00000475800 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
SNX13-207ENST00000475800 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
SNX13-207ENST00000475800 RAD54L2Q9Y4B4 1467 aa26.19■■□□□ 1.78
SNX13-207ENST00000475800 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
SNX13-207ENST00000475800 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
SNX13-207ENST00000475800 CHD1O14646 1710 aa26.14■■□□□ 1.77
SNX13-207ENST00000475800 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.77
SNX13-207ENST00000475800 TOP2BQ02880 1626 aa26.13■■□□□ 1.77
SNX13-207ENST00000475800 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
SNX13-207ENST00000475800 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
SNX13-207ENST00000475800 SOGA1O94964 1423 aa26.12■■□□□ 1.77
SNX13-207ENST00000475800 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
SNX13-207ENST00000475800 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
SNX13-207ENST00000475800 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
SNX13-207ENST00000475800 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
SNX13-207ENST00000475800 ABCA10Q8WWZ4 1543 aa25.94■■□□□ 1.74
SNX13-207ENST00000475800 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
SNX13-207ENST00000475800 ARAP1Q96P48 1450 aa25.87■■□□□ 1.73
SNX13-207ENST00000475800 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
SNX13-207ENST00000475800 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
SNX13-207ENST00000475800 TRHP20396 242 aaPredicted RBP25.82■■□□□ 1.72
SNX13-207ENST00000475800 GAPVD1Q14C86 1478 aa25.8■■□□□ 1.72
SNX13-207ENST00000475800 MAGI1Q96QZ7 1491 aaPredicted RBP25.8■■□□□ 1.72
SNX13-207ENST00000475800 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
SNX13-207ENST00000475800 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
SNX13-207ENST00000475800 SYNJ2O15056 1496 aa25.74■■□□□ 1.71
SNX13-207ENST00000475800 ERICH3Q5RHP9 1530 aa25.66■■□□□ 1.7
SNX13-207ENST00000475800 KIF27Q86VH2 1401 aa25.64■■□□□ 1.7
SNX13-207ENST00000475800 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
SNX13-207ENST00000475800 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
SNX13-207ENST00000475800 GRIN2AQ12879 1464 aa25.53■■□□□ 1.68
SNX13-207ENST00000475800 CUL7Q14999 1698 aa25.48■■□□□ 1.67
SNX13-207ENST00000475800 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
SNX13-207ENST00000475800 IGF1RP08069 1367 aa25.46■■□□□ 1.67
SNX13-207ENST00000475800 CEP170Q5SW79 1584 aa25.45■■□□□ 1.66
SNX13-207ENST00000475800 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
SNX13-207ENST00000475800 NUP160Q12769 1436 aa25.39■■□□□ 1.66
SNX13-207ENST00000475800 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms