RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TP53AIP1Q9HCN2 124 aa8.6□□□□□ -1.03
VPS36-203ENST00000475375 BATFQ16520 125 aa8.59□□□□□ -1.03
VPS36-203ENST00000475375 MT1XP80297 61 aa8.58□□□□□ -1.04
VPS36-203ENST00000475375 UBL5Q9BZL1 73 aa8.58□□□□□ -1.04
VPS36-203ENST00000475375 A8MUN3 132 aa8.55□□□□□ -1.04
VPS36-203ENST00000475375 CYP4F30PQ9H0H9 118 aa8.53□□□□□ -1.04
VPS36-203ENST00000475375 PLAC4Q8WY50 150 aa8.52□□□□□ -1.05
VPS36-203ENST00000475375 NDUFC1O43677 76 aa8.51□□□□□ -1.05
VPS36-203ENST00000475375 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
VPS36-203ENST00000475375 C9orf118A6NHY6 69 aa8.5□□□□□ -1.05
VPS36-203ENST00000475375 H0YAA0 97 aa8.49□□□□□ -1.05
VPS36-203ENST00000475375 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
VPS36-203ENST00000475375 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
VPS36-203ENST00000475375 K7EP34 96 aa8.43□□□□□ -1.06
VPS36-203ENST00000475375 KRTAP4-8A0A0G2JLE6 195 aa8.41□□□□□ -1.06
VPS36-203ENST00000475375 TAX1BP3O14907 124 aa8.41□□□□□ -1.06
VPS36-203ENST00000475375 KRTAP4-8Q9BYQ9 185 aa8.41□□□□□ -1.06
VPS36-203ENST00000475375 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
VPS36-203ENST00000475375 LCE3BQ5TA77 95 aa8.39□□□□□ -1.07
VPS36-203ENST00000475375 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
VPS36-203ENST00000475375 SPCS1Q9Y6A9 102 aa8.35□□□□□ -1.07
VPS36-203ENST00000475375 R4GN34 69 aa8.31□□□□□ -1.08
VPS36-203ENST00000475375 GPR98Q8WXG9 6306 aa8.3□□□□□ -1.08
VPS36-203ENST00000475375 ACYP1P07311 99 aa8.29□□□□□ -1.08
VPS36-203ENST00000475375 SMIM6P0DI80 62 aa8.28□□□□□ -1.08
VPS36-203ENST00000475375 M0QZ58 72 aa8.22□□□□□ -1.09
VPS36-203ENST00000475375 KRTAP10-7P60409 375 aaPredicted RBP8.2□□□□□ -1.1
VPS36-203ENST00000475375 PRO0461Q9UI25 63 aa8.19□□□□□ -1.1
VPS36-203ENST00000475375 P0C880 135 aa8.18□□□□□ -1.1
VPS36-203ENST00000475375 LINC01554Q52M75 96 aa8.18□□□□□ -1.1
VPS36-203ENST00000475375 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
VPS36-203ENST00000475375 H0Y9P7 68 aa8.17□□□□□ -1.1
VPS36-203ENST00000475375 ATOX1O00244 68 aa8.16□□□□□ -1.1
VPS36-203ENST00000475375 UQCRQO14949 82 aa8.13□□□□□ -1.11
VPS36-203ENST00000475375 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
VPS36-203ENST00000475375 DSTQ03001 7570 aaKnown RBP8.11□□□□□ -1.11
VPS36-203ENST00000475375 HIST1H4AP62805 103 aaKnown RBP8□□□□□ -1.13
VPS36-203ENST00000475375 LINC00208Q96KT6 92 aa7.99□□□□□ -1.13
VPS36-203ENST00000475375 ETDBQ3ZM63 59 aa7.97□□□□□ -1.13
VPS36-203ENST00000475375 COL5A1-AS1Q5SY13 56 aa7.97□□□□□ -1.13
VPS36-203ENST00000475375 KRTAP4-9Q9BYQ8 210 aa7.97□□□□□ -1.13
VPS36-203ENST00000475375 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.14
VPS36-203ENST00000475375 F8W1H4 67 aa7.9□□□□□ -1.14
VPS36-203ENST00000475375 GTF2H5Q6ZYL4 71 aa7.9□□□□□ -1.14
VPS36-203ENST00000475375 MT-ATP8P03928 68 aa7.89□□□□□ -1.15
VPS36-203ENST00000475375 ATP5EP2Q5VTU8 51 aa7.89□□□□□ -1.15
VPS36-203ENST00000475375 MP68P56378 58 aa7.86□□□□□ -1.15
VPS36-203ENST00000475375 DMAC1Q96GE9 116 aa7.78□□□□□ -1.16
VPS36-203ENST00000475375 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
VPS36-203ENST00000475375 OCR1Q9BZK8 76 aa7.72□□□□□ -1.17
VPS36-203ENST00000475375 FAM240AA0A1B0GVK7 77 aa7.71□□□□□ -1.18
VPS36-203ENST00000475375 LOC105371267A0A1B0GV96 52 aa7.7□□□□□ -1.18
VPS36-203ENST00000475375 LCE1DQ5T752 114 aa7.7□□□□□ -1.18
VPS36-203ENST00000475375 KRTAP19-3Q7Z4W3 81 aa7.69□□□□□ -1.18
VPS36-203ENST00000475375 KRTAP19-7Q3SYF9 63 aa7.66□□□□□ -1.18
VPS36-203ENST00000475375 MT1EP04732 61 aa7.64□□□□□ -1.19
VPS36-203ENST00000475375 HMCN1Q96RW7 5635 aa7.63□□□□□ -1.19
VPS36-203ENST00000475375 H3BPC8 53 aa7.62□□□□□ -1.19
VPS36-203ENST00000475375 TRAV7A0A075B6U4 112 aa7.61□□□□□ -1.19
VPS36-203ENST00000475375 LINC00643Q86TS7 51 aa7.61□□□□□ -1.19
VPS36-203ENST00000475375 CAMK2N1Q7Z7J9 78 aa7.59□□□□□ -1.19
VPS36-203ENST00000475375 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
VPS36-203ENST00000475375 MT4P47944 62 aa7.58□□□□□ -1.2
VPS36-203ENST00000475375 SPTSSBQ8NFR3 76 aa7.57□□□□□ -1.2
VPS36-203ENST00000475375 AHNAK2Q8IVF2 5795 aa7.57□□□□□ -1.2
VPS36-203ENST00000475375 LCE4AQ5TA78 99 aa7.53□□□□□ -1.2
VPS36-203ENST00000475375 ACYP2P14621 99 aa7.52□□□□□ -1.21
VPS36-203ENST00000475375 MT1GP13640 62 aa7.45□□□□□ -1.22
VPS36-203ENST00000475375 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
VPS36-203ENST00000475375 SCGB1A1P11684 91 aa7.43□□□□□ -1.22
VPS36-203ENST00000475375 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
VPS36-203ENST00000475375 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
VPS36-203ENST00000475375 KRTAP5-10Q6L8G5 202 aa7.39□□□□□ -1.23
VPS36-203ENST00000475375 KRTAP19-5Q3LI72 72 aa7.37□□□□□ -1.23
VPS36-203ENST00000475375 PCP4L1A6NKN8 68 aa7.36□□□□□ -1.23
VPS36-203ENST00000475375 A0A0D9SG42 100 aa7.35□□□□□ -1.23
VPS36-203ENST00000475375 MT1MQ8N339 61 aa7.32□□□□□ -1.24
VPS36-203ENST00000475375 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
VPS36-203ENST00000475375 KRTAP5-4Q6L8H1 288 aa7.24□□□□□ -1.25
VPS36-203ENST00000475375 MT1LQ93083 61 aa7.22□□□□□ -1.25
VPS36-203ENST00000475375 KRTAP4-3Q9BYR4 195 aa7.2□□□□□ -1.26
VPS36-203ENST00000475375 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
VPS36-203ENST00000475375 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
VPS36-203ENST00000475375 KRTAP5-3Q6L8H2 238 aa7.11□□□□□ -1.27
VPS36-203ENST00000475375 J3QR89 54 aa7.02□□□□□ -1.29
VPS36-203ENST00000475375 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
VPS36-203ENST00000475375 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
VPS36-203ENST00000475375 SNURFQ9Y675 71 aa7.01□□□□□ -1.29
VPS36-203ENST00000475375 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
VPS36-203ENST00000475375 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
VPS36-203ENST00000475375 SEC61GP60059 68 aa6.98□□□□□ -1.29
VPS36-203ENST00000475375 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
VPS36-203ENST00000475375 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
VPS36-203ENST00000475375 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
VPS36-203ENST00000475375 SPANXA2-OT1Q8N9U9 137 aa6.94□□□□□ -1.3
VPS36-203ENST00000475375 KRTAP20-2Q3LI61 65 aa6.92□□□□□ -1.3
VPS36-203ENST00000475375 A0A1B0GU33 70 aa6.87□□□□□ -1.31
VPS36-203ENST00000475375 A0A1B0GV90 55 aa6.86□□□□□ -1.31
VPS36-203ENST00000475375 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
VPS36-203ENST00000475375 COA5Q86WW8 74 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms