RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 Q5VSD8 79 aa6.72□□□□□ -1.33
RNF220-211ENST00000474956 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
RNF220-211ENST00000474956 LPAP08519 4548 aa6.65□□□□□ -1.35
RNF220-211ENST00000474956 A8MUU9 505 aa6.64□□□□□ -1.35
RNF220-211ENST00000474956 H0YAA0 97 aa6.64□□□□□ -1.35
RNF220-211ENST00000474956 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
RNF220-211ENST00000474956 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
RNF220-211ENST00000474956 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
RNF220-211ENST00000474956 A0A1B0GU33 70 aa6.61□□□□□ -1.35
RNF220-211ENST00000474956 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
RNF220-211ENST00000474956 LRP2P98164 4655 aa6.57□□□□□ -1.36
RNF220-211ENST00000474956 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
RNF220-211ENST00000474956 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
RNF220-211ENST00000474956 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
RNF220-211ENST00000474956 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
RNF220-211ENST00000474956 COX6B2Q6YFQ2 88 aa6.49□□□□□ -1.37
RNF220-211ENST00000474956 XP32Q5T750 250 aa6.48□□□□□ -1.37
RNF220-211ENST00000474956 K7ERS5 55 aa6.47□□□□□ -1.37
RNF220-211ENST00000474956 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
RNF220-211ENST00000474956 HERC2O95714 4834 aa6.35□□□□□ -1.39
RNF220-211ENST00000474956 ROMO1P60602 79 aa6.35□□□□□ -1.39
RNF220-211ENST00000474956 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
RNF220-211ENST00000474956 CRIPTQ9P021 101 aa6.32□□□□□ -1.4
RNF220-211ENST00000474956 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
RNF220-211ENST00000474956 MUC2Q02817 5179 aa6.27□□□□□ -1.41
RNF220-211ENST00000474956 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
RNF220-211ENST00000474956 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
RNF220-211ENST00000474956 S4R3F8 94 aa6.24□□□□□ -1.41
RNF220-211ENST00000474956 A0A0D9SG42 100 aa6.24□□□□□ -1.41
RNF220-211ENST00000474956 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
RNF220-211ENST00000474956 HERC1Q15751 4861 aa6.19□□□□□ -1.42
RNF220-211ENST00000474956 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
RNF220-211ENST00000474956 P0C880 135 aa6.16□□□□□ -1.42
RNF220-211ENST00000474956 PCLOQ9Y6V0 5065 aa6.16□□□□□ -1.42
RNF220-211ENST00000474956 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.43
RNF220-211ENST00000474956 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
RNF220-211ENST00000474956 J3QL48 77 aa6.1□□□□□ -1.43
RNF220-211ENST00000474956 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
RNF220-211ENST00000474956 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
RNF220-211ENST00000474956 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
RNF220-211ENST00000474956 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
RNF220-211ENST00000474956 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
RNF220-211ENST00000474956 M0QZ58 72 aa6.01□□□□□ -1.45
RNF220-211ENST00000474956 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
RNF220-211ENST00000474956 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.46
RNF220-211ENST00000474956 FAT4Q6V0I7 4981 aa5.95□□□□□ -1.46
RNF220-211ENST00000474956 SEC61BP60468 96 aaKnown RBP5.94□□□□□ -1.46
RNF220-211ENST00000474956 LORP23490 312 aaPredicted RBP5.91□□□□□ -1.46
RNF220-211ENST00000474956 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
RNF220-211ENST00000474956 KRTAP19-2Q3LHN2 52 aa5.91□□□□□ -1.46
RNF220-211ENST00000474956 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
RNF220-211ENST00000474956 UBR4Q5T4S7 5183 aa5.85□□□□□ -1.47
RNF220-211ENST00000474956 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
RNF220-211ENST00000474956 R4GN34 69 aa5.81□□□□□ -1.48
RNF220-211ENST00000474956 LCE2CQ5TA81 110 aa5.64□□□□□ -1.51
RNF220-211ENST00000474956 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
RNF220-211ENST00000474956 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
RNF220-211ENST00000474956 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
RNF220-211ENST00000474956 MT1HP80294 61 aa5.48□□□□□ -1.53
RNF220-211ENST00000474956 M0R2T5 61 aa5.48□□□□□ -1.53
RNF220-211ENST00000474956 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
RNF220-211ENST00000474956 MT1FP04733 61 aa5.38□□□□□ -1.55
RNF220-211ENST00000474956 TNP1P09430 55 aa5.36□□□□□ -1.55
RNF220-211ENST00000474956 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
RNF220-211ENST00000474956 MT2AP02795 61 aa5.35□□□□□ -1.55
RNF220-211ENST00000474956 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
RNF220-211ENST00000474956 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
RNF220-211ENST00000474956 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
RNF220-211ENST00000474956 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
RNF220-211ENST00000474956 USH2AO75445 5202 aa5.23□□□□□ -1.57
RNF220-211ENST00000474956 MT1BP07438 61 aa5.13□□□□□ -1.59
RNF220-211ENST00000474956 LCE2DQ5TA82 110 aaPredicted RBP5.12□□□□□ -1.59
RNF220-211ENST00000474956 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
RNF220-211ENST00000474956 KRTAP19-8Q3LI54 63 aa5.08□□□□□ -1.6
RNF220-211ENST00000474956 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
RNF220-211ENST00000474956 MT1XP80297 61 aa5.05□□□□□ -1.6
RNF220-211ENST00000474956 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
RNF220-211ENST00000474956 KMT2DO14686 5537 aa5.03□□□□□ -1.6
RNF220-211ENST00000474956 LCE2BO14633 110 aa4.99□□□□□ -1.61
RNF220-211ENST00000474956 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
RNF220-211ENST00000474956 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
RNF220-211ENST00000474956 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
RNF220-211ENST00000474956 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
RNF220-211ENST00000474956 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
RNF220-211ENST00000474956 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
RNF220-211ENST00000474956 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
RNF220-211ENST00000474956 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
RNF220-211ENST00000474956 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
RNF220-211ENST00000474956 INE1O15225 51 aa4.76□□□□□ -1.65
RNF220-211ENST00000474956 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
RNF220-211ENST00000474956 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
RNF220-211ENST00000474956 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
RNF220-211ENST00000474956 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
RNF220-211ENST00000474956 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
RNF220-211ENST00000474956 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
RNF220-211ENST00000474956 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
RNF220-211ENST00000474956 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
RNF220-211ENST00000474956 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.7
RNF220-211ENST00000474956 MT1EP04732 61 aa4.36□□□□□ -1.71
RNF220-211ENST00000474956 MT1LQ93083 61 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms