RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
ITGB1-210ENST00000474568 LINC00208Q96KT6 92 aa7.31□□□□□ -1.24
ITGB1-210ENST00000474568 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
ITGB1-210ENST00000474568 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
ITGB1-210ENST00000474568 KRTAP9-7A8MTY7 169 aa7.26□□□□□ -1.25
ITGB1-210ENST00000474568 MP68P56378 58 aa7.26□□□□□ -1.25
ITGB1-210ENST00000474568 MACF1Q9UPN3 7388 aaKnown RBP7.24□□□□□ -1.25
ITGB1-210ENST00000474568 SCGB1A1P11684 91 aa7.21□□□□□ -1.26
ITGB1-210ENST00000474568 NDUFC1O43677 76 aa7.2□□□□□ -1.26
ITGB1-210ENST00000474568 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
ITGB1-210ENST00000474568 A8MUN3 132 aa7.17□□□□□ -1.26
ITGB1-210ENST00000474568 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
ITGB1-210ENST00000474568 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
ITGB1-210ENST00000474568 MT1BP07438 61 aa7.15□□□□□ -1.26
ITGB1-210ENST00000474568 Q5VV11 94 aa7.15□□□□□ -1.26
ITGB1-210ENST00000474568 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
ITGB1-210ENST00000474568 H3BPC8 53 aa7.12□□□□□ -1.27
ITGB1-210ENST00000474568 MT-ATP8P03928 68 aa7.12□□□□□ -1.27
ITGB1-210ENST00000474568 KRTAP19-8Q3LI54 63 aa7.12□□□□□ -1.27
ITGB1-210ENST00000474568 K7ERU9 68 aa7.08□□□□□ -1.28
ITGB1-210ENST00000474568 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
ITGB1-210ENST00000474568 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
ITGB1-210ENST00000474568 A6NN06 94 aa7.05□□□□□ -1.28
ITGB1-210ENST00000474568 H0YAA0 97 aa7.05□□□□□ -1.28
ITGB1-210ENST00000474568 DMAC1Q96GE9 116 aa7.03□□□□□ -1.28
ITGB1-210ENST00000474568 TRAV7A0A075B6U4 112 aa6.98□□□□□ -1.29
ITGB1-210ENST00000474568 KRTAP4-12Q9BQ66 201 aa6.96□□□□□ -1.3
ITGB1-210ENST00000474568 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
ITGB1-210ENST00000474568 SMIM20Q8N5G0 67 aa6.95□□□□□ -1.3
ITGB1-210ENST00000474568 P0C880 135 aa6.93□□□□□ -1.3
ITGB1-210ENST00000474568 KRTAP6-3Q3LI67 103 aa6.9□□□□□ -1.3
ITGB1-210ENST00000474568 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
ITGB1-210ENST00000474568 ACYP2P14621 99 aa6.87□□□□□ -1.31
ITGB1-210ENST00000474568 R4GN34 69 aa6.87□□□□□ -1.31
ITGB1-210ENST00000474568 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
ITGB1-210ENST00000474568 M0QZ58 72 aa6.84□□□□□ -1.31
ITGB1-210ENST00000474568 LCE3BQ5TA77 95 aa6.81□□□□□ -1.32
ITGB1-210ENST00000474568 CHKB-CPT1BH3BT56 60 aa6.8□□□□□ -1.32
ITGB1-210ENST00000474568 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
ITGB1-210ENST00000474568 LINC01554Q52M75 96 aa6.78□□□□□ -1.32
ITGB1-210ENST00000474568 SERP2Q8N6R1 65 aa6.77□□□□□ -1.33
ITGB1-210ENST00000474568 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
ITGB1-210ENST00000474568 NEBP20929 6669 aa6.76□□□□□ -1.33
ITGB1-210ENST00000474568 H3BS24 57 aa6.75□□□□□ -1.33
ITGB1-210ENST00000474568 MT1XP80297 61 aa6.73□□□□□ -1.33
ITGB1-210ENST00000474568 MUC12Q9UKN1 5478 aa6.72□□□□□ -1.33
ITGB1-210ENST00000474568 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
ITGB1-210ENST00000474568 SPANXA2-OT1Q8N9U9 137 aa6.7□□□□□ -1.34
ITGB1-210ENST00000474568 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
ITGB1-210ENST00000474568 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
ITGB1-210ENST00000474568 KMT2DO14686 5537 aa6.64□□□□□ -1.35
ITGB1-210ENST00000474568 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
ITGB1-210ENST00000474568 COX7CP15954 63 aa6.58□□□□□ -1.36
ITGB1-210ENST00000474568 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
ITGB1-210ENST00000474568 COA5Q86WW8 74 aa6.58□□□□□ -1.36
ITGB1-210ENST00000474568 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
ITGB1-210ENST00000474568 MDN1Q9NU22 5596 aa6.55□□□□□ -1.36
ITGB1-210ENST00000474568 CYSTM1Q9H1C7 97 aa6.52□□□□□ -1.37
ITGB1-210ENST00000474568 KRTAP13-4Q3LI77 160 aa6.51□□□□□ -1.37
ITGB1-210ENST00000474568 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
ITGB1-210ENST00000474568 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
ITGB1-210ENST00000474568 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
ITGB1-210ENST00000474568 H7BZZ5 65 aa6.47□□□□□ -1.37
ITGB1-210ENST00000474568 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
ITGB1-210ENST00000474568 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
ITGB1-210ENST00000474568 SEC61GP60059 68 aa6.41□□□□□ -1.38
ITGB1-210ENST00000474568 ANAPC13Q9BS18 74 aa6.41□□□□□ -1.38
ITGB1-210ENST00000474568 SERP1Q9Y6X1 66 aa6.41□□□□□ -1.38
ITGB1-210ENST00000474568 SPRR2EP22531 72 aa6.38□□□□□ -1.39
ITGB1-210ENST00000474568 SPRR2BP35325 72 aa6.38□□□□□ -1.39
ITGB1-210ENST00000474568 SPRR2AP35326 72 aa6.38□□□□□ -1.39
ITGB1-210ENST00000474568 KRTAP20-1Q3LI63 56 aa6.38□□□□□ -1.39
ITGB1-210ENST00000474568 A0A0D9SG42 100 aa6.36□□□□□ -1.39
ITGB1-210ENST00000474568 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
ITGB1-210ENST00000474568 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
ITGB1-210ENST00000474568 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.39
ITGB1-210ENST00000474568 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
ITGB1-210ENST00000474568 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
ITGB1-210ENST00000474568 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
ITGB1-210ENST00000474568 A0A1B0GU33 70 aa6.3□□□□□ -1.4
ITGB1-210ENST00000474568 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
ITGB1-210ENST00000474568 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
ITGB1-210ENST00000474568 A0A1B0GU69 56 aa6.23□□□□□ -1.41
ITGB1-210ENST00000474568 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
ITGB1-210ENST00000474568 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
ITGB1-210ENST00000474568 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
ITGB1-210ENST00000474568 SPRR2DP22532 72 aa6.16□□□□□ -1.42
ITGB1-210ENST00000474568 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
ITGB1-210ENST00000474568 A8MU10 97 aa6.13□□□□□ -1.43
ITGB1-210ENST00000474568 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-210ENST00000474568 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
ITGB1-210ENST00000474568 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
ITGB1-210ENST00000474568 PRR15LQ9BU68 103 aa6.04□□□□□ -1.44
ITGB1-210ENST00000474568 KRTAP4-2Q9BYR5 136 aa6.02□□□□□ -1.45
ITGB1-210ENST00000474568 TMEM258P61165 79 aa6.01□□□□□ -1.45
ITGB1-210ENST00000474568 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
ITGB1-210ENST00000474568 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
ITGB1-210ENST00000474568 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
ITGB1-210ENST00000474568 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
ITGB1-210ENST00000474568 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms