RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 MYCBP2O75592 4640 aa11.48□□□□□ -0.57
RNF220-209ENST00000474064 DMBT1Q9UGM3 2413 aaPredicted RBP11.45□□□□□ -0.58
RNF220-209ENST00000474064 A8MUU9 505 aa11.44□□□□□ -0.58
RNF220-209ENST00000474064 H0YAA0 97 aa11.43□□□□□ -0.58
RNF220-209ENST00000474064 KRTAP25-1Q3LHN0 102 aa11.41□□□□□ -0.58
RNF220-209ENST00000474064 C20orf166-AS1Q96NR2 134 aa11.4□□□□□ -0.58
RNF220-209ENST00000474064 ROMO1P60602 79 aa11.35□□□□□ -0.59
RNF220-209ENST00000474064 MT1HL1P0DM35 61 aa11.28□□□□□ -0.6
RNF220-209ENST00000474064 A0A1B0GU33 70 aa11.26□□□□□ -0.61
RNF220-209ENST00000474064 CRIPTQ9P021 101 aa11.22□□□□□ -0.61
RNF220-209ENST00000474064 KRTAP4-5Q9BYR2 181 aa11.19□□□□□ -0.62
RNF220-209ENST00000474064 H1FX-AS1Q4G0G2 97 aa11.16□□□□□ -0.62
RNF220-209ENST00000474064 XP32Q5T750 250 aa11.11□□□□□ -0.63
RNF220-209ENST00000474064 KRTAP3-1Q9BYR8 98 aa11.08□□□□□ -0.64
RNF220-209ENST00000474064 RPL37P61927 97 aaKnown RBP11.07□□□□□ -0.64
RNF220-209ENST00000474064 P0C880 135 aa11.05□□□□□ -0.64
RNF220-209ENST00000474064 ABCA13Q86UQ4 5058 aa11.04□□□□□ -0.64
RNF220-209ENST00000474064 K7ERS5 55 aa11.03□□□□□ -0.64
RNF220-209ENST00000474064 COX6B2Q6YFQ2 88 aa10.97□□□□□ -0.65
RNF220-209ENST00000474064 LPAP08519 4548 aa10.93□□□□□ -0.66
RNF220-209ENST00000474064 LRP2P98164 4655 aa10.93□□□□□ -0.66
RNF220-209ENST00000474064 HERC2O95714 4834 aa10.9□□□□□ -0.67
RNF220-209ENST00000474064 TPRXLQ17RH7 258 aa10.85□□□□□ -0.67
RNF220-209ENST00000474064 BIRC6Q9NR09 4857 aa10.83□□□□□ -0.68
RNF220-209ENST00000474064 J3QL48 77 aa10.81□□□□□ -0.68
RNF220-209ENST00000474064 SPINT4Q6UDR6 99 aa10.8□□□□□ -0.68
RNF220-209ENST00000474064 A0A0D9SG42 100 aa10.73□□□□□ -0.69
RNF220-209ENST00000474064 KRTAP13-4Q3LI77 160 aa10.69□□□□□ -0.7
RNF220-209ENST00000474064 C10orf95Q9H7T3 257 aa10.68□□□□□ -0.7
RNF220-209ENST00000474064 KRTAP10-6P60371 365 aaPredicted RBP10.67□□□□□ -0.7
RNF220-209ENST00000474064 NDUFAF8A1L188 74 aa10.6□□□□□ -0.71
RNF220-209ENST00000474064 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
RNF220-209ENST00000474064 S4R3F8 94 aa10.58□□□□□ -0.72
RNF220-209ENST00000474064 KRTAP15-1Q3LI76 137 aa10.55□□□□□ -0.72
RNF220-209ENST00000474064 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
RNF220-209ENST00000474064 PCLOQ9Y6V0 5065 aa10.49□□□□□ -0.73
RNF220-209ENST00000474064 SEC61BP60468 96 aaKnown RBP10.48□□□□□ -0.73
RNF220-209ENST00000474064 HERC1Q15751 4861 aa10.43□□□□□ -0.74
RNF220-209ENST00000474064 MUC17Q685J3 4493 aa10.4□□□□□ -0.74
RNF220-209ENST00000474064 KRTAP12-2P59991 146 aa10.4□□□□□ -0.75
RNF220-209ENST00000474064 KRTAP4-1Q9BYQ7 146 aa10.39□□□□□ -0.75
RNF220-209ENST00000474064 MUC2Q02817 5179 aa10.28□□□□□ -0.76
RNF220-209ENST00000474064 KRTAP12-1P59990 96 aa10.24□□□□□ -0.77
RNF220-209ENST00000474064 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
RNF220-209ENST00000474064 KRTAP19-2Q3LHN2 52 aa10.06□□□□□ -0.8
RNF220-209ENST00000474064 M0QZ58 72 aa9.96□□□□□ -0.81
RNF220-209ENST00000474064 FLGP20930 4061 aaPredicted RBP9.88□□□□□ -0.83
RNF220-209ENST00000474064 UBR4Q5T4S7 5183 aa9.85□□□□□ -0.83
RNF220-209ENST00000474064 A0A0A0MQY5 61 aa9.84□□□□□ -0.83
RNF220-209ENST00000474064 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
RNF220-209ENST00000474064 FAT4Q6V0I7 4981 aa9.83□□□□□ -0.84
RNF220-209ENST00000474064 PLAC4Q8WY50 150 aa9.82□□□□□ -0.84
RNF220-209ENST00000474064 R4GN34 69 aa9.81□□□□□ -0.84
RNF220-209ENST00000474064 RNF213Q63HN8 5207 aa9.81□□□□□ -0.84
RNF220-209ENST00000474064 LUZP6Q538Z0 58 aa9.74□□□□□ -0.85
RNF220-209ENST00000474064 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
RNF220-209ENST00000474064 M0R2T5 61 aa9.54□□□□□ -0.88
RNF220-209ENST00000474064 MT1HP80294 61 aa9.48□□□□□ -0.89
RNF220-209ENST00000474064 PP632Q6XCG6 107 aa9.36□□□□□ -0.91
RNF220-209ENST00000474064 CAMK2N1Q7Z7J9 78 aa9.27□□□□□ -0.92
RNF220-209ENST00000474064 KRTAP10-10P60014 251 aa9.21□□□□□ -0.93
RNF220-209ENST00000474064 MT2AP02795 61 aa9.21□□□□□ -0.94
RNF220-209ENST00000474064 MT1FP04733 61 aa9.2□□□□□ -0.94
RNF220-209ENST00000474064 KRTAP9-8Q9BYQ0 159 aa9.18□□□□□ -0.94
RNF220-209ENST00000474064 KRTAP19-1Q8IUB9 90 aa9.17□□□□□ -0.94
RNF220-209ENST00000474064 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.95
RNF220-209ENST00000474064 SPRR5A0A1B0GTR4 108 aa8.97□□□□□ -0.97
RNF220-209ENST00000474064 TNP1P09430 55 aa8.95□□□□□ -0.98
RNF220-209ENST00000474064 KRTAP23-1A1A580 65 aa8.83□□□□□ -1
RNF220-209ENST00000474064 KRTAP9-3Q9BYQ3 159 aa8.82□□□□□ -1
RNF220-209ENST00000474064 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
RNF220-209ENST00000474064 MT1BP07438 61 aa8.76□□□□□ -1.01
RNF220-209ENST00000474064 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
RNF220-209ENST00000474064 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
RNF220-209ENST00000474064 MT1XP80297 61 aa8.59□□□□□ -1.03
RNF220-209ENST00000474064 PRO2289Q9P1D8 64 aa8.58□□□□□ -1.04
RNF220-209ENST00000474064 LCE2BO14633 110 aa8.57□□□□□ -1.04
RNF220-209ENST00000474064 USH2AO75445 5202 aa8.54□□□□□ -1.04
RNF220-209ENST00000474064 LCE3AQ5TA76 89 aa8.45□□□□□ -1.06
RNF220-209ENST00000474064 INE1O15225 51 aa8.36□□□□□ -1.07
RNF220-209ENST00000474064 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
RNF220-209ENST00000474064 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
RNF220-209ENST00000474064 KRTAP8-1Q8IUC2 63 aa8.16□□□□□ -1.1
RNF220-209ENST00000474064 KMT2DO14686 5537 aa8.13□□□□□ -1.11
RNF220-209ENST00000474064 FSIP2Q5CZC0 6907 aa8.11□□□□□ -1.11
RNF220-209ENST00000474064 SSPOA2VEC9 5147 aa8.05□□□□□ -1.12
RNF220-209ENST00000474064 KRTAP12-3P60328 96 aa8.04□□□□□ -1.12
RNF220-209ENST00000474064 KRTAP4-8A0A0G2JLE6 195 aa7.97□□□□□ -1.13
RNF220-209ENST00000474064 KRTAP4-8Q9BYQ9 185 aa7.97□□□□□ -1.13
RNF220-209ENST00000474064 KRTAP19-5Q3LI72 72 aa7.9□□□□□ -1.14
RNF220-209ENST00000474064 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
RNF220-209ENST00000474064 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
RNF220-209ENST00000474064 KRTAP19-7Q3SYF9 63 aa7.65□□□□□ -1.18
RNF220-209ENST00000474064 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
RNF220-209ENST00000474064 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
RNF220-209ENST00000474064 MT1EP04732 61 aa7.47□□□□□ -1.21
RNF220-209ENST00000474064 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
RNF220-209ENST00000474064 KRTAP9-6A8MVA2 160 aa7.4□□□□□ -1.23
RNF220-209ENST00000474064 MT1LQ93083 61 aa7.39□□□□□ -1.23
RNF220-209ENST00000474064 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms