RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 KRTAP10-4P60372 401 aaPredicted RBP7.43□□□□□ -1.22
ABCF3-210ENST00000473311 A0A1B0GVY2 172 aa7.39□□□□□ -1.23
ABCF3-210ENST00000473311 COX6B2Q6YFQ2 88 aa7.37□□□□□ -1.23
ABCF3-210ENST00000473311 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
ABCF3-210ENST00000473311 TPRXLQ17RH7 258 aa7.33□□□□□ -1.24
ABCF3-210ENST00000473311 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
ABCF3-210ENST00000473311 LUZP6Q538Z0 58 aa7.26□□□□□ -1.25
ABCF3-210ENST00000473311 LRP1Q07954 4544 aaKnown RBP7.24□□□□□ -1.25
ABCF3-210ENST00000473311 DMBT1Q9UGM3 2413 aaPredicted RBP7.23□□□□□ -1.25
ABCF3-210ENST00000473311 RYR2Q92736 4967 aa7.18□□□□□ -1.26
ABCF3-210ENST00000473311 HSPG2P98160 4391 aa7.18□□□□□ -1.26
ABCF3-210ENST00000473311 TNXBP22105 4242 aa7.18□□□□□ -1.26
ABCF3-210ENST00000473311 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
ABCF3-210ENST00000473311 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
ABCF3-210ENST00000473311 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
ABCF3-210ENST00000473311 KRTAP10-6P60371 365 aaPredicted RBP7.14□□□□□ -1.27
ABCF3-210ENST00000473311 KMT2CQ8NEZ4 4911 aaKnown RBP7.14□□□□□ -1.27
ABCF3-210ENST00000473311 XP32Q5T750 250 aa7.13□□□□□ -1.27
ABCF3-210ENST00000473311 Q5VSD8 79 aa7.13□□□□□ -1.27
ABCF3-210ENST00000473311 MYCBP2O75592 4640 aa7.12□□□□□ -1.27
ABCF3-210ENST00000473311 S4R3F8 94 aa7.11□□□□□ -1.27
ABCF3-210ENST00000473311 A0A0D9SG42 100 aa7.1□□□□□ -1.27
ABCF3-210ENST00000473311 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
ABCF3-210ENST00000473311 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
ABCF3-210ENST00000473311 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
ABCF3-210ENST00000473311 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
ABCF3-210ENST00000473311 RYR1P21817 5038 aa6.93□□□□□ -1.3
ABCF3-210ENST00000473311 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
ABCF3-210ENST00000473311 LPAP08519 4548 aa6.9□□□□□ -1.3
ABCF3-210ENST00000473311 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
ABCF3-210ENST00000473311 LRP2P98164 4655 aa6.86□□□□□ -1.31
ABCF3-210ENST00000473311 KIAA1109Q2LD37 5005 aa6.86□□□□□ -1.31
ABCF3-210ENST00000473311 RYR3Q15413 4870 aa6.86□□□□□ -1.31
ABCF3-210ENST00000473311 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
ABCF3-210ENST00000473311 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
ABCF3-210ENST00000473311 M0QZ58 72 aa6.77□□□□□ -1.33
ABCF3-210ENST00000473311 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
ABCF3-210ENST00000473311 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
ABCF3-210ENST00000473311 R4GN34 69 aa6.63□□□□□ -1.35
ABCF3-210ENST00000473311 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
ABCF3-210ENST00000473311 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
ABCF3-210ENST00000473311 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
ABCF3-210ENST00000473311 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
ABCF3-210ENST00000473311 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
ABCF3-210ENST00000473311 KRTAP4-1Q9BYQ7 146 aa6.48□□□□□ -1.37
ABCF3-210ENST00000473311 J3QL48 77 aa6.42□□□□□ -1.38
ABCF3-210ENST00000473311 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
ABCF3-210ENST00000473311 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
ABCF3-210ENST00000473311 HERC2O95714 4834 aa6.28□□□□□ -1.4
ABCF3-210ENST00000473311 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
ABCF3-210ENST00000473311 MUC2Q02817 5179 aa6.25□□□□□ -1.41
ABCF3-210ENST00000473311 INE1O15225 51 aa6.21□□□□□ -1.41
ABCF3-210ENST00000473311 BIRC6Q9NR09 4857 aa6.2□□□□□ -1.42
ABCF3-210ENST00000473311 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
ABCF3-210ENST00000473311 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
ABCF3-210ENST00000473311 TNP1P09430 55 aa6.07□□□□□ -1.44
ABCF3-210ENST00000473311 PCLOQ9Y6V0 5065 aa6.05□□□□□ -1.44
ABCF3-210ENST00000473311 HERC1Q15751 4861 aa6.02□□□□□ -1.45
ABCF3-210ENST00000473311 FAT4Q6V0I7 4981 aa5.95□□□□□ -1.46
ABCF3-210ENST00000473311 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
ABCF3-210ENST00000473311 HMCN2Q8NDA2 5059 aa5.93□□□□□ -1.46
ABCF3-210ENST00000473311 M0R2T5 61 aa5.89□□□□□ -1.47
ABCF3-210ENST00000473311 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
ABCF3-210ENST00000473311 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
ABCF3-210ENST00000473311 MT1HP80294 61 aa5.78□□□□□ -1.48
ABCF3-210ENST00000473311 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
ABCF3-210ENST00000473311 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
ABCF3-210ENST00000473311 MT1FP04733 61 aa5.73□□□□□ -1.49
ABCF3-210ENST00000473311 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
ABCF3-210ENST00000473311 MT2AP02795 61 aa5.72□□□□□ -1.49
ABCF3-210ENST00000473311 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
ABCF3-210ENST00000473311 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
ABCF3-210ENST00000473311 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
ABCF3-210ENST00000473311 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
ABCF3-210ENST00000473311 MT1BP07438 61 aa5.55□□□□□ -1.52
ABCF3-210ENST00000473311 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
ABCF3-210ENST00000473311 MT1XP80297 61 aa5.53□□□□□ -1.52
ABCF3-210ENST00000473311 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
ABCF3-210ENST00000473311 KRTAP12-3P60328 96 aa5.45□□□□□ -1.54
ABCF3-210ENST00000473311 KRTAP10-7P60409 375 aaPredicted RBP5.41□□□□□ -1.54
ABCF3-210ENST00000473311 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
ABCF3-210ENST00000473311 LCE2BO14633 110 aa5.19□□□□□ -1.58
ABCF3-210ENST00000473311 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
ABCF3-210ENST00000473311 USH2AO75445 5202 aa5.15□□□□□ -1.59
ABCF3-210ENST00000473311 KMT2DO14686 5537 aa5.12□□□□□ -1.59
ABCF3-210ENST00000473311 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
ABCF3-210ENST00000473311 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
ABCF3-210ENST00000473311 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
ABCF3-210ENST00000473311 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
ABCF3-210ENST00000473311 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
ABCF3-210ENST00000473311 LCE2AQ5TA79 106 aaPredicted RBP5□□□□□ -1.61
ABCF3-210ENST00000473311 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
ABCF3-210ENST00000473311 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
ABCF3-210ENST00000473311 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
ABCF3-210ENST00000473311 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
ABCF3-210ENST00000473311 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
ABCF3-210ENST00000473311 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
ABCF3-210ENST00000473311 MT1LQ93083 61 aa4.8□□□□□ -1.64
ABCF3-210ENST00000473311 FSIP2Q5CZC0 6907 aa4.79□□□□□ -1.64
ABCF3-210ENST00000473311 MT1EP04732 61 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms