RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 MT1HP80294 61 aa10.91□□□□□ -0.66
PAXBP1-208ENST00000472588 FLGP20930 4061 aaPredicted RBP10.91□□□□□ -0.66
PAXBP1-208ENST00000472588 CHKB-CPT1BH3BT56 60 aa10.9□□□□□ -0.66
PAXBP1-208ENST00000472588 LCA10Q71F78 164 aa10.9□□□□□ -0.66
PAXBP1-208ENST00000472588 M0R2T5 61 aa10.86□□□□□ -0.67
PAXBP1-208ENST00000472588 COA5Q86WW8 74 aa10.85□□□□□ -0.67
PAXBP1-208ENST00000472588 CSAG1Q6PB30 78 aa10.83□□□□□ -0.68
PAXBP1-208ENST00000472588 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
PAXBP1-208ENST00000472588 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
PAXBP1-208ENST00000472588 KRTAP3-3Q9BYR6 98 aa10.79□□□□□ -0.68
PAXBP1-208ENST00000472588 SERP1Q9Y6X1 66 aa10.72□□□□□ -0.69
PAXBP1-208ENST00000472588 KRTAP10-6P60371 365 aaPredicted RBP10.64□□□□□ -0.71
PAXBP1-208ENST00000472588 KRTAP9-2Q9BYQ4 174 aa10.63□□□□□ -0.71
PAXBP1-208ENST00000472588 LORP23490 312 aaPredicted RBP10.61□□□□□ -0.71
PAXBP1-208ENST00000472588 H0YAA0 97 aa10.55□□□□□ -0.72
PAXBP1-208ENST00000472588 RPS28P62857 69 aaKnown RBP10.55□□□□□ -0.72
PAXBP1-208ENST00000472588 KRTAP9-8Q9BYQ0 159 aa10.44□□□□□ -0.74
PAXBP1-208ENST00000472588 SEC61GP60059 68 aa10.43□□□□□ -0.74
PAXBP1-208ENST00000472588 ADM2Q7Z4H4 148 aa10.43□□□□□ -0.74
PAXBP1-208ENST00000472588 SMIM26A0A096LP01 95 aa10.4□□□□□ -0.75
PAXBP1-208ENST00000472588 MT2AP02795 61 aa10.38□□□□□ -0.75
PAXBP1-208ENST00000472588 V9GYY9 64 aa10.34□□□□□ -0.75
PAXBP1-208ENST00000472588 KRTAP10-10P60014 251 aa10.33□□□□□ -0.76
PAXBP1-208ENST00000472588 LINC01558Q9Y6Z2 57 aa10.33□□□□□ -0.76
PAXBP1-208ENST00000472588 A0A1B0GU69 56 aa10.33□□□□□ -0.76
PAXBP1-208ENST00000472588 PRR15LQ9BU68 103 aa10.31□□□□□ -0.76
PAXBP1-208ENST00000472588 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
PAXBP1-208ENST00000472588 MT1FP04733 61 aa10.3□□□□□ -0.76
PAXBP1-208ENST00000472588 P0C880 135 aa10.27□□□□□ -0.77
PAXBP1-208ENST00000472588 Q1T7F1 81 aa10.27□□□□□ -0.77
PAXBP1-208ENST00000472588 CRIPTQ9P021 101 aa10.26□□□□□ -0.77
PAXBP1-208ENST00000472588 KRTAP9-6A0A140TA67 174 aa10.24□□□□□ -0.77
PAXBP1-208ENST00000472588 R4GN34 69 aa10.15□□□□□ -0.79
PAXBP1-208ENST00000472588 A0A1B0GU33 70 aa10.12□□□□□ -0.79
PAXBP1-208ENST00000472588 M0QZ58 72 aa10.1□□□□□ -0.79
PAXBP1-208ENST00000472588 KRTAP9-3Q9BYQ3 159 aa10.08□□□□□ -0.8
PAXBP1-208ENST00000472588 FSIP2Q5CZC0 6907 aa10.08□□□□□ -0.8
PAXBP1-208ENST00000472588 PSPHP1O15172 72 aa10.06□□□□□ -0.8
PAXBP1-208ENST00000472588 CRCT1Q9UGL9 99 aa10.06□□□□□ -0.8
PAXBP1-208ENST00000472588 SPRR2GQ9BYE4 73 aa10.05□□□□□ -0.8
PAXBP1-208ENST00000472588 KRTAP19-1Q8IUB9 90 aa9.99□□□□□ -0.81
PAXBP1-208ENST00000472588 UQCR11O14957 56 aa9.97□□□□□ -0.81
PAXBP1-208ENST00000472588 Q5VV11 94 aa9.97□□□□□ -0.81
PAXBP1-208ENST00000472588 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
PAXBP1-208ENST00000472588 LCE2BO14633 110 aa9.9□□□□□ -0.82
PAXBP1-208ENST00000472588 SPATA8Q6RVD6 105 aa9.9□□□□□ -0.83
PAXBP1-208ENST00000472588 LINC01554Q52M75 96 aa9.88□□□□□ -0.83
PAXBP1-208ENST00000472588 USH2AO75445 5202 aa9.88□□□□□ -0.83
PAXBP1-208ENST00000472588 KRTAP19-8Q3LI54 63 aa9.82□□□□□ -0.84
PAXBP1-208ENST00000472588 A6NED7 52 aa9.81□□□□□ -0.84
PAXBP1-208ENST00000472588 MIR22HGQ0VDD5 57 aa9.79□□□□□ -0.84
PAXBP1-208ENST00000472588 A6NN06 94 aa9.76□□□□□ -0.85
PAXBP1-208ENST00000472588 A0A0D9SG42 100 aa9.75□□□□□ -0.85
PAXBP1-208ENST00000472588 SSPOA2VEC9 5147 aa9.72□□□□□ -0.85
PAXBP1-208ENST00000472588 PLAC4Q8WY50 150 aa9.7□□□□□ -0.86
PAXBP1-208ENST00000472588 A8MU10 97 aa9.68□□□□□ -0.86
PAXBP1-208ENST00000472588 MT1BP07438 61 aa9.66□□□□□ -0.86
PAXBP1-208ENST00000472588 SPINT4Q6UDR6 99 aa9.58□□□□□ -0.88
PAXBP1-208ENST00000472588 CDC42SE1Q9NRR8 79 aa9.58□□□□□ -0.88
PAXBP1-208ENST00000472588 KRTAP12-1P59990 96 aa9.56□□□□□ -0.88
PAXBP1-208ENST00000472588 K7ERS5 55 aa9.51□□□□□ -0.89
PAXBP1-208ENST00000472588 KRTAP12-2P59991 146 aa9.5□□□□□ -0.89
PAXBP1-208ENST00000472588 KRTAP19-6Q3LI70 58 aa9.5□□□□□ -0.89
PAXBP1-208ENST00000472588 FCGBPQ9Y6R7 5405 aaPredicted RBP9.48□□□□□ -0.89
PAXBP1-208ENST00000472588 CAMK2N1Q7Z7J9 78 aa9.46□□□□□ -0.9
PAXBP1-208ENST00000472588 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
PAXBP1-208ENST00000472588 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
PAXBP1-208ENST00000472588 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.36□□□□□ -0.91
PAXBP1-208ENST00000472588 KRTAP10-5P60370 271 aa9.31□□□□□ -0.92
PAXBP1-208ENST00000472588 MT1XP80297 61 aa9.28□□□□□ -0.92
PAXBP1-208ENST00000472588 KRTAP9-7A8MTY7 169 aa9.22□□□□□ -0.93
PAXBP1-208ENST00000472588 MACF1Q9UPN3 7388 aaKnown RBP9.1□□□□□ -0.95
PAXBP1-208ENST00000472588 C10orf95Q9H7T3 257 aa9.05□□□□□ -0.96
PAXBP1-208ENST00000472588 PRO0628Q9UI54 55 aa9.03□□□□□ -0.96
PAXBP1-208ENST00000472588 ROMO1P60602 79 aa8.97□□□□□ -0.97
PAXBP1-208ENST00000472588 TNP1P09430 55 aa8.96□□□□□ -0.98
PAXBP1-208ENST00000472588 SYNE2Q8WXH0 6885 aaKnown RBP8.95□□□□□ -0.98
PAXBP1-208ENST00000472588 PMAIP1Q13794 54 aa8.91□□□□□ -0.98
PAXBP1-208ENST00000472588 KRTAP10-7P60409 375 aaPredicted RBP8.87□□□□□ -0.99
PAXBP1-208ENST00000472588 KRTAP25-1Q3LHN0 102 aa8.86□□□□□ -0.99
PAXBP1-208ENST00000472588 KRTAP10-12P60413 245 aa8.85□□□□□ -0.99
PAXBP1-208ENST00000472588 KRTAP6-3Q3LI67 103 aa8.82□□□□□ -1
PAXBP1-208ENST00000472588 KRTAP4-8A0A0G2JLE6 195 aa8.6□□□□□ -1.03
PAXBP1-208ENST00000472588 KRTAP4-8Q9BYQ9 185 aa8.6□□□□□ -1.03
PAXBP1-208ENST00000472588 KRTAP23-1A1A580 65 aa8.59□□□□□ -1.03
PAXBP1-208ENST00000472588 KRTAP5-9P26371 169 aa8.55□□□□□ -1.04
PAXBP1-208ENST00000472588 KRTAP8-1Q8IUC2 63 aa8.55□□□□□ -1.04
PAXBP1-208ENST00000472588 KMT2DO14686 5537 aa8.54□□□□□ -1.04
PAXBP1-208ENST00000472588 LCE3AQ5TA76 89 aa8.54□□□□□ -1.04
PAXBP1-208ENST00000472588 PP632Q6XCG6 107 aa8.52□□□□□ -1.05
PAXBP1-208ENST00000472588 MUC12Q9UKN1 5478 aa8.45□□□□□ -1.06
PAXBP1-208ENST00000472588 KTN1-AS1Q86SY8 53 aa8.41□□□□□ -1.06
PAXBP1-208ENST00000472588 SPRR2FQ96RM1 72 aa8.38□□□□□ -1.07
PAXBP1-208ENST00000472588 NEBP20929 6669 aa8.37□□□□□ -1.07
PAXBP1-208ENST00000472588 KRTAP19-5Q3LI72 72 aa8.3□□□□□ -1.08
PAXBP1-208ENST00000472588 MDN1Q9NU22 5596 aa8.28□□□□□ -1.08
PAXBP1-208ENST00000472588 KRTAP19-7Q3SYF9 63 aa8.28□□□□□ -1.08
PAXBP1-208ENST00000472588 PRAC1Q96KF2 57 aa8.28□□□□□ -1.08
PAXBP1-208ENST00000472588 KRTAP12-3P60328 96 aa8.26□□□□□ -1.09
PAXBP1-208ENST00000472588 SPRR2EP22531 72 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms