RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 OCR1Q9BZK8 76 aa4.21□□□□□ -1.74
SYN3-211ENST00000472027 FAM236AA0A1B0GUQ0 79 aa4.2□□□□□ -1.74
SYN3-211ENST00000472027 FAM236BA0A1B0GV22 79 aa4.2□□□□□ -1.74
SYN3-211ENST00000472027 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
SYN3-211ENST00000472027 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
SYN3-211ENST00000472027 MP68P56378 58 aa4.18□□□□□ -1.74
SYN3-211ENST00000472027 KLKP1Q107X0 134 aa4.18□□□□□ -1.74
SYN3-211ENST00000472027 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
SYN3-211ENST00000472027 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
SYN3-211ENST00000472027 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
SYN3-211ENST00000472027 SCGB1A1P11684 91 aa4.15□□□□□ -1.75
SYN3-211ENST00000472027 A8MUN3 132 aa4.14□□□□□ -1.75
SYN3-211ENST00000472027 H3BS24 57 aa4.14□□□□□ -1.75
SYN3-211ENST00000472027 H3BPC8 53 aa4.13□□□□□ -1.75
SYN3-211ENST00000472027 NDUFC1O43677 76 aa4.13□□□□□ -1.75
SYN3-211ENST00000472027 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
SYN3-211ENST00000472027 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
SYN3-211ENST00000472027 IMUPQ9GZP8 106 aa4.11□□□□□ -1.75
SYN3-211ENST00000472027 K7ERU9 68 aa4.1□□□□□ -1.75
SYN3-211ENST00000472027 MT-ATP8P03928 68 aa4.1□□□□□ -1.75
SYN3-211ENST00000472027 Q5VV11 94 aa4.09□□□□□ -1.75
SYN3-211ENST00000472027 H0YAA0 97 aa4.08□□□□□ -1.76
SYN3-211ENST00000472027 MT1BP07438 61 aa4.08□□□□□ -1.76
SYN3-211ENST00000472027 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
SYN3-211ENST00000472027 KRTAP4-8A0A0G2JLE6 195 aa4.07□□□□□ -1.76
SYN3-211ENST00000472027 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
SYN3-211ENST00000472027 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
SYN3-211ENST00000472027 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
SYN3-211ENST00000472027 TRAV7A0A075B6U4 112 aa4.04□□□□□ -1.76
SYN3-211ENST00000472027 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
SYN3-211ENST00000472027 SMIM20Q8N5G0 67 aa4.03□□□□□ -1.76
SYN3-211ENST00000472027 A6NN06 94 aa4.02□□□□□ -1.77
SYN3-211ENST00000472027 ACYP2P14621 99 aa3.98□□□□□ -1.77
SYN3-211ENST00000472027 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
SYN3-211ENST00000472027 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
SYN3-211ENST00000472027 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
SYN3-211ENST00000472027 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
SYN3-211ENST00000472027 P0C880 135 aa3.96□□□□□ -1.78
SYN3-211ENST00000472027 SNURFQ9Y675 71 aa3.95□□□□□ -1.78
SYN3-211ENST00000472027 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
SYN3-211ENST00000472027 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
SYN3-211ENST00000472027 C20orf197Q8N268 126 aa3.93□□□□□ -1.78
SYN3-211ENST00000472027 R4GN34 69 aa3.93□□□□□ -1.78
SYN3-211ENST00000472027 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
SYN3-211ENST00000472027 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
SYN3-211ENST00000472027 M0QZ58 72 aa3.9□□□□□ -1.79
SYN3-211ENST00000472027 SPTSSBQ8NFR3 76 aa3.9□□□□□ -1.79
SYN3-211ENST00000472027 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
SYN3-211ENST00000472027 SPANXA2-OT1Q8N9U9 137 aa3.89□□□□□ -1.79
SYN3-211ENST00000472027 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
SYN3-211ENST00000472027 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
SYN3-211ENST00000472027 MT1XP80297 61 aa3.84□□□□□ -1.79
SYN3-211ENST00000472027 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
SYN3-211ENST00000472027 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
SYN3-211ENST00000472027 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
SYN3-211ENST00000472027 COX7CP15954 63 aa3.82□□□□□ -1.8
SYN3-211ENST00000472027 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
SYN3-211ENST00000472027 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
SYN3-211ENST00000472027 COA5Q86WW8 74 aa3.77□□□□□ -1.81
SYN3-211ENST00000472027 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
SYN3-211ENST00000472027 KMT2DO14686 5537 aa3.75□□□□□ -1.81
SYN3-211ENST00000472027 CYSTM1Q9H1C7 97 aa3.75□□□□□ -1.81
SYN3-211ENST00000472027 H7BZZ5 65 aa3.74□□□□□ -1.81
SYN3-211ENST00000472027 KRTAP12-2P59991 146 aa3.73□□□□□ -1.81
SYN3-211ENST00000472027 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
SYN3-211ENST00000472027 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SYN3-211ENST00000472027 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
SYN3-211ENST00000472027 NEBP20929 6669 aa3.71□□□□□ -1.82
SYN3-211ENST00000472027 SEC61GP60059 68 aa3.7□□□□□ -1.82
SYN3-211ENST00000472027 ANAPC13Q9BS18 74 aa3.7□□□□□ -1.82
SYN3-211ENST00000472027 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
SYN3-211ENST00000472027 SERP1Q9Y6X1 66 aa3.69□□□□□ -1.82
SYN3-211ENST00000472027 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
SYN3-211ENST00000472027 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
SYN3-211ENST00000472027 MDN1Q9NU22 5596 aa3.65□□□□□ -1.82
SYN3-211ENST00000472027 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
SYN3-211ENST00000472027 A0A1B0GU33 70 aa3.63□□□□□ -1.83
SYN3-211ENST00000472027 CCDC179H3BU77 68 aa3.63□□□□□ -1.83
SYN3-211ENST00000472027 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
SYN3-211ENST00000472027 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
SYN3-211ENST00000472027 A0A0D9SG42 100 aa3.61□□□□□ -1.83
SYN3-211ENST00000472027 SPRR2EP22531 72 aa3.61□□□□□ -1.83
SYN3-211ENST00000472027 SPRR2BP35325 72 aa3.61□□□□□ -1.83
SYN3-211ENST00000472027 SPRR2AP35326 72 aa3.61□□□□□ -1.83
SYN3-211ENST00000472027 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
SYN3-211ENST00000472027 A0A1B0GU69 56 aa3.59□□□□□ -1.83
SYN3-211ENST00000472027 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
SYN3-211ENST00000472027 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
SYN3-211ENST00000472027 ATP5EP56381 51 aaPredicted RBP3.55□□□□□ -1.84
SYN3-211ENST00000472027 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
SYN3-211ENST00000472027 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
SYN3-211ENST00000472027 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
SYN3-211ENST00000472027 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
SYN3-211ENST00000472027 A8MU10 97 aa3.5□□□□□ -1.85
SYN3-211ENST00000472027 SPRR2DP22532 72 aa3.49□□□□□ -1.85
SYN3-211ENST00000472027 TMEM258P61165 79 aa3.49□□□□□ -1.85
SYN3-211ENST00000472027 PRR15LQ9BU68 103 aa3.49□□□□□ -1.85
SYN3-211ENST00000472027 LINC01558Q9Y6Z2 57 aa3.48□□□□□ -1.85
SYN3-211ENST00000472027 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
SYN3-211ENST00000472027 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms