RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 FAM236DA0A1B0GTK5 79 aa9.66□□□□□ -0.86
CHMP2B-204ENST00000472024 FAM236CP0DP71 79 aa9.66□□□□□ -0.86
CHMP2B-204ENST00000472024 TMEM258P61165 79 aa9.63□□□□□ -0.87
CHMP2B-204ENST00000472024 ATP5EP56381 51 aaPredicted RBP9.61□□□□□ -0.87
CHMP2B-204ENST00000472024 ACYP2P14621 99 aa9.57□□□□□ -0.88
CHMP2B-204ENST00000472024 MT1HP80294 61 aa9.51□□□□□ -0.89
CHMP2B-204ENST00000472024 LCE2AQ5TA79 106 aaPredicted RBP9.5□□□□□ -0.89
CHMP2B-204ENST00000472024 S4R3F8 94 aa9.49□□□□□ -0.89
CHMP2B-204ENST00000472024 LCA10Q71F78 164 aa9.45□□□□□ -0.9
CHMP2B-204ENST00000472024 COA5Q86WW8 74 aa9.42□□□□□ -0.9
CHMP2B-204ENST00000472024 CSAG1Q6PB30 78 aa9.34□□□□□ -0.91
CHMP2B-204ENST00000472024 CHKB-CPT1BH3BT56 60 aa9.33□□□□□ -0.92
CHMP2B-204ENST00000472024 SERP1Q9Y6X1 66 aa9.32□□□□□ -0.92
CHMP2B-204ENST00000472024 SPTSSBQ8NFR3 76 aa9.3□□□□□ -0.92
CHMP2B-204ENST00000472024 M0R2T5 61 aa9.26□□□□□ -0.93
CHMP2B-204ENST00000472024 FSIP2Q5CZC0 6907 aa9.22□□□□□ -0.93
CHMP2B-204ENST00000472024 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
CHMP2B-204ENST00000472024 RPS28P62857 69 aaKnown RBP9.21□□□□□ -0.94
CHMP2B-204ENST00000472024 H0YAA0 97 aa9.2□□□□□ -0.94
CHMP2B-204ENST00000472024 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
CHMP2B-204ENST00000472024 CRCT1Q9UGL9 99 aa9.2□□□□□ -0.94
CHMP2B-204ENST00000472024 KRTAP9-8Q9BYQ0 159 aa9.14□□□□□ -0.95
CHMP2B-204ENST00000472024 MT2AP02795 61 aa9.06□□□□□ -0.96
CHMP2B-204ENST00000472024 SMIM26A0A096LP01 95 aa9.02□□□□□ -0.97
CHMP2B-204ENST00000472024 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
CHMP2B-204ENST00000472024 LINC01558Q9Y6Z2 57 aa9.01□□□□□ -0.97
CHMP2B-204ENST00000472024 MT1FP04733 61 aa8.99□□□□□ -0.97
CHMP2B-204ENST00000472024 Q1T7F1 81 aa8.95□□□□□ -0.98
CHMP2B-204ENST00000472024 V9GYY9 64 aa8.94□□□□□ -0.98
CHMP2B-204ENST00000472024 P0C880 135 aa8.93□□□□□ -0.98
CHMP2B-204ENST00000472024 SEC61GP60059 68 aa8.92□□□□□ -0.98
CHMP2B-204ENST00000472024 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
CHMP2B-204ENST00000472024 CRIPTQ9P021 101 aa8.9□□□□□ -0.98
CHMP2B-204ENST00000472024 A0A1B0GU69 56 aa8.89□□□□□ -0.99
CHMP2B-204ENST00000472024 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
CHMP2B-204ENST00000472024 KRTAP9-3Q9BYQ3 159 aa8.84□□□□□ -0.99
CHMP2B-204ENST00000472024 LOC100996750A0A140TA64 210 aa8.8□□□□□ -1
CHMP2B-204ENST00000472024 KRTAP4-6Q9BYQ5 205 aa8.8□□□□□ -1
CHMP2B-204ENST00000472024 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
CHMP2B-204ENST00000472024 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
CHMP2B-204ENST00000472024 M0QZ58 72 aa8.75□□□□□ -1.01
CHMP2B-204ENST00000472024 A0A1B0GU33 70 aa8.74□□□□□ -1.01
CHMP2B-204ENST00000472024 R4GN34 69 aa8.71□□□□□ -1.02
CHMP2B-204ENST00000472024 Q5VV11 94 aa8.7□□□□□ -1.02
CHMP2B-204ENST00000472024 KRTAP9-7A8MTY7 169 aa8.69□□□□□ -1.02
CHMP2B-204ENST00000472024 PSPHP1O15172 72 aa8.68□□□□□ -1.02
CHMP2B-204ENST00000472024 KRTAP13-4Q3LI77 160 aa8.67□□□□□ -1.02
CHMP2B-204ENST00000472024 KRTAP19-8Q3LI54 63 aa8.62□□□□□ -1.03
CHMP2B-204ENST00000472024 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
CHMP2B-204ENST00000472024 UQCR11O14957 56 aa8.6□□□□□ -1.03
CHMP2B-204ENST00000472024 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
CHMP2B-204ENST00000472024 A6NN06 94 aa8.52□□□□□ -1.05
CHMP2B-204ENST00000472024 USH2AO75445 5202 aa8.52□□□□□ -1.05
CHMP2B-204ENST00000472024 MT1BP07438 61 aa8.48□□□□□ -1.05
CHMP2B-204ENST00000472024 MIR22HGQ0VDD5 57 aa8.45□□□□□ -1.06
CHMP2B-204ENST00000472024 A6NED7 52 aa8.44□□□□□ -1.06
CHMP2B-204ENST00000472024 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
CHMP2B-204ENST00000472024 A8MU10 97 aa8.4□□□□□ -1.06
CHMP2B-204ENST00000472024 A0A0D9SG42 100 aa8.38□□□□□ -1.07
CHMP2B-204ENST00000472024 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
CHMP2B-204ENST00000472024 SSPOA2VEC9 5147 aa8.33□□□□□ -1.08
CHMP2B-204ENST00000472024 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
CHMP2B-204ENST00000472024 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
CHMP2B-204ENST00000472024 KRTAP12-2P59991 146 aa8.27□□□□□ -1.09
CHMP2B-204ENST00000472024 FCGBPQ9Y6R7 5405 aaPredicted RBP8.23□□□□□ -1.09
CHMP2B-204ENST00000472024 KRTAP19-6Q3LI70 58 aa8.21□□□□□ -1.1
CHMP2B-204ENST00000472024 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
CHMP2B-204ENST00000472024 SYNE2Q8WXH0 6885 aaKnown RBP8.17□□□□□ -1.1
CHMP2B-204ENST00000472024 MACF1Q9UPN3 7388 aaKnown RBP8.16□□□□□ -1.1
CHMP2B-204ENST00000472024 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
CHMP2B-204ENST00000472024 MT1XP80297 61 aa8.13□□□□□ -1.11
CHMP2B-204ENST00000472024 K7ERS5 55 aa8.12□□□□□ -1.11
CHMP2B-204ENST00000472024 CAMK2N1Q7Z7J9 78 aa8.09□□□□□ -1.11
CHMP2B-204ENST00000472024 BRK1Q8WUW1 75 aa8.09□□□□□ -1.11
CHMP2B-204ENST00000472024 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
CHMP2B-204ENST00000472024 KRTAP4-8Q9BYQ9 185 aa8.01□□□□□ -1.13
CHMP2B-204ENST00000472024 SVIPQ8NHG7 77 aa7.93□□□□□ -1.14
CHMP2B-204ENST00000472024 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
CHMP2B-204ENST00000472024 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
CHMP2B-204ENST00000472024 KRTAP6-3Q3LI67 103 aa7.82□□□□□ -1.16
CHMP2B-204ENST00000472024 ROMO1P60602 79 aa7.76□□□□□ -1.17
CHMP2B-204ENST00000472024 NEBP20929 6669 aa7.75□□□□□ -1.17
CHMP2B-204ENST00000472024 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
CHMP2B-204ENST00000472024 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
CHMP2B-204ENST00000472024 TNP1P09430 55 aa7.7□□□□□ -1.18
CHMP2B-204ENST00000472024 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
CHMP2B-204ENST00000472024 PMAIP1Q13794 54 aa7.66□□□□□ -1.18
CHMP2B-204ENST00000472024 KRTAP4-12Q9BQ66 201 aa7.63□□□□□ -1.19
CHMP2B-204ENST00000472024 KRTAP20-1Q3LI63 56 aa7.55□□□□□ -1.2
CHMP2B-204ENST00000472024 LCE3BQ5TA77 95 aa7.53□□□□□ -1.2
CHMP2B-204ENST00000472024 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
CHMP2B-204ENST00000472024 MUC12Q9UKN1 5478 aa7.52□□□□□ -1.21
CHMP2B-204ENST00000472024 KMT2DO14686 5537 aa7.5□□□□□ -1.21
CHMP2B-204ENST00000472024 KRTAP9-9Q9BYP9 154 aa7.5□□□□□ -1.21
CHMP2B-204ENST00000472024 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
CHMP2B-204ENST00000472024 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
CHMP2B-204ENST00000472024 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
CHMP2B-204ENST00000472024 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
CHMP2B-204ENST00000472024 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
CHMP2B-204ENST00000472024 KRTAP5-9P26371 169 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms