RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
HMGN1-211ENST00000471260 A8MUU9 505 aa7.02□□□□□ -1.29
HMGN1-211ENST00000471260 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-211ENST00000471260 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-211ENST00000471260 LOC100996750A0A140TA64 210 aa7□□□□□ -1.29
HMGN1-211ENST00000471260 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
HMGN1-211ENST00000471260 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
HMGN1-211ENST00000471260 LINC00313P59037 77 aa6.97□□□□□ -1.29
HMGN1-211ENST00000471260 Q5VV11 94 aa6.97□□□□□ -1.29
HMGN1-211ENST00000471260 NOTCH2NLQ7Z3S9 236 aa6.96□□□□□ -1.3
HMGN1-211ENST00000471260 PSPHP1O15172 72 aa6.95□□□□□ -1.3
HMGN1-211ENST00000471260 LINC01558Q9Y6Z2 57 aa6.95□□□□□ -1.3
HMGN1-211ENST00000471260 FSIP2Q5CZC0 6907 aa6.94□□□□□ -1.3
HMGN1-211ENST00000471260 A8MUN3 132 aa6.94□□□□□ -1.3
HMGN1-211ENST00000471260 PRR15LQ9BU68 103 aa6.92□□□□□ -1.3
HMGN1-211ENST00000471260 HRES1P13985 223 aa6.91□□□□□ -1.3
HMGN1-211ENST00000471260 ACYP2P14621 99 aa6.91□□□□□ -1.3
HMGN1-211ENST00000471260 DMAC1Q96GE9 116 aa6.91□□□□□ -1.3
HMGN1-211ENST00000471260 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.3
HMGN1-211ENST00000471260 Q5W150 140 aa6.9□□□□□ -1.3
HMGN1-211ENST00000471260 IGKV2-30P06310 120 aa6.89□□□□□ -1.31
HMGN1-211ENST00000471260 CHKB-CPT1BH3BT56 60 aa6.87□□□□□ -1.31
HMGN1-211ENST00000471260 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
HMGN1-211ENST00000471260 A6NED7 52 aa6.81□□□□□ -1.32
HMGN1-211ENST00000471260 RBM12B-AS1Q9P1G2 102 aa6.81□□□□□ -1.32
HMGN1-211ENST00000471260 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
HMGN1-211ENST00000471260 C7orf65Q6ZTY9 151 aa6.75□□□□□ -1.33
HMGN1-211ENST00000471260 IGKV2D-30A0A075B6S6 120 aa6.73□□□□□ -1.33
HMGN1-211ENST00000471260 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
HMGN1-211ENST00000471260 LCA10Q71F78 164 aa6.71□□□□□ -1.34
HMGN1-211ENST00000471260 SPINK7P58062 85 aa6.69□□□□□ -1.34
HMGN1-211ENST00000471260 A0A1B0GU69 56 aa6.66□□□□□ -1.34
HMGN1-211ENST00000471260 MT2AP02795 61 aa6.66□□□□□ -1.34
HMGN1-211ENST00000471260 SPTSSBQ8NFR3 76 aa6.65□□□□□ -1.34
HMGN1-211ENST00000471260 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
HMGN1-211ENST00000471260 A6NN06 94 aa6.63□□□□□ -1.35
HMGN1-211ENST00000471260 A8MU10 97 aa6.62□□□□□ -1.35
HMGN1-211ENST00000471260 MT1FP04733 61 aa6.6□□□□□ -1.35
HMGN1-211ENST00000471260 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
HMGN1-211ENST00000471260 UQCR11O14957 56 aa6.58□□□□□ -1.36
HMGN1-211ENST00000471260 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
HMGN1-211ENST00000471260 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
HMGN1-211ENST00000471260 USH2AO75445 5202 aa6.54□□□□□ -1.36
HMGN1-211ENST00000471260 SEC61GP60059 68 aa6.53□□□□□ -1.36
HMGN1-211ENST00000471260 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
HMGN1-211ENST00000471260 SSPOA2VEC9 5147 aa6.5□□□□□ -1.37
HMGN1-211ENST00000471260 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-211ENST00000471260 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
HMGN1-211ENST00000471260 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
HMGN1-211ENST00000471260 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
HMGN1-211ENST00000471260 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
HMGN1-211ENST00000471260 FCGBPQ9Y6R7 5405 aaPredicted RBP6.39□□□□□ -1.39
HMGN1-211ENST00000471260 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
HMGN1-211ENST00000471260 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
HMGN1-211ENST00000471260 A0A1B0GU33 70 aa6.3□□□□□ -1.4
HMGN1-211ENST00000471260 MACF1Q9UPN3 7388 aaKnown RBP6.29□□□□□ -1.4
HMGN1-211ENST00000471260 H0YAA0 97 aa6.27□□□□□ -1.41
HMGN1-211ENST00000471260 K7ERS5 55 aa6.21□□□□□ -1.42
HMGN1-211ENST00000471260 S4R3F8 94 aa6.21□□□□□ -1.42
HMGN1-211ENST00000471260 CSAG1Q6PB30 78 aa6.2□□□□□ -1.42
HMGN1-211ENST00000471260 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
HMGN1-211ENST00000471260 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
HMGN1-211ENST00000471260 KRTAP4-12Q9BQ66 201 aa6.12□□□□□ -1.43
HMGN1-211ENST00000471260 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
HMGN1-211ENST00000471260 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
HMGN1-211ENST00000471260 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
HMGN1-211ENST00000471260 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
HMGN1-211ENST00000471260 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
HMGN1-211ENST00000471260 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
HMGN1-211ENST00000471260 MT1BP07438 61 aa6.05□□□□□ -1.44
HMGN1-211ENST00000471260 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
HMGN1-211ENST00000471260 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
HMGN1-211ENST00000471260 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
HMGN1-211ENST00000471260 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
HMGN1-211ENST00000471260 ROMO1P60602 79 aa5.98□□□□□ -1.45
HMGN1-211ENST00000471260 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
HMGN1-211ENST00000471260 M0QZ58 72 aa5.94□□□□□ -1.46
HMGN1-211ENST00000471260 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
HMGN1-211ENST00000471260 P0C880 135 aa5.91□□□□□ -1.46
HMGN1-211ENST00000471260 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
HMGN1-211ENST00000471260 A0A0D9SG42 100 aa5.85□□□□□ -1.47
HMGN1-211ENST00000471260 NEBP20929 6669 aa5.8□□□□□ -1.48
HMGN1-211ENST00000471260 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
HMGN1-211ENST00000471260 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
HMGN1-211ENST00000471260 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
HMGN1-211ENST00000471260 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
HMGN1-211ENST00000471260 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
HMGN1-211ENST00000471260 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
HMGN1-211ENST00000471260 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.5
HMGN1-211ENST00000471260 PLAC4Q8WY50 150 aa5.71□□□□□ -1.5
HMGN1-211ENST00000471260 R4GN34 69 aa5.71□□□□□ -1.5
HMGN1-211ENST00000471260 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
HMGN1-211ENST00000471260 MT1XP80297 61 aa5.66□□□□□ -1.5
HMGN1-211ENST00000471260 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
HMGN1-211ENST00000471260 KMT2DO14686 5537 aa5.64□□□□□ -1.51
HMGN1-211ENST00000471260 MDN1Q9NU22 5596 aa5.58□□□□□ -1.52
HMGN1-211ENST00000471260 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
HMGN1-211ENST00000471260 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
HMGN1-211ENST00000471260 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
HMGN1-211ENST00000471260 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms