RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 KRTAP3-1Q9BYR8 98 aa5□□□□□ -1.61
CLK2-204ENST00000471047 LORP23490 312 aaPredicted RBP4.99□□□□□ -1.61
CLK2-204ENST00000471047 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
CLK2-204ENST00000471047 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
CLK2-204ENST00000471047 A8MUN3 132 aa4.97□□□□□ -1.61
CLK2-204ENST00000471047 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
CLK2-204ENST00000471047 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
CLK2-204ENST00000471047 RBM12B-AS1Q9P1G2 102 aa4.95□□□□□ -1.62
CLK2-204ENST00000471047 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
CLK2-204ENST00000471047 ACYP2P14621 99 aa4.93□□□□□ -1.62
CLK2-204ENST00000471047 USH2AO75445 5202 aa4.92□□□□□ -1.62
CLK2-204ENST00000471047 H1FX-AS1Q4G0G2 97 aa4.89□□□□□ -1.63
CLK2-204ENST00000471047 COA5Q86WW8 74 aa4.89□□□□□ -1.63
CLK2-204ENST00000471047 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
CLK2-204ENST00000471047 FCGBPQ9Y6R7 5405 aaPredicted RBP4.87□□□□□ -1.63
CLK2-204ENST00000471047 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
CLK2-204ENST00000471047 M0R2T5 61 aa4.85□□□□□ -1.63
CLK2-204ENST00000471047 KRTAP3-3Q9BYR6 98 aa4.83□□□□□ -1.64
CLK2-204ENST00000471047 LCA10Q71F78 164 aa4.82□□□□□ -1.64
CLK2-204ENST00000471047 S4R3F8 94 aa4.82□□□□□ -1.64
CLK2-204ENST00000471047 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
CLK2-204ENST00000471047 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
CLK2-204ENST00000471047 SPTSSBQ8NFR3 76 aa4.76□□□□□ -1.65
CLK2-204ENST00000471047 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
CLK2-204ENST00000471047 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
CLK2-204ENST00000471047 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
CLK2-204ENST00000471047 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
CLK2-204ENST00000471047 Q1T7F1 81 aa4.7□□□□□ -1.66
CLK2-204ENST00000471047 LINC01558Q9Y6Z2 57 aa4.69□□□□□ -1.66
CLK2-204ENST00000471047 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
CLK2-204ENST00000471047 H0YAA0 97 aa4.67□□□□□ -1.66
CLK2-204ENST00000471047 V9GYY9 64 aa4.66□□□□□ -1.66
CLK2-204ENST00000471047 LCE2BO14633 110 aa4.64□□□□□ -1.67
CLK2-204ENST00000471047 KRTAP3-2Q9BYR7 98 aa4.63□□□□□ -1.67
CLK2-204ENST00000471047 A0A1B0GU69 56 aa4.61□□□□□ -1.67
CLK2-204ENST00000471047 SEC61GP60059 68 aa4.6□□□□□ -1.67
CLK2-204ENST00000471047 ADM2Q7Z4H4 148 aa4.59□□□□□ -1.67
CLK2-204ENST00000471047 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
CLK2-204ENST00000471047 P0C880 135 aa4.58□□□□□ -1.68
CLK2-204ENST00000471047 NEBP20929 6669 aa4.58□□□□□ -1.68
CLK2-204ENST00000471047 PSPHP1O15172 72 aa4.57□□□□□ -1.68
CLK2-204ENST00000471047 MT2AP02795 61 aa4.57□□□□□ -1.68
CLK2-204ENST00000471047 Q5VV11 94 aa4.57□□□□□ -1.68
CLK2-204ENST00000471047 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
CLK2-204ENST00000471047 MT1FP04733 61 aa4.55□□□□□ -1.68
CLK2-204ENST00000471047 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
CLK2-204ENST00000471047 A0A1B0GU33 70 aa4.51□□□□□ -1.69
CLK2-204ENST00000471047 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
CLK2-204ENST00000471047 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
CLK2-204ENST00000471047 UQCR11O14957 56 aa4.47□□□□□ -1.69
CLK2-204ENST00000471047 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
CLK2-204ENST00000471047 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
CLK2-204ENST00000471047 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
CLK2-204ENST00000471047 M0QZ58 72 aa4.45□□□□□ -1.7
CLK2-204ENST00000471047 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
CLK2-204ENST00000471047 R4GN34 69 aa4.44□□□□□ -1.7
CLK2-204ENST00000471047 A6NED7 52 aa4.43□□□□□ -1.7
CLK2-204ENST00000471047 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
CLK2-204ENST00000471047 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
CLK2-204ENST00000471047 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
CLK2-204ENST00000471047 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
CLK2-204ENST00000471047 A8MU10 97 aa4.36□□□□□ -1.71
CLK2-204ENST00000471047 A0A0D9SG42 100 aa4.33□□□□□ -1.72
CLK2-204ENST00000471047 A6NN06 94 aa4.32□□□□□ -1.72
CLK2-204ENST00000471047 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
CLK2-204ENST00000471047 LINC01554Q52M75 96 aa4.32□□□□□ -1.72
CLK2-204ENST00000471047 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
CLK2-204ENST00000471047 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
CLK2-204ENST00000471047 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
CLK2-204ENST00000471047 MT1BP07438 61 aa4.26□□□□□ -1.73
CLK2-204ENST00000471047 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
CLK2-204ENST00000471047 KMT2DO14686 5537 aa4.25□□□□□ -1.73
CLK2-204ENST00000471047 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
CLK2-204ENST00000471047 K7ERS5 55 aa4.2□□□□□ -1.74
CLK2-204ENST00000471047 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
CLK2-204ENST00000471047 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
CLK2-204ENST00000471047 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
CLK2-204ENST00000471047 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
CLK2-204ENST00000471047 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
CLK2-204ENST00000471047 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
CLK2-204ENST00000471047 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
CLK2-204ENST00000471047 MT1XP80297 61 aa4.09□□□□□ -1.75
CLK2-204ENST00000471047 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
CLK2-204ENST00000471047 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
CLK2-204ENST00000471047 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
CLK2-204ENST00000471047 ROMO1P60602 79 aa4.04□□□□□ -1.76
CLK2-204ENST00000471047 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
CLK2-204ENST00000471047 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
CLK2-204ENST00000471047 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
CLK2-204ENST00000471047 SPRR2EP22531 72 aa4.01□□□□□ -1.77
CLK2-204ENST00000471047 SPRR2BP35325 72 aa4.01□□□□□ -1.77
CLK2-204ENST00000471047 SPRR2AP35326 72 aa4.01□□□□□ -1.77
CLK2-204ENST00000471047 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
CLK2-204ENST00000471047 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
CLK2-204ENST00000471047 TNP1P09430 55 aa3.93□□□□□ -1.78
CLK2-204ENST00000471047 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
CLK2-204ENST00000471047 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
CLK2-204ENST00000471047 SVIPQ8NHG7 77 aa3.9□□□□□ -1.79
CLK2-204ENST00000471047 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
CLK2-204ENST00000471047 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms