RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
TOP3B-215ENST00000470338 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
TOP3B-215ENST00000470338 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
TOP3B-215ENST00000470338 MP68P56378 58 aa6.49□□□□□ -1.37
TOP3B-215ENST00000470338 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
TOP3B-215ENST00000470338 SERP2Q8N6R1 65 aa6.49□□□□□ -1.37
TOP3B-215ENST00000470338 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.48□□□□□ -1.37
TOP3B-215ENST00000470338 ANAPC13Q9BS18 74 aa6.47□□□□□ -1.37
TOP3B-215ENST00000470338 H3BPC8 53 aa6.45□□□□□ -1.38
TOP3B-215ENST00000470338 LINC00208Q96KT6 92 aa6.45□□□□□ -1.38
TOP3B-215ENST00000470338 COX7CP15954 63 aa6.42□□□□□ -1.38
TOP3B-215ENST00000470338 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
TOP3B-215ENST00000470338 A8MUN3 132 aa6.4□□□□□ -1.38
TOP3B-215ENST00000470338 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
TOP3B-215ENST00000470338 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
TOP3B-215ENST00000470338 C20orf197Q8N268 126 aa6.37□□□□□ -1.39
TOP3B-215ENST00000470338 NDUFC1O43677 76 aa6.36□□□□□ -1.39
TOP3B-215ENST00000470338 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
TOP3B-215ENST00000470338 SNURFQ9Y675 71 aa6.33□□□□□ -1.4
TOP3B-215ENST00000470338 H0YAA0 97 aa6.32□□□□□ -1.4
TOP3B-215ENST00000470338 MT1BP07438 61 aa6.32□□□□□ -1.4
TOP3B-215ENST00000470338 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
TOP3B-215ENST00000470338 Q5VV11 94 aa6.3□□□□□ -1.4
TOP3B-215ENST00000470338 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
TOP3B-215ENST00000470338 MACF1Q9UPN3 7388 aaKnown RBP6.27□□□□□ -1.41
TOP3B-215ENST00000470338 PCP4P48539 62 aa6.24□□□□□ -1.41
TOP3B-215ENST00000470338 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
TOP3B-215ENST00000470338 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
TOP3B-215ENST00000470338 H7BZZ5 65 aa6.2□□□□□ -1.42
TOP3B-215ENST00000470338 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
TOP3B-215ENST00000470338 A6NN06 94 aa6.19□□□□□ -1.42
TOP3B-215ENST00000470338 CYSTM1Q9H1C7 97 aa6.19□□□□□ -1.42
TOP3B-215ENST00000470338 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
TOP3B-215ENST00000470338 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
TOP3B-215ENST00000470338 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
TOP3B-215ENST00000470338 TMEM258P61165 79 aa6.12□□□□□ -1.43
TOP3B-215ENST00000470338 ACYP2P14621 99 aa6.11□□□□□ -1.43
TOP3B-215ENST00000470338 P0C880 135 aa6.1□□□□□ -1.43
TOP3B-215ENST00000470338 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
TOP3B-215ENST00000470338 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
TOP3B-215ENST00000470338 R4GN34 69 aa6.05□□□□□ -1.44
TOP3B-215ENST00000470338 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
TOP3B-215ENST00000470338 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
TOP3B-215ENST00000470338 M0QZ58 72 aa6□□□□□ -1.45
TOP3B-215ENST00000470338 COA5Q86WW8 74 aa5.99□□□□□ -1.45
TOP3B-215ENST00000470338 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
TOP3B-215ENST00000470338 MT1XP80297 61 aa5.95□□□□□ -1.46
TOP3B-215ENST00000470338 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
TOP3B-215ENST00000470338 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
TOP3B-215ENST00000470338 LINC01554Q52M75 96 aa5.89□□□□□ -1.47
TOP3B-215ENST00000470338 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
TOP3B-215ENST00000470338 MUC12Q9UKN1 5478 aa5.85□□□□□ -1.47
TOP3B-215ENST00000470338 KMT2DO14686 5537 aa5.8□□□□□ -1.48
TOP3B-215ENST00000470338 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
TOP3B-215ENST00000470338 RPS28P62857 69 aaKnown RBP5.8□□□□□ -1.48
TOP3B-215ENST00000470338 NEBP20929 6669 aa5.78□□□□□ -1.48
TOP3B-215ENST00000470338 SEC61GP60059 68 aa5.75□□□□□ -1.49
TOP3B-215ENST00000470338 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
TOP3B-215ENST00000470338 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
TOP3B-215ENST00000470338 MDN1Q9NU22 5596 aa5.71□□□□□ -1.5
TOP3B-215ENST00000470338 V9GYY9 64 aa5.71□□□□□ -1.5
TOP3B-215ENST00000470338 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
TOP3B-215ENST00000470338 A0A1B0GU69 56 aa5.69□□□□□ -1.5
TOP3B-215ENST00000470338 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
TOP3B-215ENST00000470338 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
TOP3B-215ENST00000470338 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
TOP3B-215ENST00000470338 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
TOP3B-215ENST00000470338 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
TOP3B-215ENST00000470338 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
TOP3B-215ENST00000470338 Q1T7F1 81 aa5.66□□□□□ -1.5
TOP3B-215ENST00000470338 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
TOP3B-215ENST00000470338 A0A1B0GU33 70 aa5.58□□□□□ -1.52
TOP3B-215ENST00000470338 SPRR2EP22531 72 aa5.58□□□□□ -1.52
TOP3B-215ENST00000470338 SPRR2BP35325 72 aa5.58□□□□□ -1.52
TOP3B-215ENST00000470338 SPRR2AP35326 72 aa5.58□□□□□ -1.52
TOP3B-215ENST00000470338 KRTAP20-1Q3LI63 56 aa5.58□□□□□ -1.52
TOP3B-215ENST00000470338 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
TOP3B-215ENST00000470338 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
TOP3B-215ENST00000470338 PSPHP1O15172 72 aa5.55□□□□□ -1.52
TOP3B-215ENST00000470338 LCE1AQ5T7P2 110 aa5.54□□□□□ -1.52
TOP3B-215ENST00000470338 A0A0D9SG42 100 aa5.53□□□□□ -1.52
TOP3B-215ENST00000470338 UQCR11O14957 56 aa5.49□□□□□ -1.53
TOP3B-215ENST00000470338 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
TOP3B-215ENST00000470338 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
TOP3B-215ENST00000470338 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
TOP3B-215ENST00000470338 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
TOP3B-215ENST00000470338 A6NED7 52 aa5.42□□□□□ -1.54
TOP3B-215ENST00000470338 SPRR2DP22532 72 aa5.39□□□□□ -1.55
TOP3B-215ENST00000470338 MIR22HGQ0VDD5 57 aa5.39□□□□□ -1.55
TOP3B-215ENST00000470338 A8MU10 97 aa5.36□□□□□ -1.55
TOP3B-215ENST00000470338 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
TOP3B-215ENST00000470338 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
TOP3B-215ENST00000470338 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
TOP3B-215ENST00000470338 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
TOP3B-215ENST00000470338 K7ERS5 55 aa5.26□□□□□ -1.57
TOP3B-215ENST00000470338 MT1EP04732 61 aa5.26□□□□□ -1.57
TOP3B-215ENST00000470338 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
TOP3B-215ENST00000470338 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
TOP3B-215ENST00000470338 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
TOP3B-215ENST00000470338 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms