RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 TNXBP22105 4242 aa9.14□□□□□ -0.95
PGAP1-208ENST00000470179 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
PGAP1-208ENST00000470179 LRP1Q07954 4544 aaKnown RBP9.13□□□□□ -0.95
PGAP1-208ENST00000470179 MYCBP2O75592 4640 aa9.13□□□□□ -0.95
PGAP1-208ENST00000470179 H0YAA0 97 aa9.12□□□□□ -0.95
PGAP1-208ENST00000470179 MT1HL1P0DM35 61 aa9.07□□□□□ -0.96
PGAP1-208ENST00000470179 KRTAP3-1Q9BYR8 98 aa9.05□□□□□ -0.96
PGAP1-208ENST00000470179 RPS29P62273 56 aaKnown RBP9.04□□□□□ -0.96
PGAP1-208ENST00000470179 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
PGAP1-208ENST00000470179 PCLOQ9Y6V0 5065 aa8.98□□□□□ -0.97
PGAP1-208ENST00000470179 H3BS24 57 aa8.98□□□□□ -0.97
PGAP1-208ENST00000470179 A0A1B0GU33 70 aa8.92□□□□□ -0.98
PGAP1-208ENST00000470179 A8MUU9 505 aa8.92□□□□□ -0.98
PGAP1-208ENST00000470179 J3QL48 77 aa8.87□□□□□ -0.99
PGAP1-208ENST00000470179 A0A0D9SG42 100 aa8.83□□□□□ -1
PGAP1-208ENST00000470179 LPAP08519 4548 aa8.83□□□□□ -1
PGAP1-208ENST00000470179 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
PGAP1-208ENST00000470179 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
PGAP1-208ENST00000470179 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
PGAP1-208ENST00000470179 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
PGAP1-208ENST00000470179 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.01
PGAP1-208ENST00000470179 C10orf95Q9H7T3 257 aa8.69□□□□□ -1.02
PGAP1-208ENST00000470179 ROMO1P60602 79 aa8.68□□□□□ -1.02
PGAP1-208ENST00000470179 HERC1Q15751 4861 aa8.65□□□□□ -1.02
PGAP1-208ENST00000470179 P0C880 135 aa8.61□□□□□ -1.03
PGAP1-208ENST00000470179 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
PGAP1-208ENST00000470179 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
PGAP1-208ENST00000470179 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.04
PGAP1-208ENST00000470179 HMCN2Q8NDA2 5059 aa8.58□□□□□ -1.04
PGAP1-208ENST00000470179 LRP2P98164 4655 aa8.55□□□□□ -1.04
PGAP1-208ENST00000470179 K7ERS5 55 aa8.52□□□□□ -1.05
PGAP1-208ENST00000470179 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
PGAP1-208ENST00000470179 XP32Q5T750 250 aa8.47□□□□□ -1.05
PGAP1-208ENST00000470179 RPL37P61927 97 aaKnown RBP8.47□□□□□ -1.05
PGAP1-208ENST00000470179 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
PGAP1-208ENST00000470179 KRTAP12-2P59991 146 aa8.43□□□□□ -1.06
PGAP1-208ENST00000470179 S4R3F8 94 aa8.36□□□□□ -1.07
PGAP1-208ENST00000470179 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
PGAP1-208ENST00000470179 SEC61BP60468 96 aaKnown RBP8.28□□□□□ -1.08
PGAP1-208ENST00000470179 NDUFAF8A1L188 74 aa8.28□□□□□ -1.08
PGAP1-208ENST00000470179 MUC2Q02817 5179 aa8.21□□□□□ -1.09
PGAP1-208ENST00000470179 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
PGAP1-208ENST00000470179 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.1
PGAP1-208ENST00000470179 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
PGAP1-208ENST00000470179 KRTAP4-1Q9BYQ7 146 aa8.1□□□□□ -1.11
PGAP1-208ENST00000470179 RNF213Q63HN8 5207 aa8.09□□□□□ -1.11
PGAP1-208ENST00000470179 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
PGAP1-208ENST00000470179 M0QZ58 72 aa7.99□□□□□ -1.13
PGAP1-208ENST00000470179 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
PGAP1-208ENST00000470179 R4GN34 69 aa7.88□□□□□ -1.15
PGAP1-208ENST00000470179 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
PGAP1-208ENST00000470179 FLGP20930 4061 aaPredicted RBP7.79□□□□□ -1.16
PGAP1-208ENST00000470179 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
PGAP1-208ENST00000470179 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
PGAP1-208ENST00000470179 MT1HP80294 61 aa7.65□□□□□ -1.19
PGAP1-208ENST00000470179 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
PGAP1-208ENST00000470179 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
PGAP1-208ENST00000470179 M0R2T5 61 aa7.45□□□□□ -1.22
PGAP1-208ENST00000470179 KRTAP9-8Q9BYQ0 159 aa7.35□□□□□ -1.23
PGAP1-208ENST00000470179 LUZP6Q538Z0 58 aa7.3□□□□□ -1.24
PGAP1-208ENST00000470179 MT2AP02795 61 aa7.28□□□□□ -1.24
PGAP1-208ENST00000470179 MT1FP04733 61 aa7.22□□□□□ -1.25
PGAP1-208ENST00000470179 A0A0A0MQY5 61 aa7.18□□□□□ -1.26
PGAP1-208ENST00000470179 KRTAP10-10P60014 251 aa7.16□□□□□ -1.26
PGAP1-208ENST00000470179 TNP1P09430 55 aa7.12□□□□□ -1.27
PGAP1-208ENST00000470179 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
PGAP1-208ENST00000470179 KRTAP9-3Q9BYQ3 159 aa7.1□□□□□ -1.27
PGAP1-208ENST00000470179 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
PGAP1-208ENST00000470179 LCE2DQ5TA82 110 aaPredicted RBP7.03□□□□□ -1.28
PGAP1-208ENST00000470179 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.28
PGAP1-208ENST00000470179 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
PGAP1-208ENST00000470179 LCE2BO14633 110 aa6.92□□□□□ -1.3
PGAP1-208ENST00000470179 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
PGAP1-208ENST00000470179 KMT2DO14686 5537 aa6.88□□□□□ -1.31
PGAP1-208ENST00000470179 USH2AO75445 5202 aa6.88□□□□□ -1.31
PGAP1-208ENST00000470179 SPRR5A0A1B0GTR4 108 aa6.84□□□□□ -1.31
PGAP1-208ENST00000470179 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
PGAP1-208ENST00000470179 MT1BP07438 61 aa6.8□□□□□ -1.32
PGAP1-208ENST00000470179 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
PGAP1-208ENST00000470179 KRTAP19-6Q3LI70 58 aa6.62□□□□□ -1.35
PGAP1-208ENST00000470179 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
PGAP1-208ENST00000470179 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
PGAP1-208ENST00000470179 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
PGAP1-208ENST00000470179 CRCT1Q9UGL9 99 aa6.54□□□□□ -1.36
PGAP1-208ENST00000470179 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
PGAP1-208ENST00000470179 MT1XP80297 61 aa6.52□□□□□ -1.37
PGAP1-208ENST00000470179 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
PGAP1-208ENST00000470179 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
PGAP1-208ENST00000470179 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.38
PGAP1-208ENST00000470179 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
PGAP1-208ENST00000470179 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
PGAP1-208ENST00000470179 KRTAP9-6A0A140TA67 174 aa6.39□□□□□ -1.39
PGAP1-208ENST00000470179 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
PGAP1-208ENST00000470179 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
PGAP1-208ENST00000470179 KRTAP19-5Q3LI72 72 aa6.24□□□□□ -1.41
PGAP1-208ENST00000470179 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
PGAP1-208ENST00000470179 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.43
PGAP1-208ENST00000470179 INE1O15225 51 aa6.08□□□□□ -1.44
PGAP1-208ENST00000470179 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
PGAP1-208ENST00000470179 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms