RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
RUNX1-213ENST00000469087 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
RUNX1-213ENST00000469087 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
RUNX1-213ENST00000469087 COA5Q86WW8 74 aa6.32□□□□□ -1.4
RUNX1-213ENST00000469087 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
RUNX1-213ENST00000469087 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
RUNX1-213ENST00000469087 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
RUNX1-213ENST00000469087 LCA10Q71F78 164 aa6.3□□□□□ -1.4
RUNX1-213ENST00000469087 S4R3F8 94 aa6.29□□□□□ -1.4
RUNX1-213ENST00000469087 CHKB-CPT1BH3BT56 60 aa6.26□□□□□ -1.41
RUNX1-213ENST00000469087 SERP1Q9Y6X1 66 aa6.26□□□□□ -1.41
RUNX1-213ENST00000469087 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
RUNX1-213ENST00000469087 MT1HP80294 61 aa6.23□□□□□ -1.41
RUNX1-213ENST00000469087 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
RUNX1-213ENST00000469087 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
RUNX1-213ENST00000469087 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
RUNX1-213ENST00000469087 M0R2T5 61 aa6.13□□□□□ -1.43
RUNX1-213ENST00000469087 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
RUNX1-213ENST00000469087 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
RUNX1-213ENST00000469087 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
RUNX1-213ENST00000469087 H0YAA0 97 aa6.02□□□□□ -1.45
RUNX1-213ENST00000469087 KRTAP10-6P60371 365 aaPredicted RBP6.01□□□□□ -1.45
RUNX1-213ENST00000469087 Q1T7F1 81 aa6.01□□□□□ -1.45
RUNX1-213ENST00000469087 ADM2Q7Z4H4 148 aa6.01□□□□□ -1.45
RUNX1-213ENST00000469087 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
RUNX1-213ENST00000469087 A0A1B0GU69 56 aa5.98□□□□□ -1.45
RUNX1-213ENST00000469087 P0C880 135 aa5.98□□□□□ -1.45
RUNX1-213ENST00000469087 SEC61GP60059 68 aa5.97□□□□□ -1.45
RUNX1-213ENST00000469087 V9GYY9 64 aa5.97□□□□□ -1.45
RUNX1-213ENST00000469087 MT2AP02795 61 aa5.94□□□□□ -1.46
RUNX1-213ENST00000469087 PSPHP1O15172 72 aa5.93□□□□□ -1.46
RUNX1-213ENST00000469087 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
RUNX1-213ENST00000469087 MT1FP04733 61 aa5.91□□□□□ -1.46
RUNX1-213ENST00000469087 H3BS24 57 aa5.89□□□□□ -1.47
RUNX1-213ENST00000469087 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
RUNX1-213ENST00000469087 Q5VV11 94 aa5.87□□□□□ -1.47
RUNX1-213ENST00000469087 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
RUNX1-213ENST00000469087 A0A1B0GU33 70 aa5.85□□□□□ -1.47
RUNX1-213ENST00000469087 KRTAP13-4Q3LI77 160 aa5.8□□□□□ -1.48
RUNX1-213ENST00000469087 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
RUNX1-213ENST00000469087 R4GN34 69 aa5.8□□□□□ -1.48
RUNX1-213ENST00000469087 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
RUNX1-213ENST00000469087 M0QZ58 72 aa5.78□□□□□ -1.48
RUNX1-213ENST00000469087 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
RUNX1-213ENST00000469087 UQCR11O14957 56 aa5.77□□□□□ -1.49
RUNX1-213ENST00000469087 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
RUNX1-213ENST00000469087 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
RUNX1-213ENST00000469087 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
RUNX1-213ENST00000469087 A6NED7 52 aa5.72□□□□□ -1.49
RUNX1-213ENST00000469087 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
RUNX1-213ENST00000469087 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
RUNX1-213ENST00000469087 A8MU10 97 aa5.68□□□□□ -1.5
RUNX1-213ENST00000469087 A0A0D9SG42 100 aa5.67□□□□□ -1.5
RUNX1-213ENST00000469087 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.5
RUNX1-213ENST00000469087 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
RUNX1-213ENST00000469087 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
RUNX1-213ENST00000469087 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
RUNX1-213ENST00000469087 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
RUNX1-213ENST00000469087 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
RUNX1-213ENST00000469087 USH2AO75445 5202 aa5.57□□□□□ -1.52
RUNX1-213ENST00000469087 MT1BP07438 61 aa5.57□□□□□ -1.52
RUNX1-213ENST00000469087 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
RUNX1-213ENST00000469087 A6NN06 94 aa5.56□□□□□ -1.52
RUNX1-213ENST00000469087 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
RUNX1-213ENST00000469087 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
RUNX1-213ENST00000469087 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
RUNX1-213ENST00000469087 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
RUNX1-213ENST00000469087 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
RUNX1-213ENST00000469087 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
RUNX1-213ENST00000469087 K7ERS5 55 aa5.42□□□□□ -1.54
RUNX1-213ENST00000469087 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
RUNX1-213ENST00000469087 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.54
RUNX1-213ENST00000469087 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
RUNX1-213ENST00000469087 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
RUNX1-213ENST00000469087 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
RUNX1-213ENST00000469087 MT1XP80297 61 aa5.35□□□□□ -1.55
RUNX1-213ENST00000469087 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
RUNX1-213ENST00000469087 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.56
RUNX1-213ENST00000469087 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
RUNX1-213ENST00000469087 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
RUNX1-213ENST00000469087 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
RUNX1-213ENST00000469087 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
RUNX1-213ENST00000469087 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
RUNX1-213ENST00000469087 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
RUNX1-213ENST00000469087 ROMO1P60602 79 aa5.2□□□□□ -1.58
RUNX1-213ENST00000469087 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
RUNX1-213ENST00000469087 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
RUNX1-213ENST00000469087 TNP1P09430 55 aa5.11□□□□□ -1.59
RUNX1-213ENST00000469087 LCE1DQ5T752 114 aa5.09□□□□□ -1.6
RUNX1-213ENST00000469087 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
RUNX1-213ENST00000469087 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
RUNX1-213ENST00000469087 KMT2DO14686 5537 aa5.03□□□□□ -1.6
RUNX1-213ENST00000469087 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.61
RUNX1-213ENST00000469087 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
RUNX1-213ENST00000469087 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
RUNX1-213ENST00000469087 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
RUNX1-213ENST00000469087 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
RUNX1-213ENST00000469087 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
RUNX1-213ENST00000469087 A0A0A0MQY5 61 aa4.88□□□□□ -1.63
RUNX1-213ENST00000469087 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms