RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 Q5W150 140 aa4.26□□□□□ -1.73
HDAC6-216ENST00000468949 SPINK7P58062 85 aa4.25□□□□□ -1.73
HDAC6-216ENST00000468949 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
HDAC6-216ENST00000468949 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
HDAC6-216ENST00000468949 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
HDAC6-216ENST00000468949 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
HDAC6-216ENST00000468949 RBM12B-AS1Q9P1G2 102 aa4.23□□□□□ -1.73
HDAC6-216ENST00000468949 H3BPC8 53 aa4.22□□□□□ -1.73
HDAC6-216ENST00000468949 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
HDAC6-216ENST00000468949 LINC00208Q96KT6 92 aa4.22□□□□□ -1.73
HDAC6-216ENST00000468949 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
HDAC6-216ENST00000468949 C1orf64Q8NEQ6 169 aa4.21□□□□□ -1.74
HDAC6-216ENST00000468949 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
HDAC6-216ENST00000468949 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
HDAC6-216ENST00000468949 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
HDAC6-216ENST00000468949 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
HDAC6-216ENST00000468949 SMIM26A0A096LP01 95 aa4.17□□□□□ -1.74
HDAC6-216ENST00000468949 CYP4F30PQ9H0H9 118 aa4.17□□□□□ -1.74
HDAC6-216ENST00000468949 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
HDAC6-216ENST00000468949 HRES1P13985 223 aa4.16□□□□□ -1.74
HDAC6-216ENST00000468949 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
HDAC6-216ENST00000468949 C20orf197Q8N268 126 aa4.15□□□□□ -1.75
HDAC6-216ENST00000468949 CYSTM1Q9H1C7 97 aa4.15□□□□□ -1.75
HDAC6-216ENST00000468949 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
HDAC6-216ENST00000468949 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
HDAC6-216ENST00000468949 SNURFQ9Y675 71 aa4.13□□□□□ -1.75
HDAC6-216ENST00000468949 KLKP1Q107X0 134 aa4.1□□□□□ -1.75
HDAC6-216ENST00000468949 MPLKIPQ8TAP9 179 aa4.1□□□□□ -1.75
HDAC6-216ENST00000468949 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
HDAC6-216ENST00000468949 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
HDAC6-216ENST00000468949 NDUFC1O43677 76 aa4.08□□□□□ -1.76
HDAC6-216ENST00000468949 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
HDAC6-216ENST00000468949 A8MUN3 132 aa4.07□□□□□ -1.76
HDAC6-216ENST00000468949 M0R2T5 61 aa4.07□□□□□ -1.76
HDAC6-216ENST00000468949 MT1HP80294 61 aa4.06□□□□□ -1.76
HDAC6-216ENST00000468949 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
HDAC6-216ENST00000468949 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
HDAC6-216ENST00000468949 S4R3F8 94 aa4.04□□□□□ -1.76
HDAC6-216ENST00000468949 SPANXA2-OT1Q8N9U9 137 aa4.03□□□□□ -1.76
HDAC6-216ENST00000468949 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
HDAC6-216ENST00000468949 CHKB-CPT1BH3BT56 60 aa4.01□□□□□ -1.77
HDAC6-216ENST00000468949 H7BZZ5 65 aa4.01□□□□□ -1.77
HDAC6-216ENST00000468949 ACYP2P14621 99 aa4.01□□□□□ -1.77
HDAC6-216ENST00000468949 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-216ENST00000468949 LCA10Q71F78 164 aa3.97□□□□□ -1.77
HDAC6-216ENST00000468949 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
HDAC6-216ENST00000468949 SPTSSBQ8NFR3 76 aa3.96□□□□□ -1.78
HDAC6-216ENST00000468949 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
HDAC6-216ENST00000468949 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
HDAC6-216ENST00000468949 COA5Q86WW8 74 aa3.92□□□□□ -1.78
HDAC6-216ENST00000468949 Q1T7F1 81 aa3.91□□□□□ -1.78
HDAC6-216ENST00000468949 A6NN06 94 aa3.87□□□□□ -1.79
HDAC6-216ENST00000468949 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
HDAC6-216ENST00000468949 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
HDAC6-216ENST00000468949 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
HDAC6-216ENST00000468949 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
HDAC6-216ENST00000468949 H0YAA0 97 aa3.81□□□□□ -1.8
HDAC6-216ENST00000468949 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
HDAC6-216ENST00000468949 MT2AP02795 61 aa3.8□□□□□ -1.8
HDAC6-216ENST00000468949 LINC01554Q52M75 96 aa3.78□□□□□ -1.8
HDAC6-216ENST00000468949 Q5VV11 94 aa3.78□□□□□ -1.8
HDAC6-216ENST00000468949 PSPHP1O15172 72 aa3.77□□□□□ -1.81
HDAC6-216ENST00000468949 MT1FP04733 61 aa3.77□□□□□ -1.81
HDAC6-216ENST00000468949 A0A1B0GU69 56 aa3.75□□□□□ -1.81
HDAC6-216ENST00000468949 A8MU10 97 aa3.75□□□□□ -1.81
HDAC6-216ENST00000468949 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
HDAC6-216ENST00000468949 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
HDAC6-216ENST00000468949 USH2AO75445 5202 aa3.74□□□□□ -1.81
HDAC6-216ENST00000468949 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
HDAC6-216ENST00000468949 R4GN34 69 aa3.73□□□□□ -1.81
HDAC6-216ENST00000468949 P0C880 135 aa3.72□□□□□ -1.81
HDAC6-216ENST00000468949 SSPOA2VEC9 5147 aa3.71□□□□□ -1.82
HDAC6-216ENST00000468949 M0QZ58 72 aa3.7□□□□□ -1.82
HDAC6-216ENST00000468949 LINC01558Q9Y6Z2 57 aa3.69□□□□□ -1.82
HDAC6-216ENST00000468949 A6NED7 52 aa3.67□□□□□ -1.82
HDAC6-216ENST00000468949 A0A1B0GU33 70 aa3.66□□□□□ -1.82
HDAC6-216ENST00000468949 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
HDAC6-216ENST00000468949 SPRR2GQ9BYE4 73 aa3.64□□□□□ -1.83
HDAC6-216ENST00000468949 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
HDAC6-216ENST00000468949 UQCR11O14957 56 aa3.59□□□□□ -1.83
HDAC6-216ENST00000468949 A0A0D9SG42 100 aa3.58□□□□□ -1.84
HDAC6-216ENST00000468949 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
HDAC6-216ENST00000468949 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
HDAC6-216ENST00000468949 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
HDAC6-216ENST00000468949 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
HDAC6-216ENST00000468949 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
HDAC6-216ENST00000468949 KRTAP13-4Q3LI77 160 aa3.56□□□□□ -1.84
HDAC6-216ENST00000468949 MIR22HGQ0VDD5 57 aa3.53□□□□□ -1.84
HDAC6-216ENST00000468949 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
HDAC6-216ENST00000468949 MT1BP07438 61 aa3.51□□□□□ -1.85
HDAC6-216ENST00000468949 ROMO1P60602 79 aa3.51□□□□□ -1.85
HDAC6-216ENST00000468949 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
HDAC6-216ENST00000468949 K7ERS5 55 aa3.49□□□□□ -1.85
HDAC6-216ENST00000468949 PRO2289Q9P1D8 64 aa3.48□□□□□ -1.85
HDAC6-216ENST00000468949 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
HDAC6-216ENST00000468949 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
HDAC6-216ENST00000468949 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
HDAC6-216ENST00000468949 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
HDAC6-216ENST00000468949 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
HDAC6-216ENST00000468949 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms