RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
TMEM39A-205ENST00000468676 KRTAP4-11Q9BYQ6 195 aa7.03□□□□□ -1.28
TMEM39A-205ENST00000468676 OCR1Q9BZK8 76 aa7.03□□□□□ -1.28
TMEM39A-205ENST00000468676 S4R3F8 94 aa7.03□□□□□ -1.28
TMEM39A-205ENST00000468676 MP68P56378 58 aa7.01□□□□□ -1.29
TMEM39A-205ENST00000468676 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
TMEM39A-205ENST00000468676 C5orf47Q569G3 176 aa7□□□□□ -1.29
TMEM39A-205ENST00000468676 IMUPQ9GZP8 106 aa7□□□□□ -1.29
TMEM39A-205ENST00000468676 SCGB1A1P11684 91 aa6.99□□□□□ -1.29
TMEM39A-205ENST00000468676 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
TMEM39A-205ENST00000468676 LINC00208Q96KT6 92 aa6.98□□□□□ -1.29
TMEM39A-205ENST00000468676 LCE4AQ5TA78 99 aa6.97□□□□□ -1.29
TMEM39A-205ENST00000468676 H3BPC8 53 aa6.96□□□□□ -1.3
TMEM39A-205ENST00000468676 LCA10Q71F78 164 aa6.96□□□□□ -1.3
TMEM39A-205ENST00000468676 A8MUN3 132 aa6.91□□□□□ -1.3
TMEM39A-205ENST00000468676 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
TMEM39A-205ENST00000468676 USH2AO75445 5202 aa6.89□□□□□ -1.31
TMEM39A-205ENST00000468676 KLKP1Q107X0 134 aa6.89□□□□□ -1.31
TMEM39A-205ENST00000468676 SMIM20Q8N5G0 67 aa6.88□□□□□ -1.31
TMEM39A-205ENST00000468676 FAM236AA0A1B0GUQ0 79 aa6.85□□□□□ -1.31
TMEM39A-205ENST00000468676 FAM236BA0A1B0GV22 79 aa6.85□□□□□ -1.31
TMEM39A-205ENST00000468676 NDUFC1O43677 76 aa6.84□□□□□ -1.31
TMEM39A-205ENST00000468676 TRAV7A0A075B6U4 112 aa6.82□□□□□ -1.32
TMEM39A-205ENST00000468676 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
TMEM39A-205ENST00000468676 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
TMEM39A-205ENST00000468676 DMAC1Q96GE9 116 aa6.74□□□□□ -1.33
TMEM39A-205ENST00000468676 H0YAA0 97 aa6.73□□□□□ -1.33
TMEM39A-205ENST00000468676 CRIPTQ9P021 101 aa6.71□□□□□ -1.34
TMEM39A-205ENST00000468676 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
TMEM39A-205ENST00000468676 SPRR2GQ9BYE4 73 aa6.69□□□□□ -1.34
TMEM39A-205ENST00000468676 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
TMEM39A-205ENST00000468676 FCGBPQ9Y6R7 5405 aaPredicted RBP6.65□□□□□ -1.34
TMEM39A-205ENST00000468676 ACYP2P14621 99 aa6.65□□□□□ -1.34
TMEM39A-205ENST00000468676 SERP2Q8N6R1 65 aa6.65□□□□□ -1.34
TMEM39A-205ENST00000468676 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
TMEM39A-205ENST00000468676 Q5VV11 94 aa6.62□□□□□ -1.35
TMEM39A-205ENST00000468676 ADM2Q7Z4H4 148 aa6.62□□□□□ -1.35
TMEM39A-205ENST00000468676 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
TMEM39A-205ENST00000468676 SNURFQ9Y675 71 aa6.61□□□□□ -1.35
TMEM39A-205ENST00000468676 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
TMEM39A-205ENST00000468676 SPTSSBQ8NFR3 76 aa6.57□□□□□ -1.36
TMEM39A-205ENST00000468676 SPANXA2-OT1Q8N9U9 137 aa6.56□□□□□ -1.36
TMEM39A-205ENST00000468676 MT1BP07438 61 aa6.55□□□□□ -1.36
TMEM39A-205ENST00000468676 CHKB-CPT1BH3BT56 60 aa6.51□□□□□ -1.37
TMEM39A-205ENST00000468676 COX7CP15954 63 aa6.49□□□□□ -1.37
TMEM39A-205ENST00000468676 P0C880 135 aa6.47□□□□□ -1.37
TMEM39A-205ENST00000468676 R4GN34 69 aa6.47□□□□□ -1.37
TMEM39A-205ENST00000468676 A6NN06 94 aa6.45□□□□□ -1.38
TMEM39A-205ENST00000468676 M0QZ58 72 aa6.4□□□□□ -1.38
TMEM39A-205ENST00000468676 KRTAP10-5P60370 271 aa6.4□□□□□ -1.38
TMEM39A-205ENST00000468676 PLAC4Q8WY50 150 aa6.35□□□□□ -1.39
TMEM39A-205ENST00000468676 ANAPC13Q9BS18 74 aa6.35□□□□□ -1.39
TMEM39A-205ENST00000468676 MACF1Q9UPN3 7388 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-205ENST00000468676 H7BZZ5 65 aa6.34□□□□□ -1.39
TMEM39A-205ENST00000468676 COA5Q86WW8 74 aa6.33□□□□□ -1.4
TMEM39A-205ENST00000468676 PRO2289Q9P1D8 64 aa6.29□□□□□ -1.4
TMEM39A-205ENST00000468676 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
TMEM39A-205ENST00000468676 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
TMEM39A-205ENST00000468676 KRTAP6-3Q3LI67 103 aa6.23□□□□□ -1.41
TMEM39A-205ENST00000468676 SEC61GP60059 68 aa6.22□□□□□ -1.41
TMEM39A-205ENST00000468676 SYNE2Q8WXH0 6885 aaKnown RBP6.22□□□□□ -1.41
TMEM39A-205ENST00000468676 MT1XP80297 61 aa6.2□□□□□ -1.42
TMEM39A-205ENST00000468676 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
TMEM39A-205ENST00000468676 CCDC179H3BU77 68 aa6.18□□□□□ -1.42
TMEM39A-205ENST00000468676 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
TMEM39A-205ENST00000468676 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
TMEM39A-205ENST00000468676 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
TMEM39A-205ENST00000468676 A0A1B0GU33 70 aa6.06□□□□□ -1.44
TMEM39A-205ENST00000468676 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
TMEM39A-205ENST00000468676 A0A1B0GU69 56 aa6.03□□□□□ -1.44
TMEM39A-205ENST00000468676 KRTAP5-9P26371 169 aa6.02□□□□□ -1.45
TMEM39A-205ENST00000468676 TMEM258P61165 79 aa6.02□□□□□ -1.45
TMEM39A-205ENST00000468676 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
TMEM39A-205ENST00000468676 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
TMEM39A-205ENST00000468676 A0A0D9SG42 100 aa5.96□□□□□ -1.46
TMEM39A-205ENST00000468676 PRR15LQ9BU68 103 aa5.94□□□□□ -1.46
TMEM39A-205ENST00000468676 KMT2DO14686 5537 aa5.92□□□□□ -1.46
TMEM39A-205ENST00000468676 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
TMEM39A-205ENST00000468676 MUC12Q9UKN1 5478 aa5.92□□□□□ -1.46
TMEM39A-205ENST00000468676 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
TMEM39A-205ENST00000468676 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
TMEM39A-205ENST00000468676 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.46
TMEM39A-205ENST00000468676 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
TMEM39A-205ENST00000468676 SPINT4Q6UDR6 99 aa5.88□□□□□ -1.47
TMEM39A-205ENST00000468676 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
TMEM39A-205ENST00000468676 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
TMEM39A-205ENST00000468676 NEBP20929 6669 aa5.85□□□□□ -1.47
TMEM39A-205ENST00000468676 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
TMEM39A-205ENST00000468676 A8MU10 97 aa5.77□□□□□ -1.49
TMEM39A-205ENST00000468676 SPRR2EP22531 72 aa5.75□□□□□ -1.49
TMEM39A-205ENST00000468676 SPRR2BP35325 72 aa5.75□□□□□ -1.49
TMEM39A-205ENST00000468676 SPRR2AP35326 72 aa5.75□□□□□ -1.49
TMEM39A-205ENST00000468676 UQCR11O14957 56 aa5.73□□□□□ -1.49
TMEM39A-205ENST00000468676 V9GYY9 64 aa5.7□□□□□ -1.5
TMEM39A-205ENST00000468676 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
TMEM39A-205ENST00000468676 KRTAP20-1Q3LI63 56 aa5.67□□□□□ -1.5
TMEM39A-205ENST00000468676 PCP4P48539 62 aa5.65□□□□□ -1.5
TMEM39A-205ENST00000468676 Q1T7F1 81 aa5.63□□□□□ -1.51
TMEM39A-205ENST00000468676 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
TMEM39A-205ENST00000468676 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms