RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 FAM240AA0A1B0GVK7 77 aa7.88□□□□□ -1.15
SSBP1-207ENST00000468267 CYP4F30PQ9H0H9 118 aa7.88□□□□□ -1.15
SSBP1-207ENST00000468267 CSAG1Q6PB30 78 aa7.87□□□□□ -1.15
SSBP1-207ENST00000468267 LCA10Q71F78 164 aa7.86□□□□□ -1.15
SSBP1-207ENST00000468267 ATP5EP2Q5VTU8 51 aa7.85□□□□□ -1.15
SSBP1-207ENST00000468267 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
SSBP1-207ENST00000468267 FAM236AA0A1B0GUQ0 79 aa7.81□□□□□ -1.16
SSBP1-207ENST00000468267 FAM236BA0A1B0GV22 79 aa7.81□□□□□ -1.16
SSBP1-207ENST00000468267 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
SSBP1-207ENST00000468267 MACF1Q9UPN3 7388 aaKnown RBP7.81□□□□□ -1.16
SSBP1-207ENST00000468267 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
SSBP1-207ENST00000468267 KRTAP5-3Q6L8H2 238 aa7.8□□□□□ -1.16
SSBP1-207ENST00000468267 UQCRQO14949 82 aa7.77□□□□□ -1.17
SSBP1-207ENST00000468267 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
SSBP1-207ENST00000468267 H0Y9P7 68 aa7.72□□□□□ -1.17
SSBP1-207ENST00000468267 ATOX1O00244 68 aa7.72□□□□□ -1.17
SSBP1-207ENST00000468267 SYNE2Q8WXH0 6885 aaKnown RBP7.71□□□□□ -1.18
SSBP1-207ENST00000468267 A0A087WVE0 104 aa7.71□□□□□ -1.18
SSBP1-207ENST00000468267 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
SSBP1-207ENST00000468267 KLKP1Q107X0 134 aa7.68□□□□□ -1.18
SSBP1-207ENST00000468267 A0A1B0GV90 55 aa7.67□□□□□ -1.18
SSBP1-207ENST00000468267 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
SSBP1-207ENST00000468267 MT1BP07438 61 aa7.66□□□□□ -1.18
SSBP1-207ENST00000468267 Q5VV11 94 aa7.65□□□□□ -1.18
SSBP1-207ENST00000468267 LINC00208Q96KT6 92 aa7.6□□□□□ -1.19
SSBP1-207ENST00000468267 OCR1Q9BZK8 76 aa7.6□□□□□ -1.19
SSBP1-207ENST00000468267 NDUFC1O43677 76 aa7.59□□□□□ -1.19
SSBP1-207ENST00000468267 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
SSBP1-207ENST00000468267 A8MUN3 132 aa7.58□□□□□ -1.2
SSBP1-207ENST00000468267 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
SSBP1-207ENST00000468267 A6NN06 94 aa7.56□□□□□ -1.2
SSBP1-207ENST00000468267 MP68P56378 58 aa7.56□□□□□ -1.2
SSBP1-207ENST00000468267 KRTAP6-3Q3LI67 103 aa7.55□□□□□ -1.2
SSBP1-207ENST00000468267 H0YAA0 97 aa7.53□□□□□ -1.2
SSBP1-207ENST00000468267 J3QR89 54 aa7.52□□□□□ -1.21
SSBP1-207ENST00000468267 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
SSBP1-207ENST00000468267 H3BPC8 53 aa7.46□□□□□ -1.22
SSBP1-207ENST00000468267 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
SSBP1-207ENST00000468267 SCGB1A1P11684 91 aa7.42□□□□□ -1.22
SSBP1-207ENST00000468267 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
SSBP1-207ENST00000468267 MUC12Q9UKN1 5478 aa7.28□□□□□ -1.24
SSBP1-207ENST00000468267 P0C880 135 aa7.28□□□□□ -1.24
SSBP1-207ENST00000468267 K7ERU9 68 aa7.27□□□□□ -1.25
SSBP1-207ENST00000468267 C20orf197Q8N268 126 aa7.27□□□□□ -1.25
SSBP1-207ENST00000468267 NEBP20929 6669 aa7.27□□□□□ -1.25
SSBP1-207ENST00000468267 MT-ATP8P03928 68 aa7.26□□□□□ -1.25
SSBP1-207ENST00000468267 R4GN34 69 aa7.25□□□□□ -1.25
SSBP1-207ENST00000468267 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
SSBP1-207ENST00000468267 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
SSBP1-207ENST00000468267 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
SSBP1-207ENST00000468267 KRTAP5-9P26371 169 aa7.2□□□□□ -1.26
SSBP1-207ENST00000468267 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
SSBP1-207ENST00000468267 M0QZ58 72 aa7.19□□□□□ -1.26
SSBP1-207ENST00000468267 ACYP2P14621 99 aa7.19□□□□□ -1.26
SSBP1-207ENST00000468267 MT1XP80297 61 aa7.19□□□□□ -1.26
SSBP1-207ENST00000468267 KMT2DO14686 5537 aa7.16□□□□□ -1.26
SSBP1-207ENST00000468267 MDN1Q9NU22 5596 aa7.11□□□□□ -1.27
SSBP1-207ENST00000468267 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
SSBP1-207ENST00000468267 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
SSBP1-207ENST00000468267 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
SSBP1-207ENST00000468267 CHKB-CPT1BH3BT56 60 aa7.03□□□□□ -1.28
SSBP1-207ENST00000468267 KRTAP12-2P59991 146 aa7.02□□□□□ -1.29
SSBP1-207ENST00000468267 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
SSBP1-207ENST00000468267 SPRR2FQ96RM1 72 aa6.98□□□□□ -1.29
SSBP1-207ENST00000468267 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
SSBP1-207ENST00000468267 SERP2Q8N6R1 65 aa6.97□□□□□ -1.29
SSBP1-207ENST00000468267 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
SSBP1-207ENST00000468267 SPRR2EP22531 72 aa6.87□□□□□ -1.31
SSBP1-207ENST00000468267 SPRR2BP35325 72 aa6.87□□□□□ -1.31
SSBP1-207ENST00000468267 SPRR2AP35326 72 aa6.87□□□□□ -1.31
SSBP1-207ENST00000468267 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
SSBP1-207ENST00000468267 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
SSBP1-207ENST00000468267 KRTAP2-3P0C7H8 128 aa6.81□□□□□ -1.32
SSBP1-207ENST00000468267 KRTAP2-4Q9BYR9 128 aa6.81□□□□□ -1.32
SSBP1-207ENST00000468267 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
SSBP1-207ENST00000468267 LCE1AQ5T7P2 110 aa6.8□□□□□ -1.32
SSBP1-207ENST00000468267 COA5Q86WW8 74 aa6.78□□□□□ -1.32
SSBP1-207ENST00000468267 COX7CP15954 63 aa6.74□□□□□ -1.33
SSBP1-207ENST00000468267 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
SSBP1-207ENST00000468267 SEC61GP60059 68 aa6.67□□□□□ -1.34
SSBP1-207ENST00000468267 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
SSBP1-207ENST00000468267 SERP1Q9Y6X1 66 aa6.66□□□□□ -1.34
SSBP1-207ENST00000468267 H7BZZ5 65 aa6.65□□□□□ -1.34
SSBP1-207ENST00000468267 SPRR2DP22532 72 aa6.64□□□□□ -1.35
SSBP1-207ENST00000468267 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
SSBP1-207ENST00000468267 KRTAP2-2Q9BYT5 123 aa6.59□□□□□ -1.35
SSBP1-207ENST00000468267 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.35
SSBP1-207ENST00000468267 A0A0D9SG42 100 aa6.58□□□□□ -1.36
SSBP1-207ENST00000468267 A0A1B0GU33 70 aa6.57□□□□□ -1.36
SSBP1-207ENST00000468267 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
SSBP1-207ENST00000468267 ANAPC13Q9BS18 74 aa6.57□□□□□ -1.36
SSBP1-207ENST00000468267 KRTAP15-1Q3LI76 137 aa6.55□□□□□ -1.36
SSBP1-207ENST00000468267 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
SSBP1-207ENST00000468267 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
SSBP1-207ENST00000468267 A0A1B0GU69 56 aa6.43□□□□□ -1.38
SSBP1-207ENST00000468267 KRTAP19-7Q3SYF9 63 aa6.42□□□□□ -1.38
SSBP1-207ENST00000468267 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
SSBP1-207ENST00000468267 SMIM26A0A096LP01 95 aa6.38□□□□□ -1.39
SSBP1-207ENST00000468267 MT1EP04732 61 aa6.37□□□□□ -1.39
SSBP1-207ENST00000468267 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms