RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 KRTAP10-8P60410 259 aa11.02□□□□□ -0.65
LINC01140-202ENST00000467438 DMBT1Q9UGM3 2413 aaPredicted RBP11.01□□□□□ -0.65
LINC01140-202ENST00000467438 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
LINC01140-202ENST00000467438 KRTAP17-1Q9BYP8 105 aa10.97□□□□□ -0.65
LINC01140-202ENST00000467438 Q5VSD8 79 aa10.96□□□□□ -0.66
LINC01140-202ENST00000467438 A0A0A0MQY5 61 aa10.95□□□□□ -0.66
LINC01140-202ENST00000467438 CRIPTQ9P021 101 aa10.95□□□□□ -0.66
LINC01140-202ENST00000467438 KRTAP10-6P60371 365 aaPredicted RBP10.93□□□□□ -0.66
LINC01140-202ENST00000467438 XP32Q5T750 250 aa10.93□□□□□ -0.66
LINC01140-202ENST00000467438 LPAP08519 4548 aa10.93□□□□□ -0.66
LINC01140-202ENST00000467438 RPL37P61927 97 aaKnown RBP10.92□□□□□ -0.66
LINC01140-202ENST00000467438 RYR3Q15413 4870 aa10.92□□□□□ -0.66
LINC01140-202ENST00000467438 KRTAP13-4Q3LI77 160 aa10.9□□□□□ -0.66
LINC01140-202ENST00000467438 RYR1P21817 5038 aa10.86□□□□□ -0.67
LINC01140-202ENST00000467438 KRTAP25-1Q3LHN0 102 aa10.85□□□□□ -0.67
LINC01140-202ENST00000467438 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
LINC01140-202ENST00000467438 A0A0D9SG42 100 aa10.84□□□□□ -0.67
LINC01140-202ENST00000467438 KIAA1109Q2LD37 5005 aa10.8□□□□□ -0.68
LINC01140-202ENST00000467438 S4R3F8 94 aa10.8□□□□□ -0.68
LINC01140-202ENST00000467438 K7ERS5 55 aa10.77□□□□□ -0.69
LINC01140-202ENST00000467438 P0C880 135 aa10.76□□□□□ -0.69
LINC01140-202ENST00000467438 LRP2P98164 4655 aa10.72□□□□□ -0.69
LINC01140-202ENST00000467438 ROMO1P60602 79 aa10.69□□□□□ -0.7
LINC01140-202ENST00000467438 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
LINC01140-202ENST00000467438 ABCA13Q86UQ4 5058 aa10.57□□□□□ -0.72
LINC01140-202ENST00000467438 EPPK1P58107 5090 aaKnown RBP10.54□□□□□ -0.72
LINC01140-202ENST00000467438 KRTAP12-2P59991 146 aa10.53□□□□□ -0.72
LINC01140-202ENST00000467438 TPRXLQ17RH7 258 aa10.5□□□□□ -0.73
LINC01140-202ENST00000467438 C10orf95Q9H7T3 257 aa10.49□□□□□ -0.73
LINC01140-202ENST00000467438 SPINT4Q6UDR6 99 aa10.42□□□□□ -0.74
LINC01140-202ENST00000467438 KRTAP12-1P59990 96 aa10.39□□□□□ -0.75
LINC01140-202ENST00000467438 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
LINC01140-202ENST00000467438 M0QZ58 72 aa10.18□□□□□ -0.78
LINC01140-202ENST00000467438 MUC17Q685J3 4493 aa10.18□□□□□ -0.78
LINC01140-202ENST00000467438 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
LINC01140-202ENST00000467438 KRTAP4-1Q9BYQ7 146 aa10.09□□□□□ -0.79
LINC01140-202ENST00000467438 R4GN34 69 aa10.04□□□□□ -0.8
LINC01140-202ENST00000467438 NDUFAF8A1L188 74 aa10.02□□□□□ -0.81
LINC01140-202ENST00000467438 MUC2Q02817 5179 aa9.98□□□□□ -0.81
LINC01140-202ENST00000467438 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
LINC01140-202ENST00000467438 KRTAP15-1Q3LI76 137 aa9.94□□□□□ -0.82
LINC01140-202ENST00000467438 HERC2O95714 4834 aa9.88□□□□□ -0.83
LINC01140-202ENST00000467438 KRTAP19-2Q3LHN2 52 aa9.83□□□□□ -0.84
LINC01140-202ENST00000467438 LUZP6Q538Z0 58 aa9.83□□□□□ -0.84
LINC01140-202ENST00000467438 J3QL48 77 aa9.81□□□□□ -0.84
LINC01140-202ENST00000467438 BIRC6Q9NR09 4857 aa9.77□□□□□ -0.85
LINC01140-202ENST00000467438 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
LINC01140-202ENST00000467438 FLGP20930 4061 aaPredicted RBP9.55□□□□□ -0.88
LINC01140-202ENST00000467438 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
LINC01140-202ENST00000467438 HERC1Q15751 4861 aa9.54□□□□□ -0.88
LINC01140-202ENST00000467438 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
LINC01140-202ENST00000467438 FAT4Q6V0I7 4981 aa9.46□□□□□ -0.9
LINC01140-202ENST00000467438 HMCN2Q8NDA2 5059 aa9.35□□□□□ -0.91
LINC01140-202ENST00000467438 PP632Q6XCG6 107 aa9.25□□□□□ -0.93
LINC01140-202ENST00000467438 LCE2CQ5TA81 110 aa9.22□□□□□ -0.93
LINC01140-202ENST00000467438 RNF213Q63HN8 5207 aa9.17□□□□□ -0.94
LINC01140-202ENST00000467438 TNP1P09430 55 aa9.14□□□□□ -0.95
LINC01140-202ENST00000467438 UBR4Q5T4S7 5183 aa9.06□□□□□ -0.96
LINC01140-202ENST00000467438 KRTAP19-1Q8IUB9 90 aa9.05□□□□□ -0.96
LINC01140-202ENST00000467438 M0R2T5 61 aa9.01□□□□□ -0.97
LINC01140-202ENST00000467438 SPRR2GQ9BYE4 73 aa9□□□□□ -0.97
LINC01140-202ENST00000467438 MT1HP80294 61 aa8.94□□□□□ -0.98
LINC01140-202ENST00000467438 MT1FP04733 61 aa8.87□□□□□ -0.99
LINC01140-202ENST00000467438 KRTAP23-1A1A580 65 aa8.87□□□□□ -0.99
LINC01140-202ENST00000467438 KRTAP10-10P60014 251 aa8.83□□□□□ -1
LINC01140-202ENST00000467438 MT2AP02795 61 aa8.83□□□□□ -1
LINC01140-202ENST00000467438 LCE3AQ5TA76 89 aa8.79□□□□□ -1
LINC01140-202ENST00000467438 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
LINC01140-202ENST00000467438 SPRR5A0A1B0GTR4 108 aa8.75□□□□□ -1.01
LINC01140-202ENST00000467438 MT1BP07438 61 aa8.57□□□□□ -1.04
LINC01140-202ENST00000467438 KRTAP19-8Q3LI54 63 aa8.56□□□□□ -1.04
LINC01140-202ENST00000467438 KRTAP10-5P60370 271 aa8.55□□□□□ -1.04
LINC01140-202ENST00000467438 MT1XP80297 61 aa8.53□□□□□ -1.04
LINC01140-202ENST00000467438 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
LINC01140-202ENST00000467438 KRTAP8-1Q8IUC2 63 aa8.43□□□□□ -1.06
LINC01140-202ENST00000467438 KRTAP10-7P60409 375 aaPredicted RBP8.37□□□□□ -1.07
LINC01140-202ENST00000467438 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
LINC01140-202ENST00000467438 KRTAP10-12P60413 245 aa8.34□□□□□ -1.07
LINC01140-202ENST00000467438 KRTAP12-3P60328 96 aa8.29□□□□□ -1.08
LINC01140-202ENST00000467438 USH2AO75445 5202 aa8.25□□□□□ -1.09
LINC01140-202ENST00000467438 KMT2DO14686 5537 aa8.17□□□□□ -1.1
LINC01140-202ENST00000467438 LCE2BO14633 110 aa8.09□□□□□ -1.11
LINC01140-202ENST00000467438 INE1O15225 51 aa8.06□□□□□ -1.12
LINC01140-202ENST00000467438 KRTAP19-5Q3LI72 72 aa7.99□□□□□ -1.13
LINC01140-202ENST00000467438 KRTAP4-8A0A0G2JLE6 195 aa7.91□□□□□ -1.14
LINC01140-202ENST00000467438 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
LINC01140-202ENST00000467438 LCE3CQ5T5A8 94 aa7.81□□□□□ -1.16
LINC01140-202ENST00000467438 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
LINC01140-202ENST00000467438 KRTAP9-6A8MVA2 160 aa7.68□□□□□ -1.18
LINC01140-202ENST00000467438 KRTAP4-7Q9BYR0 210 aa7.65□□□□□ -1.18
LINC01140-202ENST00000467438 KRTAP19-7Q3SYF9 63 aa7.6□□□□□ -1.19
LINC01140-202ENST00000467438 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
LINC01140-202ENST00000467438 SSPOA2VEC9 5147 aa7.45□□□□□ -1.22
LINC01140-202ENST00000467438 KRTAP9-2Q9BYQ4 174 aa7.4□□□□□ -1.22
LINC01140-202ENST00000467438 MT1LQ93083 61 aa7.36□□□□□ -1.23
LINC01140-202ENST00000467438 MT1EP04732 61 aa7.34□□□□□ -1.23
LINC01140-202ENST00000467438 KRTAP2-3P0C7H8 128 aa7.27□□□□□ -1.25
LINC01140-202ENST00000467438 KRTAP2-4Q9BYR9 128 aa7.27□□□□□ -1.25
LINC01140-202ENST00000467438 KRTAP2-1Q9BYU5 128 aa7.27□□□□□ -1.25
LINC01140-202ENST00000467438 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms