RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 H3BMG7 143 aa1□□□□□ -2.25
XRN1-206ENST00000467077 TRGC2P03986 189 aa1□□□□□ -2.25
XRN1-206ENST00000467077 IFITM1P13164 125 aa1□□□□□ -2.25
XRN1-206ENST00000467077 DSCR8Q96T75 97 aa1□□□□□ -2.25
XRN1-206ENST00000467077 A0A1B0GV72 72 aa0.99□□□□□ -2.25
XRN1-206ENST00000467077 FABP2P12104 132 aa0.99□□□□□ -2.25
XRN1-206ENST00000467077 RAB37Q96AX2 223 aa0.99□□□□□ -2.25
XRN1-206ENST00000467077 LINC00472Q9H8W2 130 aa0.99□□□□□ -2.25
XRN1-206ENST00000467077 IGKV3D-7A0A0C4DH55 119 aa0.98□□□□□ -2.25
XRN1-206ENST00000467077 TRBV7-4A0A0J9YYF1 115 aa0.98□□□□□ -2.25
XRN1-206ENST00000467077 A8MUN3 132 aa0.98□□□□□ -2.25
XRN1-206ENST00000467077 SNCGO76070 127 aa0.98□□□□□ -2.25
XRN1-206ENST00000467077 TMEM258P61165 79 aa0.98□□□□□ -2.25
XRN1-206ENST00000467077 KLKP1Q107X0 134 aa0.98□□□□□ -2.25
XRN1-206ENST00000467077 BVES-AS1Q5T3Y7 98 aa0.98□□□□□ -2.25
XRN1-206ENST00000467077 ANKRD29Q8N6D5 301 aa0.98□□□□□ -2.25
XRN1-206ENST00000467077 SYS1-DBNDD2H3BUS1 97 aa0.97□□□□□ -2.25
XRN1-206ENST00000467077 TRACP01848 142 aa0.97□□□□□ -2.25
XRN1-206ENST00000467077 CCKP06307 115 aa0.97□□□□□ -2.25
XRN1-206ENST00000467077 CLLU1Q5K131 121 aa0.97□□□□□ -2.25
XRN1-206ENST00000467077 CSAG1Q6PB30 78 aa0.97□□□□□ -2.25
XRN1-206ENST00000467077 LCA10Q71F78 164 aa0.97□□□□□ -2.25
XRN1-206ENST00000467077 COA5Q86WW8 74 aa0.97□□□□□ -2.25
XRN1-206ENST00000467077 S4R3F8 94 aa0.97□□□□□ -2.25
XRN1-206ENST00000467077 NDUFB1O75438 58 aa0.96□□□□□ -2.26
XRN1-206ENST00000467077 APOC3P02656 99 aa0.96□□□□□ -2.26
XRN1-206ENST00000467077 MT1XP80297 61 aa0.96□□□□□ -2.26
XRN1-206ENST00000467077 RBM3P98179 157 aaKnown RBP0.96□□□□□ -2.26
XRN1-206ENST00000467077 LINC01545Q5VT33 79 aa0.96□□□□□ -2.26
XRN1-206ENST00000467077 KTN1-AS1Q86SY8 53 aa0.96□□□□□ -2.26
XRN1-206ENST00000467077 PRR15Q8IV56 129 aa0.96□□□□□ -2.26
XRN1-206ENST00000467077 VPS25Q9BRG1 176 aa0.96□□□□□ -2.26
XRN1-206ENST00000467077 A0A1B0GW54 56 aa0.95□□□□□ -2.26
XRN1-206ENST00000467077 H0YGX0 51 aa0.95□□□□□ -2.26
XRN1-206ENST00000467077 J3KT08 172 aa0.95□□□□□ -2.26
XRN1-206ENST00000467077 KRTDAPP60985 99 aa0.95□□□□□ -2.26
XRN1-206ENST00000467077 C7orf65Q6ZTY9 151 aa0.95□□□□□ -2.26
XRN1-206ENST00000467077 ATOH7Q8N100 152 aa0.95□□□□□ -2.26
XRN1-206ENST00000467077 SVBPQ8N300 66 aa0.95□□□□□ -2.26
XRN1-206ENST00000467077 CRIPTQ9P021 101 aa0.95□□□□□ -2.26
XRN1-206ENST00000467077 TRAV7A0A075B6U4 112 aa0.94□□□□□ -2.26
XRN1-206ENST00000467077 H3BT86 120 aa0.94□□□□□ -2.26
XRN1-206ENST00000467077 MT4P47944 62 aa0.94□□□□□ -2.26
XRN1-206ENST00000467077 NDUFA5Q16718 116 aa0.94□□□□□ -2.26
XRN1-206ENST00000467077 PLAC4Q8WY50 150 aa0.94□□□□□ -2.26
XRN1-206ENST00000467077 TMEM256-PLSCR3K7ERE1 68 aa0.93□□□□□ -2.26
XRN1-206ENST00000467077 DNAL4O96015 105 aa0.93□□□□□ -2.26
XRN1-206ENST00000467077 PDE6GP18545 87 aa0.93□□□□□ -2.26
XRN1-206ENST00000467077 BATFQ16520 125 aa0.93□□□□□ -2.26
XRN1-206ENST00000467077 MRPL34Q9BQ48 92 aaKnown RBP0.93□□□□□ -2.26
XRN1-206ENST00000467077 NAA38Q9BRA0 125 aaKnown RBP0.93□□□□□ -2.26
XRN1-206ENST00000467077 ORMDL1Q9P0S3 153 aa0.93□□□□□ -2.26
XRN1-206ENST00000467077 A0A1B0GX51 115 aa0.92□□□□□ -2.26
XRN1-206ENST00000467077 hDV103S1A0JD37 113 aa0.92□□□□□ -2.26
XRN1-206ENST00000467077 K7EQZ3 153 aa0.92□□□□□ -2.26
XRN1-206ENST00000467077 Q6ZQT0 140 aa0.92□□□□□ -2.26
XRN1-206ENST00000467077 TMEM254Q8TBM7 123 aa0.92□□□□□ -2.26
XRN1-206ENST00000467077 MMP24-AS1A0A0U1RRL7 71 aa0.91□□□□□ -2.26
XRN1-206ENST00000467077 C9JAW5 83 aa0.91□□□□□ -2.26
XRN1-206ENST00000467077 HIST1H4AP62805 103 aaKnown RBP0.91□□□□□ -2.26
XRN1-206ENST00000467077 HIST1H2BKO60814 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BJP06899 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BOP23527 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BBP33778 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BDP58876 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BCP62807 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST2H2BEQ16778 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BHQ93079 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BNQ99877 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BMQ99879 126 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 PRO1854Q9UHT4 67 aa0.9□□□□□ -2.27
XRN1-206ENST00000467077 A0A087WVE0 104 aa0.89□□□□□ -2.27
XRN1-206ENST00000467077 HCG22E2RYF7 251 aa0.89□□□□□ -2.27
XRN1-206ENST00000467077 NDUFC1O43677 76 aa0.88□□□□□ -2.27
XRN1-206ENST00000467077 COX6CP09669 75 aa0.88□□□□□ -2.27
XRN1-206ENST00000467077 NREPQ16612 68 aa0.88□□□□□ -2.27
XRN1-206ENST00000467077 Q1T7F1 81 aa0.88□□□□□ -2.27
XRN1-206ENST00000467077 LINC01554Q52M75 96 aa0.88□□□□□ -2.27
XRN1-206ENST00000467077 CASC2Q6XLA1 102 aa0.88□□□□□ -2.27
XRN1-206ENST00000467077 CYSTM1Q9H1C7 97 aa0.88□□□□□ -2.27
XRN1-206ENST00000467077 H0YAA0 97 aa0.87□□□□□ -2.27
XRN1-206ENST00000467077 M0QZ58 72 aa0.87□□□□□ -2.27
XRN1-206ENST00000467077 BAALC-AS2P0C853 105 aa0.87□□□□□ -2.27
XRN1-206ENST00000467077 COX8AP10176 69 aa0.87□□□□□ -2.27
XRN1-206ENST00000467077 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
XRN1-206ENST00000467077 HIST3H2BBQ8N257 126 aa0.87□□□□□ -2.27
XRN1-206ENST00000467077 C14orf144Q96I85 54 aa0.87□□□□□ -2.27
XRN1-206ENST00000467077 LOC110117498A0A087WWA1 95 aa0.86□□□□□ -2.27
XRN1-206ENST00000467077 JMJD7-PLA2G4BH0Y9G9 81 aa0.86□□□□□ -2.27
XRN1-206ENST00000467077 K7ERJ3 54 aa0.86□□□□□ -2.27
XRN1-206ENST00000467077 PMAIP1Q13794 54 aa0.86□□□□□ -2.27
XRN1-206ENST00000467077 C14orf132Q9NPU4 83 aa0.86□□□□□ -2.27
XRN1-206ENST00000467077 DLEU1O43261 78 aa0.85□□□□□ -2.27
XRN1-206ENST00000467077 MT1EP04732 61 aa0.85□□□□□ -2.27
XRN1-206ENST00000467077 FXYD2P54710 66 aa0.85□□□□□ -2.27
XRN1-206ENST00000467077 KRTAP19-7Q3SYF9 63 aa0.85□□□□□ -2.27
XRN1-206ENST00000467077 HIST1H2BLQ99880 126 aa0.85□□□□□ -2.27
XRN1-206ENST00000467077 HIGD1BQ9P298 99 aa0.85□□□□□ -2.27
XRN1-206ENST00000467077 K7EP34 96 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms