RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
NUP188-204ENST00000467044 LCA10Q71F78 164 aa5.23□□□□□ -1.57
NUP188-204ENST00000467044 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
NUP188-204ENST00000467044 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
NUP188-204ENST00000467044 KRTAP3-3Q9BYR6 98 aa5.17□□□□□ -1.58
NUP188-204ENST00000467044 TMEM258P61165 79 aa5.16□□□□□ -1.58
NUP188-204ENST00000467044 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.59
NUP188-204ENST00000467044 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.59
NUP188-204ENST00000467044 COA5Q86WW8 74 aa5.14□□□□□ -1.59
NUP188-204ENST00000467044 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
NUP188-204ENST00000467044 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
NUP188-204ENST00000467044 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
NUP188-204ENST00000467044 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
NUP188-204ENST00000467044 MT2AP02795 61 aa5.04□□□□□ -1.6
NUP188-204ENST00000467044 KRTAP10-10P60014 251 aa5.03□□□□□ -1.6
NUP188-204ENST00000467044 ADM2Q7Z4H4 148 aa5.01□□□□□ -1.61
NUP188-204ENST00000467044 SERP1Q9Y6X1 66 aa5.01□□□□□ -1.61
NUP188-204ENST00000467044 MT1FP04733 61 aa5□□□□□ -1.61
NUP188-204ENST00000467044 H0YAA0 97 aa4.99□□□□□ -1.61
NUP188-204ENST00000467044 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
NUP188-204ENST00000467044 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
NUP188-204ENST00000467044 P0C880 135 aa4.93□□□□□ -1.62
NUP188-204ENST00000467044 SEC61GP60059 68 aa4.93□□□□□ -1.62
NUP188-204ENST00000467044 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
NUP188-204ENST00000467044 A0A1B0GU69 56 aa4.88□□□□□ -1.63
NUP188-204ENST00000467044 CRIPTQ9P021 101 aa4.88□□□□□ -1.63
NUP188-204ENST00000467044 RPS28P62857 69 aaKnown RBP4.87□□□□□ -1.63
NUP188-204ENST00000467044 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
NUP188-204ENST00000467044 SMIM26A0A096LP01 95 aa4.85□□□□□ -1.63
NUP188-204ENST00000467044 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
NUP188-204ENST00000467044 R4GN34 69 aa4.85□□□□□ -1.63
NUP188-204ENST00000467044 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
NUP188-204ENST00000467044 M0QZ58 72 aa4.83□□□□□ -1.64
NUP188-204ENST00000467044 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
NUP188-204ENST00000467044 SPRR2GQ9BYE4 73 aa4.81□□□□□ -1.64
NUP188-204ENST00000467044 V9GYY9 64 aa4.81□□□□□ -1.64
NUP188-204ENST00000467044 A0A1B0GU33 70 aa4.8□□□□□ -1.64
NUP188-204ENST00000467044 LCE2BO14633 110 aa4.8□□□□□ -1.64
NUP188-204ENST00000467044 Q1T7F1 81 aa4.79□□□□□ -1.64
NUP188-204ENST00000467044 LINC01554Q52M75 96 aa4.77□□□□□ -1.65
NUP188-204ENST00000467044 PSPHP1O15172 72 aa4.75□□□□□ -1.65
NUP188-204ENST00000467044 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
NUP188-204ENST00000467044 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
NUP188-204ENST00000467044 Q5VV11 94 aa4.73□□□□□ -1.65
NUP188-204ENST00000467044 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
NUP188-204ENST00000467044 A0A0D9SG42 100 aa4.69□□□□□ -1.66
NUP188-204ENST00000467044 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
NUP188-204ENST00000467044 UQCR11O14957 56 aa4.68□□□□□ -1.66
NUP188-204ENST00000467044 MT1BP07438 61 aa4.68□□□□□ -1.66
NUP188-204ENST00000467044 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
NUP188-204ENST00000467044 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
NUP188-204ENST00000467044 USH2AO75445 5202 aa4.65□□□□□ -1.67
NUP188-204ENST00000467044 A8MU10 97 aa4.63□□□□□ -1.67
NUP188-204ENST00000467044 A6NED7 52 aa4.62□□□□□ -1.67
NUP188-204ENST00000467044 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
NUP188-204ENST00000467044 A6NN06 94 aa4.61□□□□□ -1.67
NUP188-204ENST00000467044 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
NUP188-204ENST00000467044 KRTAP12-1P59990 96 aa4.56□□□□□ -1.68
NUP188-204ENST00000467044 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
NUP188-204ENST00000467044 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
NUP188-204ENST00000467044 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
NUP188-204ENST00000467044 SSPOA2VEC9 5147 aa4.53□□□□□ -1.69
NUP188-204ENST00000467044 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
NUP188-204ENST00000467044 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
NUP188-204ENST00000467044 MT1XP80297 61 aa4.48□□□□□ -1.69
NUP188-204ENST00000467044 K7ERS5 55 aa4.47□□□□□ -1.69
NUP188-204ENST00000467044 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
NUP188-204ENST00000467044 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
NUP188-204ENST00000467044 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
NUP188-204ENST00000467044 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
NUP188-204ENST00000467044 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
NUP188-204ENST00000467044 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
NUP188-204ENST00000467044 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
NUP188-204ENST00000467044 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
NUP188-204ENST00000467044 TNP1P09430 55 aa4.26□□□□□ -1.73
NUP188-204ENST00000467044 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
NUP188-204ENST00000467044 ROMO1P60602 79 aa4.22□□□□□ -1.73
NUP188-204ENST00000467044 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
NUP188-204ENST00000467044 KRTAP4-8A0A0G2JLE6 195 aa4.19□□□□□ -1.74
NUP188-204ENST00000467044 KRTAP4-8Q9BYQ9 185 aa4.19□□□□□ -1.74
NUP188-204ENST00000467044 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
NUP188-204ENST00000467044 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
NUP188-204ENST00000467044 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
NUP188-204ENST00000467044 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.75
NUP188-204ENST00000467044 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
NUP188-204ENST00000467044 KMT2DO14686 5537 aa4.11□□□□□ -1.75
NUP188-204ENST00000467044 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
NUP188-204ENST00000467044 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
NUP188-204ENST00000467044 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
NUP188-204ENST00000467044 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
NUP188-204ENST00000467044 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
NUP188-204ENST00000467044 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
NUP188-204ENST00000467044 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
NUP188-204ENST00000467044 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
NUP188-204ENST00000467044 NEBP20929 6669 aa3.96□□□□□ -1.78
NUP188-204ENST00000467044 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
NUP188-204ENST00000467044 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
NUP188-204ENST00000467044 MT1EP04732 61 aa3.94□□□□□ -1.78
NUP188-204ENST00000467044 SPRR2EP22531 72 aa3.91□□□□□ -1.78
NUP188-204ENST00000467044 SPRR2BP35325 72 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms