RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ROMO1P60602 79 aa6.71□□□□□ -1.33
PDZRN3-205ENST00000466780 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
PDZRN3-205ENST00000466780 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
PDZRN3-205ENST00000466780 DMBT1Q9UGM3 2413 aaPredicted RBP6.68□□□□□ -1.34
PDZRN3-205ENST00000466780 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
PDZRN3-205ENST00000466780 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
PDZRN3-205ENST00000466780 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.34
PDZRN3-205ENST00000466780 HSPG2P98160 4391 aa6.65□□□□□ -1.34
PDZRN3-205ENST00000466780 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
PDZRN3-205ENST00000466780 A0A0D9SG42 100 aa6.63□□□□□ -1.35
PDZRN3-205ENST00000466780 TNXBP22105 4242 aa6.62□□□□□ -1.35
PDZRN3-205ENST00000466780 Q5VSD8 79 aa6.62□□□□□ -1.35
PDZRN3-205ENST00000466780 S4R3F8 94 aa6.57□□□□□ -1.36
PDZRN3-205ENST00000466780 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
PDZRN3-205ENST00000466780 P0C880 135 aa6.56□□□□□ -1.36
PDZRN3-205ENST00000466780 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
PDZRN3-205ENST00000466780 XP32Q5T750 250 aa6.55□□□□□ -1.36
PDZRN3-205ENST00000466780 RYR3Q15413 4870 aa6.52□□□□□ -1.37
PDZRN3-205ENST00000466780 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
PDZRN3-205ENST00000466780 RYR1P21817 5038 aa6.49□□□□□ -1.37
PDZRN3-205ENST00000466780 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
PDZRN3-205ENST00000466780 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
PDZRN3-205ENST00000466780 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.38
PDZRN3-205ENST00000466780 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
PDZRN3-205ENST00000466780 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
PDZRN3-205ENST00000466780 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
PDZRN3-205ENST00000466780 LPAP08519 4548 aa6.37□□□□□ -1.39
PDZRN3-205ENST00000466780 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.4
PDZRN3-205ENST00000466780 LRP2P98164 4655 aa6.31□□□□□ -1.4
PDZRN3-205ENST00000466780 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
PDZRN3-205ENST00000466780 M0QZ58 72 aa6.29□□□□□ -1.4
PDZRN3-205ENST00000466780 NDUFAF8A1L188 74 aa6.23□□□□□ -1.41
PDZRN3-205ENST00000466780 ABCA13Q86UQ4 5058 aa6.2□□□□□ -1.42
PDZRN3-205ENST00000466780 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
PDZRN3-205ENST00000466780 R4GN34 69 aa6.11□□□□□ -1.43
PDZRN3-205ENST00000466780 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
PDZRN3-205ENST00000466780 J3QL48 77 aa6.04□□□□□ -1.44
PDZRN3-205ENST00000466780 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
PDZRN3-205ENST00000466780 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
PDZRN3-205ENST00000466780 KRTAP4-1Q9BYQ7 146 aa5.97□□□□□ -1.45
PDZRN3-205ENST00000466780 HERC2O95714 4834 aa5.96□□□□□ -1.45
PDZRN3-205ENST00000466780 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
PDZRN3-205ENST00000466780 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
PDZRN3-205ENST00000466780 MUC2Q02817 5179 aa5.83□□□□□ -1.48
PDZRN3-205ENST00000466780 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
PDZRN3-205ENST00000466780 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
PDZRN3-205ENST00000466780 BIRC6Q9NR09 4857 aa5.74□□□□□ -1.49
PDZRN3-205ENST00000466780 FLGP20930 4061 aaPredicted RBP5.71□□□□□ -1.5
PDZRN3-205ENST00000466780 HERC1Q15751 4861 aa5.7□□□□□ -1.5
PDZRN3-205ENST00000466780 LUZP6Q538Z0 58 aa5.67□□□□□ -1.5
PDZRN3-205ENST00000466780 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
PDZRN3-205ENST00000466780 TNP1P09430 55 aa5.62□□□□□ -1.51
PDZRN3-205ENST00000466780 HMCN2Q8NDA2 5059 aa5.6□□□□□ -1.51
PDZRN3-205ENST00000466780 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
PDZRN3-205ENST00000466780 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
PDZRN3-205ENST00000466780 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
PDZRN3-205ENST00000466780 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
PDZRN3-205ENST00000466780 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
PDZRN3-205ENST00000466780 M0R2T5 61 aa5.46□□□□□ -1.53
PDZRN3-205ENST00000466780 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
PDZRN3-205ENST00000466780 SPRR2GQ9BYE4 73 aa5.44□□□□□ -1.54
PDZRN3-205ENST00000466780 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
PDZRN3-205ENST00000466780 UBR4Q5T4S7 5183 aa5.42□□□□□ -1.54
PDZRN3-205ENST00000466780 MT1HP80294 61 aa5.35□□□□□ -1.55
PDZRN3-205ENST00000466780 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
PDZRN3-205ENST00000466780 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
PDZRN3-205ENST00000466780 MT1FP04733 61 aa5.26□□□□□ -1.57
PDZRN3-205ENST00000466780 MT2AP02795 61 aa5.25□□□□□ -1.57
PDZRN3-205ENST00000466780 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
PDZRN3-205ENST00000466780 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
PDZRN3-205ENST00000466780 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
PDZRN3-205ENST00000466780 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
PDZRN3-205ENST00000466780 MT1BP07438 61 aa5.13□□□□□ -1.59
PDZRN3-205ENST00000466780 MT1XP80297 61 aa5.13□□□□□ -1.59
PDZRN3-205ENST00000466780 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
PDZRN3-205ENST00000466780 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
PDZRN3-205ENST00000466780 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
PDZRN3-205ENST00000466780 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
PDZRN3-205ENST00000466780 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
PDZRN3-205ENST00000466780 INE1O15225 51 aa4.95□□□□□ -1.62
PDZRN3-205ENST00000466780 USH2AO75445 5202 aa4.84□□□□□ -1.63
PDZRN3-205ENST00000466780 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
PDZRN3-205ENST00000466780 LCE2BO14633 110 aa4.81□□□□□ -1.64
PDZRN3-205ENST00000466780 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
PDZRN3-205ENST00000466780 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
PDZRN3-205ENST00000466780 KMT2DO14686 5537 aa4.72□□□□□ -1.65
PDZRN3-205ENST00000466780 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
PDZRN3-205ENST00000466780 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
PDZRN3-205ENST00000466780 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
PDZRN3-205ENST00000466780 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.67
PDZRN3-205ENST00000466780 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
PDZRN3-205ENST00000466780 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
PDZRN3-205ENST00000466780 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
PDZRN3-205ENST00000466780 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
PDZRN3-205ENST00000466780 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
PDZRN3-205ENST00000466780 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
PDZRN3-205ENST00000466780 MT1LQ93083 61 aa4.44□□□□□ -1.7
PDZRN3-205ENST00000466780 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
PDZRN3-205ENST00000466780 MT1EP04732 61 aa4.41□□□□□ -1.7
PDZRN3-205ENST00000466780 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms