RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
AGRN-204ENST00000466223 LCA10Q71F78 164 aa7.59□□□□□ -1.19
AGRN-204ENST00000466223 MT1FP04733 61 aa7.55□□□□□ -1.2
AGRN-204ENST00000466223 SERP2Q8N6R1 65 aa7.52□□□□□ -1.21
AGRN-204ENST00000466223 NDUFC1O43677 76 aa7.5□□□□□ -1.21
AGRN-204ENST00000466223 SNURFQ9Y675 71 aa7.46□□□□□ -1.22
AGRN-204ENST00000466223 C20orf197Q8N268 126 aa7.45□□□□□ -1.22
AGRN-204ENST00000466223 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
AGRN-204ENST00000466223 KRTAP9-3Q9BYQ3 159 aa7.43□□□□□ -1.22
AGRN-204ENST00000466223 ACYP2P14621 99 aa7.4□□□□□ -1.22
AGRN-204ENST00000466223 COX7CP15954 63 aa7.37□□□□□ -1.23
AGRN-204ENST00000466223 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
AGRN-204ENST00000466223 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
AGRN-204ENST00000466223 SPANXA2-OT1Q8N9U9 137 aa7.33□□□□□ -1.24
AGRN-204ENST00000466223 LCE2BO14633 110 aa7.32□□□□□ -1.24
AGRN-204ENST00000466223 USH2AO75445 5202 aa7.3□□□□□ -1.24
AGRN-204ENST00000466223 H0YAA0 97 aa7.3□□□□□ -1.24
AGRN-204ENST00000466223 ANAPC13Q9BS18 74 aa7.3□□□□□ -1.24
AGRN-204ENST00000466223 CHKB-CPT1BH3BT56 60 aa7.28□□□□□ -1.24
AGRN-204ENST00000466223 SPTSSBQ8NFR3 76 aa7.28□□□□□ -1.24
AGRN-204ENST00000466223 SSPOA2VEC9 5147 aa7.27□□□□□ -1.25
AGRN-204ENST00000466223 ADM2Q7Z4H4 148 aa7.25□□□□□ -1.25
AGRN-204ENST00000466223 CRIPTQ9P021 101 aa7.25□□□□□ -1.25
AGRN-204ENST00000466223 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
AGRN-204ENST00000466223 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
AGRN-204ENST00000466223 H7BZZ5 65 aa7.16□□□□□ -1.26
AGRN-204ENST00000466223 FCGBPQ9Y6R7 5405 aaPredicted RBP7.15□□□□□ -1.26
AGRN-204ENST00000466223 CYSTM1Q9H1C7 97 aa7.13□□□□□ -1.27
AGRN-204ENST00000466223 Q5VV11 94 aa7.11□□□□□ -1.27
AGRN-204ENST00000466223 COA5Q86WW8 74 aa7.11□□□□□ -1.27
AGRN-204ENST00000466223 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
AGRN-204ENST00000466223 P0C880 135 aa7.08□□□□□ -1.28
AGRN-204ENST00000466223 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
AGRN-204ENST00000466223 R4GN34 69 aa7.07□□□□□ -1.28
AGRN-204ENST00000466223 KRTAP19-6Q3LI70 58 aa7.04□□□□□ -1.28
AGRN-204ENST00000466223 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.28
AGRN-204ENST00000466223 M0QZ58 72 aa7.01□□□□□ -1.29
AGRN-204ENST00000466223 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
AGRN-204ENST00000466223 MT1BP07438 61 aa7□□□□□ -1.29
AGRN-204ENST00000466223 ATP5EP56381 51 aaPredicted RBP6.98□□□□□ -1.29
AGRN-204ENST00000466223 SEC61GP60059 68 aa6.96□□□□□ -1.3
AGRN-204ENST00000466223 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
AGRN-204ENST00000466223 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
AGRN-204ENST00000466223 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
AGRN-204ENST00000466223 A6NN06 94 aa6.89□□□□□ -1.31
AGRN-204ENST00000466223 TMEM258P61165 79 aa6.89□□□□□ -1.31
AGRN-204ENST00000466223 PCP4P48539 62 aa6.86□□□□□ -1.31
AGRN-204ENST00000466223 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
AGRN-204ENST00000466223 SVIPQ8NHG7 77 aa6.81□□□□□ -1.32
AGRN-204ENST00000466223 A0A1B0GU69 56 aa6.78□□□□□ -1.32
AGRN-204ENST00000466223 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
AGRN-204ENST00000466223 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
AGRN-204ENST00000466223 A0A1B0GU33 70 aa6.75□□□□□ -1.33
AGRN-204ENST00000466223 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
AGRN-204ENST00000466223 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
AGRN-204ENST00000466223 MT1XP80297 61 aa6.65□□□□□ -1.34
AGRN-204ENST00000466223 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.34
AGRN-204ENST00000466223 LINC01558Q9Y6Z2 57 aa6.64□□□□□ -1.35
AGRN-204ENST00000466223 A0A0D9SG42 100 aa6.62□□□□□ -1.35
AGRN-204ENST00000466223 NEBP20929 6669 aa6.58□□□□□ -1.36
AGRN-204ENST00000466223 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
AGRN-204ENST00000466223 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
AGRN-204ENST00000466223 SPINT4Q6UDR6 99 aa6.53□□□□□ -1.36
AGRN-204ENST00000466223 V9GYY9 64 aa6.51□□□□□ -1.37
AGRN-204ENST00000466223 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
AGRN-204ENST00000466223 UQCR11O14957 56 aa6.46□□□□□ -1.38
AGRN-204ENST00000466223 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
AGRN-204ENST00000466223 A8MU10 97 aa6.45□□□□□ -1.38
AGRN-204ENST00000466223 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
AGRN-204ENST00000466223 KRTAP20-1Q3LI63 56 aa6.43□□□□□ -1.38
AGRN-204ENST00000466223 Q1T7F1 81 aa6.42□□□□□ -1.38
AGRN-204ENST00000466223 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
AGRN-204ENST00000466223 PSPHP1O15172 72 aa6.37□□□□□ -1.39
AGRN-204ENST00000466223 KMT2DO14686 5537 aa6.37□□□□□ -1.39
AGRN-204ENST00000466223 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
AGRN-204ENST00000466223 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
AGRN-204ENST00000466223 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
AGRN-204ENST00000466223 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
AGRN-204ENST00000466223 KRTAP5-9P26371 169 aa6.3□□□□□ -1.4
AGRN-204ENST00000466223 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
AGRN-204ENST00000466223 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
AGRN-204ENST00000466223 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
AGRN-204ENST00000466223 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
AGRN-204ENST00000466223 K7ERS5 55 aa6.22□□□□□ -1.41
AGRN-204ENST00000466223 A6NED7 52 aa6.21□□□□□ -1.42
AGRN-204ENST00000466223 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
AGRN-204ENST00000466223 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
AGRN-204ENST00000466223 TNP1P09430 55 aa6.13□□□□□ -1.43
AGRN-204ENST00000466223 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
AGRN-204ENST00000466223 SPRR2EP22531 72 aa6.07□□□□□ -1.44
AGRN-204ENST00000466223 SPRR2BP35325 72 aa6.07□□□□□ -1.44
AGRN-204ENST00000466223 SPRR2AP35326 72 aa6.07□□□□□ -1.44
AGRN-204ENST00000466223 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
AGRN-204ENST00000466223 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.46
AGRN-204ENST00000466223 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
AGRN-204ENST00000466223 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.46
AGRN-204ENST00000466223 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
AGRN-204ENST00000466223 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
AGRN-204ENST00000466223 LCE3AQ5TA76 89 aa5.92□□□□□ -1.46
AGRN-204ENST00000466223 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms