RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CSAG1Q6PB30 78 aa5.82□□□□□ -1.48
CHPF2-202ENST00000465601 USH2AO75445 5202 aa5.81□□□□□ -1.48
CHPF2-202ENST00000465601 KRTAP3-3Q9BYR6 98 aa5.79□□□□□ -1.48
CHPF2-202ENST00000465601 LCE2BO14633 110 aa5.78□□□□□ -1.48
CHPF2-202ENST00000465601 TRAV7A0A075B6U4 112 aa5.77□□□□□ -1.49
CHPF2-202ENST00000465601 SMIM20Q8N5G0 67 aa5.76□□□□□ -1.49
CHPF2-202ENST00000465601 A8MUN3 132 aa5.75□□□□□ -1.49
CHPF2-202ENST00000465601 H3BS24 57 aa5.75□□□□□ -1.49
CHPF2-202ENST00000465601 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
CHPF2-202ENST00000465601 NDUFC1O43677 76 aa5.71□□□□□ -1.5
CHPF2-202ENST00000465601 DMAC1Q96GE9 116 aa5.67□□□□□ -1.5
CHPF2-202ENST00000465601 SNURFQ9Y675 71 aa5.66□□□□□ -1.5
CHPF2-202ENST00000465601 SERP2Q8N6R1 65 aa5.64□□□□□ -1.51
CHPF2-202ENST00000465601 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
CHPF2-202ENST00000465601 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
CHPF2-202ENST00000465601 SEC61GP60059 68 aa5.6□□□□□ -1.51
CHPF2-202ENST00000465601 H0YAA0 97 aa5.58□□□□□ -1.52
CHPF2-202ENST00000465601 ACYP2P14621 99 aa5.58□□□□□ -1.52
CHPF2-202ENST00000465601 ADM2Q7Z4H4 148 aa5.57□□□□□ -1.52
CHPF2-202ENST00000465601 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
CHPF2-202ENST00000465601 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
CHPF2-202ENST00000465601 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
CHPF2-202ENST00000465601 COX7CP15954 63 aa5.52□□□□□ -1.53
CHPF2-202ENST00000465601 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
CHPF2-202ENST00000465601 SPANXA2-OT1Q8N9U9 137 aa5.51□□□□□ -1.53
CHPF2-202ENST00000465601 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
CHPF2-202ENST00000465601 MT1BP07438 61 aa5.49□□□□□ -1.53
CHPF2-202ENST00000465601 Q5VV11 94 aa5.49□□□□□ -1.53
CHPF2-202ENST00000465601 CHKB-CPT1BH3BT56 60 aa5.48□□□□□ -1.53
CHPF2-202ENST00000465601 P0C880 135 aa5.47□□□□□ -1.53
CHPF2-202ENST00000465601 SPTSSBQ8NFR3 76 aa5.46□□□□□ -1.54
CHPF2-202ENST00000465601 KRTAP3-2Q9BYR7 98 aa5.46□□□□□ -1.54
CHPF2-202ENST00000465601 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
CHPF2-202ENST00000465601 ANAPC13Q9BS18 74 aa5.43□□□□□ -1.54
CHPF2-202ENST00000465601 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
CHPF2-202ENST00000465601 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
CHPF2-202ENST00000465601 H7BZZ5 65 aa5.39□□□□□ -1.55
CHPF2-202ENST00000465601 R4GN34 69 aa5.39□□□□□ -1.55
CHPF2-202ENST00000465601 M0QZ58 72 aa5.37□□□□□ -1.55
CHPF2-202ENST00000465601 COA5Q86WW8 74 aa5.37□□□□□ -1.55
CHPF2-202ENST00000465601 A6NN06 94 aa5.35□□□□□ -1.55
CHPF2-202ENST00000465601 MACF1Q9UPN3 7388 aaKnown RBP5.33□□□□□ -1.56
CHPF2-202ENST00000465601 CCDC179H3BU77 68 aa5.33□□□□□ -1.56
CHPF2-202ENST00000465601 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
CHPF2-202ENST00000465601 V9GYY9 64 aa5.32□□□□□ -1.56
CHPF2-202ENST00000465601 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
CHPF2-202ENST00000465601 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
CHPF2-202ENST00000465601 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
CHPF2-202ENST00000465601 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
CHPF2-202ENST00000465601 MT1XP80297 61 aa5.19□□□□□ -1.58
CHPF2-202ENST00000465601 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
CHPF2-202ENST00000465601 SERP1Q9Y6X1 66 aa5.19□□□□□ -1.58
CHPF2-202ENST00000465601 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
CHPF2-202ENST00000465601 ATP5EP56381 51 aaPredicted RBP5.16□□□□□ -1.58
CHPF2-202ENST00000465601 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
CHPF2-202ENST00000465601 A0A1B0GU33 70 aa5.11□□□□□ -1.59
CHPF2-202ENST00000465601 TMEM258P61165 79 aa5.1□□□□□ -1.59
CHPF2-202ENST00000465601 A0A1B0GU69 56 aa5.09□□□□□ -1.59
CHPF2-202ENST00000465601 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
CHPF2-202ENST00000465601 A0A0D9SG42 100 aa5.06□□□□□ -1.6
CHPF2-202ENST00000465601 KMT2DO14686 5537 aa5.04□□□□□ -1.6
CHPF2-202ENST00000465601 KRTAP12-2P59991 146 aa5.01□□□□□ -1.61
CHPF2-202ENST00000465601 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
CHPF2-202ENST00000465601 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
CHPF2-202ENST00000465601 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
CHPF2-202ENST00000465601 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
CHPF2-202ENST00000465601 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
CHPF2-202ENST00000465601 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
CHPF2-202ENST00000465601 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.61
CHPF2-202ENST00000465601 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
CHPF2-202ENST00000465601 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
CHPF2-202ENST00000465601 A8MU10 97 aa4.94□□□□□ -1.62
CHPF2-202ENST00000465601 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
CHPF2-202ENST00000465601 NEBP20929 6669 aa4.93□□□□□ -1.62
CHPF2-202ENST00000465601 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
CHPF2-202ENST00000465601 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
CHPF2-202ENST00000465601 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
CHPF2-202ENST00000465601 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
CHPF2-202ENST00000465601 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
CHPF2-202ENST00000465601 SPRR2FQ96RM1 72 aa4.88□□□□□ -1.63
CHPF2-202ENST00000465601 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
CHPF2-202ENST00000465601 UQCR11O14957 56 aa4.82□□□□□ -1.64
CHPF2-202ENST00000465601 PSPHP1O15172 72 aa4.78□□□□□ -1.64
CHPF2-202ENST00000465601 Q1T7F1 81 aa4.78□□□□□ -1.64
CHPF2-202ENST00000465601 SPRR2EP22531 72 aa4.76□□□□□ -1.65
CHPF2-202ENST00000465601 SPRR2BP35325 72 aa4.76□□□□□ -1.65
CHPF2-202ENST00000465601 SPRR2AP35326 72 aa4.76□□□□□ -1.65
CHPF2-202ENST00000465601 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
CHPF2-202ENST00000465601 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
CHPF2-202ENST00000465601 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
CHPF2-202ENST00000465601 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
CHPF2-202ENST00000465601 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
CHPF2-202ENST00000465601 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
CHPF2-202ENST00000465601 TNP1P09430 55 aa4.65□□□□□ -1.67
CHPF2-202ENST00000465601 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
CHPF2-202ENST00000465601 A6NED7 52 aa4.61□□□□□ -1.67
CHPF2-202ENST00000465601 K7ERS5 55 aa4.6□□□□□ -1.67
CHPF2-202ENST00000465601 SPRR2DP22532 72 aa4.6□□□□□ -1.67
CHPF2-202ENST00000465601 MT1EP04732 61 aa4.59□□□□□ -1.67
CHPF2-202ENST00000465601 KRTAP2-3P0C7H8 128 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms