RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 RICTORQ6R327 1708 aa-1.62□□□□□ -2.67
SMC4-205ENST00000465563 DNMBPQ6XZF7 1577 aa-1.62□□□□□ -2.67
SMC4-205ENST00000465563 PCNTO95613 3336 aa-1.62□□□□□ -2.67
SMC4-205ENST00000465563 A0A1B0GUL6 1792 aa-1.62□□□□□ -2.67
SMC4-205ENST00000465563 CD163L1Q9NR16 1453 aa-1.63□□□□□ -2.67
SMC4-205ENST00000465563 THOC2Q8NI27 1593 aaKnown RBP-1.63□□□□□ -2.67
SMC4-205ENST00000465563 HMGA1P17096 107 aaKnown RBP-1.63□□□□□ -2.67
SMC4-205ENST00000465563 KCNQ1DNQ9H478 68 aa-1.63□□□□□ -2.67
SMC4-205ENST00000465563 ABRACLQ9P1F3 81 aa-1.63□□□□□ -2.67
SMC4-205ENST00000465563 SZT2Q5T011 3432 aa-1.64□□□□□ -2.67
SMC4-205ENST00000465563 MED14O60244 1454 aa-1.64□□□□□ -2.67
SMC4-205ENST00000465563 HFM1A2PYH4 1435 aa-1.65□□□□□ -2.67
SMC4-205ENST00000465563 LRRIQ1Q96JM4 1722 aa-1.65□□□□□ -2.67
SMC4-205ENST00000465563 A0A087WXM4 84 aa-1.65□□□□□ -2.67
SMC4-205ENST00000465563 ETDCA0A1B0GVM5 59 aa-1.65□□□□□ -2.67
SMC4-205ENST00000465563 KANTRA0A1W2PQU2 76 aa-1.65□□□□□ -2.67
SMC4-205ENST00000465563 KAAG1Q9UBP8 84 aa-1.65□□□□□ -2.67
SMC4-205ENST00000465563 ARHGAP35Q9NRY4 1499 aa-1.65□□□□□ -2.67
SMC4-205ENST00000465563 DEFB121Q5J5C9 76 aa-1.66□□□□□ -2.68
SMC4-205ENST00000465563 UACAQ9BZF9 1416 aa-1.66□□□□□ -2.68
SMC4-205ENST00000465563 RNF17Q9BXT8 1623 aaKnown RBP-1.67□□□□□ -2.68
SMC4-205ENST00000465563 ATP5EP2Q5VTU8 51 aa-1.68□□□□□ -2.68
SMC4-205ENST00000465563 NRAPQ86VF7 1730 aa-1.69□□□□□ -2.68
SMC4-205ENST00000465563 RALGAPBQ86X10 1494 aa-1.69□□□□□ -2.68
SMC4-205ENST00000465563 CROCC2H7BZ55 1655 aa-1.7□□□□□ -2.68
SMC4-205ENST00000465563 MUC3AQ02505 3323 aa-1.7□□□□□ -2.68
SMC4-205ENST00000465563 ENHOQ6UWT2 76 aa-1.7□□□□□ -2.68
SMC4-205ENST00000465563 CEP250Q9BV73 2442 aa-1.71□□□□□ -2.68
SMC4-205ENST00000465563 SMIM27A0A1W2PRY6 76 aa-1.71□□□□□ -2.68
SMC4-205ENST00000465563 SMIM13P0DJ93 91 aa-1.71□□□□□ -2.68
SMC4-205ENST00000465563 KIF21BO75037 1637 aa-1.71□□□□□ -2.68
SMC4-205ENST00000465563 EP400Q96L91 3159 aa-1.71□□□□□ -2.68
SMC4-205ENST00000465563 RRBP1Q9P2E9 1410 aaKnown RBP-1.72□□□□□ -2.68
SMC4-205ENST00000465563 ASXL1Q8IXJ9 1541 aa-1.72□□□□□ -2.69
SMC4-205ENST00000465563 INO80Q9ULG1 1556 aaPredicted RBP-1.72□□□□□ -2.69
SMC4-205ENST00000465563 PREX2Q70Z35 1606 aa-1.73□□□□□ -2.69
SMC4-205ENST00000465563 POLR2KP53803 58 aaKnown RBP-1.73□□□□□ -2.69
SMC4-205ENST00000465563 TTTY10Q9BZA0 68 aa-1.73□□□□□ -2.69
SMC4-205ENST00000465563 WDFY4Q6ZS81 3184 aa-1.73□□□□□ -2.69
SMC4-205ENST00000465563 DNAH14Q0VDD8 3507 aa-1.74□□□□□ -2.69
SMC4-205ENST00000465563 WFDC10BQ8IUB3 73 aa-1.74□□□□□ -2.69
SMC4-205ENST00000465563 ST20Q9HBF5 79 aa-1.74□□□□□ -2.69
SMC4-205ENST00000465563 CLASP1Q7Z460 1538 aa-1.75□□□□□ -2.69
SMC4-205ENST00000465563 ABCC6O95255 1503 aa-1.76□□□□□ -2.69
SMC4-205ENST00000465563 KDM5DQ9BY66 1539 aa-1.76□□□□□ -2.69
SMC4-205ENST00000465563 DCHS1Q96JQ0 3298 aa-1.76□□□□□ -2.69
SMC4-205ENST00000465563 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.77□□□□□ -2.69
SMC4-205ENST00000465563 DEFB114Q30KQ6 69 aa-1.78□□□□□ -2.69
SMC4-205ENST00000465563 EEA1Q15075 1411 aa-1.78□□□□□ -2.69
SMC4-205ENST00000465563 MYO5CQ9NQX4 1742 aa-1.78□□□□□ -2.69
SMC4-205ENST00000465563 DCAF1Q9Y4B6 1507 aa-1.79□□□□□ -2.7
SMC4-205ENST00000465563 H3BVH4 76 aa-1.79□□□□□ -2.7
SMC4-205ENST00000465563 GLI2P10070 1586 aa-1.8□□□□□ -2.7
SMC4-205ENST00000465563 ADIRFQ15847 76 aa-1.8□□□□□ -2.7
SMC4-205ENST00000465563 H3BUT2 72 aa-1.81□□□□□ -2.7
SMC4-205ENST00000465563 LINC00308Q8TCZ7 52 aa-1.81□□□□□ -2.7
SMC4-205ENST00000465563 NMES1Q9C002 83 aa-1.81□□□□□ -2.7
SMC4-205ENST00000465563 FAM208AQ9UK61 1670 aaKnown RBP-1.81□□□□□ -2.7
SMC4-205ENST00000465563 MKI67P46013 3256 aaKnown RBP-1.81□□□□□ -2.7
SMC4-205ENST00000465563 ABCC1P33527 1531 aa-1.81□□□□□ -2.7
SMC4-205ENST00000465563 NHSQ6T4R5 1651 aa-1.82□□□□□ -2.7
SMC4-205ENST00000465563 CFAP47Q6ZTR5 3102 aa-1.82□□□□□ -2.7
SMC4-205ENST00000465563 GNG2P59768 71 aa-1.82□□□□□ -2.7
SMC4-205ENST00000465563 TMEM167BQ9NRX6 74 aa-1.82□□□□□ -2.7
SMC4-205ENST00000465563 CFAP74Q9C0B2 1584 aa-1.82□□□□□ -2.7
SMC4-205ENST00000465563 RB1CC1Q8TDY2 1594 aa-1.84□□□□□ -2.7
SMC4-205ENST00000465563 DEFB131AP59861 70 aa-1.84□□□□□ -2.7
SMC4-205ENST00000465563 LMTK2Q8IWU2 1503 aa-1.85□□□□□ -2.71
SMC4-205ENST00000465563 K7EMI3 77 aa-1.85□□□□□ -2.71
SMC4-205ENST00000465563 S100A13Q99584 98 aa-1.85□□□□□ -2.71
SMC4-205ENST00000465563 DIP2AQ14689 1571 aa-1.85□□□□□ -2.71
SMC4-205ENST00000465563 USP34Q70CQ2 3546 aa-1.86□□□□□ -2.71
SMC4-205ENST00000465563 MROH1Q8NDA8 1641 aa-1.86□□□□□ -2.71
SMC4-205ENST00000465563 ATXN8Q156A1 80 aa-1.86□□□□□ -2.71
SMC4-205ENST00000465563 TIAM1Q13009 1591 aa-1.87□□□□□ -2.71
SMC4-205ENST00000465563 MADDQ8WXG6 1647 aa-1.9□□□□□ -2.71
SMC4-205ENST00000465563 M0R1W7 72 aa-1.9□□□□□ -2.71
SMC4-205ENST00000465563 C3P01024 1663 aa-1.9□□□□□ -2.71
SMC4-205ENST00000465563 GNG13Q9P2W3 67 aa-1.91□□□□□ -2.72
SMC4-205ENST00000465563 UNC80Q8N2C7 3258 aa-1.92□□□□□ -2.72
SMC4-205ENST00000465563 DNAH12Q6ZR08 3092 aa-1.93□□□□□ -2.72
SMC4-205ENST00000465563 SERF2P84101 59 aa-1.93□□□□□ -2.72
SMC4-205ENST00000465563 DEFB133Q30KQ1 61 aa-1.93□□□□□ -2.72
SMC4-205ENST00000465563 C18orf32Q8TCD1 76 aa-1.93□□□□□ -2.72
SMC4-205ENST00000465563 EFCAB6Q5THR3 1501 aa-1.94□□□□□ -2.72
SMC4-205ENST00000465563 S100ZQ8WXG8 99 aa-1.94□□□□□ -2.72
SMC4-205ENST00000465563 ANKARQ7Z5J8 1434 aa-1.94□□□□□ -2.72
SMC4-205ENST00000465563 SMIM2Q9BVW6 85 aa-1.95□□□□□ -2.72
SMC4-205ENST00000465563 HILPDAQ9Y5L2 63 aa-1.95□□□□□ -2.72
SMC4-205ENST00000465563 ABCA8O94911 1581 aa-1.95□□□□□ -2.72
SMC4-205ENST00000465563 CCDC18Q5T9S5 1454 aa-1.95□□□□□ -2.72
SMC4-205ENST00000465563 SCRIBQ14160 1630 aa-1.95□□□□□ -2.72
SMC4-205ENST00000465563 LINC01549A6NIU2 74 aa-1.96□□□□□ -2.72
SMC4-205ENST00000465563 CD52P31358 61 aa-1.96□□□□□ -2.72
SMC4-205ENST00000465563 H0YGX0 51 aa-1.97□□□□□ -2.72
SMC4-205ENST00000465563 LOC400499M0QZD8 3231 aa-1.97□□□□□ -2.73
SMC4-205ENST00000465563 TFF3Q07654 80 aa-1.98□□□□□ -2.73
SMC4-205ENST00000465563 KRTAP19-2Q3LHN2 52 aa-1.98□□□□□ -2.73
SMC4-205ENST00000465563 RHPN1-AS1Q9BWJ2 59 aa-1.98□□□□□ -2.73
SMC4-205ENST00000465563 ASPMQ8IZT6 3477 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms