RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
NUDCD3-204ENST00000464812 SMIM20Q8N5G0 67 aa4.57□□□□□ -1.68
NUDCD3-204ENST00000464812 MPLKIPQ8TAP9 179 aa4.57□□□□□ -1.68
NUDCD3-204ENST00000464812 LINC00208Q96KT6 92 aa4.57□□□□□ -1.68
NUDCD3-204ENST00000464812 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
NUDCD3-204ENST00000464812 C5orf47Q569G3 176 aa4.56□□□□□ -1.68
NUDCD3-204ENST00000464812 SERP2Q8N6R1 65 aa4.56□□□□□ -1.68
NUDCD3-204ENST00000464812 C1orf64Q8NEQ6 169 aa4.56□□□□□ -1.68
NUDCD3-204ENST00000464812 CYP4F30PQ9H0H9 118 aa4.56□□□□□ -1.68
NUDCD3-204ENST00000464812 LOC101927531A0A1B0GV80 90 aa4.55□□□□□ -1.68
NUDCD3-204ENST00000464812 MP68P56378 58 aa4.55□□□□□ -1.68
NUDCD3-204ENST00000464812 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
NUDCD3-204ENST00000464812 A0A0U1RQV1 116 aa4.54□□□□□ -1.68
NUDCD3-204ENST00000464812 H3BPC8 53 aa4.52□□□□□ -1.69
NUDCD3-204ENST00000464812 MT1HP80294 61 aa4.52□□□□□ -1.69
NUDCD3-204ENST00000464812 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
NUDCD3-204ENST00000464812 SNURFQ9Y675 71 aa4.52□□□□□ -1.69
NUDCD3-204ENST00000464812 COX7CP15954 63 aa4.51□□□□□ -1.69
NUDCD3-204ENST00000464812 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
NUDCD3-204ENST00000464812 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
NUDCD3-204ENST00000464812 CCDC179H3BU77 68 aa4.47□□□□□ -1.69
NUDCD3-204ENST00000464812 COX6B2Q6YFQ2 88 aa4.47□□□□□ -1.69
NUDCD3-204ENST00000464812 RBM12B-AS1Q9P1G2 102 aa4.47□□□□□ -1.69
NUDCD3-204ENST00000464812 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
NUDCD3-204ENST00000464812 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
NUDCD3-204ENST00000464812 H7BZZ5 65 aa4.41□□□□□ -1.7
NUDCD3-204ENST00000464812 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
NUDCD3-204ENST00000464812 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
NUDCD3-204ENST00000464812 DMAC1Q96GE9 116 aa4.39□□□□□ -1.71
NUDCD3-204ENST00000464812 NDUFC1O43677 76 aa4.38□□□□□ -1.71
NUDCD3-204ENST00000464812 TMEM258P61165 79 aa4.36□□□□□ -1.71
NUDCD3-204ENST00000464812 SPANXA2-OT1Q8N9U9 137 aa4.36□□□□□ -1.71
NUDCD3-204ENST00000464812 A8MUN3 132 aa4.35□□□□□ -1.71
NUDCD3-204ENST00000464812 LCA10Q71F78 164 aa4.34□□□□□ -1.71
NUDCD3-204ENST00000464812 S4R3F8 94 aa4.34□□□□□ -1.71
NUDCD3-204ENST00000464812 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.72
NUDCD3-204ENST00000464812 USH2AO75445 5202 aa4.33□□□□□ -1.72
NUDCD3-204ENST00000464812 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
NUDCD3-204ENST00000464812 M0R2T5 61 aa4.31□□□□□ -1.72
NUDCD3-204ENST00000464812 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
NUDCD3-204ENST00000464812 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
NUDCD3-204ENST00000464812 ACYP2P14621 99 aa4.28□□□□□ -1.72
NUDCD3-204ENST00000464812 COA5Q86WW8 74 aa4.26□□□□□ -1.73
NUDCD3-204ENST00000464812 MT2AP02795 61 aa4.25□□□□□ -1.73
NUDCD3-204ENST00000464812 MT1FP04733 61 aa4.24□□□□□ -1.73
NUDCD3-204ENST00000464812 CSAG1Q6PB30 78 aa4.22□□□□□ -1.73
NUDCD3-204ENST00000464812 SERP1Q9Y6X1 66 aa4.22□□□□□ -1.73
NUDCD3-204ENST00000464812 CHKB-CPT1BH3BT56 60 aa4.2□□□□□ -1.74
NUDCD3-204ENST00000464812 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
NUDCD3-204ENST00000464812 SMIM26A0A096LP01 95 aa4.15□□□□□ -1.75
NUDCD3-204ENST00000464812 H0YAA0 97 aa4.14□□□□□ -1.75
NUDCD3-204ENST00000464812 ADM2Q7Z4H4 148 aa4.14□□□□□ -1.75
NUDCD3-204ENST00000464812 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
NUDCD3-204ENST00000464812 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
NUDCD3-204ENST00000464812 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
NUDCD3-204ENST00000464812 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
NUDCD3-204ENST00000464812 P0C880 135 aa4.11□□□□□ -1.75
NUDCD3-204ENST00000464812 V9GYY9 64 aa4.07□□□□□ -1.76
NUDCD3-204ENST00000464812 Q1T7F1 81 aa4.03□□□□□ -1.76
NUDCD3-204ENST00000464812 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
NUDCD3-204ENST00000464812 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
NUDCD3-204ENST00000464812 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
NUDCD3-204ENST00000464812 A0A1B0GU69 56 aa3.99□□□□□ -1.77
NUDCD3-204ENST00000464812 CRIPTQ9P021 101 aa3.99□□□□□ -1.77
NUDCD3-204ENST00000464812 M0QZ58 72 aa3.97□□□□□ -1.77
NUDCD3-204ENST00000464812 SEC61GP60059 68 aa3.97□□□□□ -1.77
NUDCD3-204ENST00000464812 R4GN34 69 aa3.96□□□□□ -1.78
NUDCD3-204ENST00000464812 MT1BP07438 61 aa3.95□□□□□ -1.78
NUDCD3-204ENST00000464812 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
NUDCD3-204ENST00000464812 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
NUDCD3-204ENST00000464812 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
NUDCD3-204ENST00000464812 A0A1B0GU33 70 aa3.93□□□□□ -1.78
NUDCD3-204ENST00000464812 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
NUDCD3-204ENST00000464812 PSPHP1O15172 72 aa3.92□□□□□ -1.78
NUDCD3-204ENST00000464812 SPATA8Q6RVD6 105 aa3.92□□□□□ -1.78
NUDCD3-204ENST00000464812 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
NUDCD3-204ENST00000464812 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
NUDCD3-204ENST00000464812 Q5VV11 94 aa3.91□□□□□ -1.78
NUDCD3-204ENST00000464812 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
NUDCD3-204ENST00000464812 A8MU10 97 aa3.86□□□□□ -1.79
NUDCD3-204ENST00000464812 A0A0D9SG42 100 aa3.85□□□□□ -1.79
NUDCD3-204ENST00000464812 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
NUDCD3-204ENST00000464812 UQCR11O14957 56 aa3.82□□□□□ -1.8
NUDCD3-204ENST00000464812 A6NN06 94 aa3.81□□□□□ -1.8
NUDCD3-204ENST00000464812 A6NED7 52 aa3.8□□□□□ -1.8
NUDCD3-204ENST00000464812 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
NUDCD3-204ENST00000464812 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
NUDCD3-204ENST00000464812 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
NUDCD3-204ENST00000464812 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.8
NUDCD3-204ENST00000464812 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
NUDCD3-204ENST00000464812 MT1XP80297 61 aa3.77□□□□□ -1.81
NUDCD3-204ENST00000464812 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
NUDCD3-204ENST00000464812 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
NUDCD3-204ENST00000464812 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
NUDCD3-204ENST00000464812 KMT2DO14686 5537 aa3.73□□□□□ -1.81
NUDCD3-204ENST00000464812 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
NUDCD3-204ENST00000464812 NEBP20929 6669 aa3.69□□□□□ -1.82
NUDCD3-204ENST00000464812 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
NUDCD3-204ENST00000464812 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
NUDCD3-204ENST00000464812 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms