RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TRAV7A0A075B6U4 112 aa6.79□□□□□ -1.32
SQSTM1-205ENST00000464493 A8MUN3 132 aa6.79□□□□□ -1.32
SQSTM1-205ENST00000464493 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
SQSTM1-205ENST00000464493 LCE2BO14633 110 aa6.75□□□□□ -1.33
SQSTM1-205ENST00000464493 NDUFC1O43677 76 aa6.72□□□□□ -1.33
SQSTM1-205ENST00000464493 USH2AO75445 5202 aa6.71□□□□□ -1.34
SQSTM1-205ENST00000464493 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
SQSTM1-205ENST00000464493 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
SQSTM1-205ENST00000464493 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
SQSTM1-205ENST00000464493 SSPOA2VEC9 5147 aa6.61□□□□□ -1.35
SQSTM1-205ENST00000464493 H0YAA0 97 aa6.59□□□□□ -1.35
SQSTM1-205ENST00000464493 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
SQSTM1-205ENST00000464493 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
SQSTM1-205ENST00000464493 ACYP2P14621 99 aa6.57□□□□□ -1.36
SQSTM1-205ENST00000464493 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
SQSTM1-205ENST00000464493 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
SQSTM1-205ENST00000464493 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
SQSTM1-205ENST00000464493 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
SQSTM1-205ENST00000464493 COX7CP15954 63 aa6.5□□□□□ -1.37
SQSTM1-205ENST00000464493 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
SQSTM1-205ENST00000464493 KRTAP19-8Q3LI54 63 aa6.46□□□□□ -1.38
SQSTM1-205ENST00000464493 CHKB-CPT1BH3BT56 60 aa6.45□□□□□ -1.38
SQSTM1-205ENST00000464493 Q5VV11 94 aa6.45□□□□□ -1.38
SQSTM1-205ENST00000464493 SPTSSBQ8NFR3 76 aa6.45□□□□□ -1.38
SQSTM1-205ENST00000464493 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
SQSTM1-205ENST00000464493 MT1BP07438 61 aa6.42□□□□□ -1.38
SQSTM1-205ENST00000464493 P0C880 135 aa6.4□□□□□ -1.38
SQSTM1-205ENST00000464493 ANAPC13Q9BS18 74 aa6.39□□□□□ -1.39
SQSTM1-205ENST00000464493 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
SQSTM1-205ENST00000464493 H7BZZ5 65 aa6.35□□□□□ -1.39
SQSTM1-205ENST00000464493 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
SQSTM1-205ENST00000464493 R4GN34 69 aa6.35□□□□□ -1.39
SQSTM1-205ENST00000464493 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
SQSTM1-205ENST00000464493 COA5Q86WW8 74 aa6.31□□□□□ -1.4
SQSTM1-205ENST00000464493 M0QZ58 72 aa6.3□□□□□ -1.4
SQSTM1-205ENST00000464493 A6NN06 94 aa6.28□□□□□ -1.4
SQSTM1-205ENST00000464493 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
SQSTM1-205ENST00000464493 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
SQSTM1-205ENST00000464493 CCDC179H3BU77 68 aa6.25□□□□□ -1.41
SQSTM1-205ENST00000464493 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
SQSTM1-205ENST00000464493 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
SQSTM1-205ENST00000464493 MACF1Q9UPN3 7388 aaKnown RBP6.21□□□□□ -1.42
SQSTM1-205ENST00000464493 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
SQSTM1-205ENST00000464493 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.43
SQSTM1-205ENST00000464493 SEC61GP60059 68 aa6.14□□□□□ -1.43
SQSTM1-205ENST00000464493 SERP1Q9Y6X1 66 aa6.12□□□□□ -1.43
SQSTM1-205ENST00000464493 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
SQSTM1-205ENST00000464493 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
SQSTM1-205ENST00000464493 MT1XP80297 61 aa6.08□□□□□ -1.44
SQSTM1-205ENST00000464493 PCP4P48539 62 aa6.07□□□□□ -1.44
SQSTM1-205ENST00000464493 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
SQSTM1-205ENST00000464493 TMEM258P61165 79 aa6.03□□□□□ -1.44
SQSTM1-205ENST00000464493 A0A1B0GU33 70 aa6.01□□□□□ -1.45
SQSTM1-205ENST00000464493 KRTAP6-3Q3LI67 103 aa6.01□□□□□ -1.45
SQSTM1-205ENST00000464493 A0A1B0GU69 56 aa5.99□□□□□ -1.45
SQSTM1-205ENST00000464493 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
SQSTM1-205ENST00000464493 A0A0D9SG42 100 aa5.92□□□□□ -1.46
SQSTM1-205ENST00000464493 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
SQSTM1-205ENST00000464493 PRR15LQ9BU68 103 aa5.89□□□□□ -1.47
SQSTM1-205ENST00000464493 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
SQSTM1-205ENST00000464493 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
SQSTM1-205ENST00000464493 KMT2DO14686 5537 aa5.83□□□□□ -1.48
SQSTM1-205ENST00000464493 SMIM26A0A096LP01 95 aa5.83□□□□□ -1.48
SQSTM1-205ENST00000464493 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
SQSTM1-205ENST00000464493 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
SQSTM1-205ENST00000464493 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
SQSTM1-205ENST00000464493 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
SQSTM1-205ENST00000464493 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
SQSTM1-205ENST00000464493 A8MU10 97 aa5.77□□□□□ -1.49
SQSTM1-205ENST00000464493 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
SQSTM1-205ENST00000464493 NEBP20929 6669 aa5.76□□□□□ -1.49
SQSTM1-205ENST00000464493 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
SQSTM1-205ENST00000464493 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
SQSTM1-205ENST00000464493 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
SQSTM1-205ENST00000464493 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
SQSTM1-205ENST00000464493 UQCR11O14957 56 aa5.69□□□□□ -1.5
SQSTM1-205ENST00000464493 V9GYY9 64 aa5.68□□□□□ -1.5
SQSTM1-205ENST00000464493 Q1T7F1 81 aa5.64□□□□□ -1.51
SQSTM1-205ENST00000464493 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
SQSTM1-205ENST00000464493 RPS28P62857 69 aaKnown RBP5.62□□□□□ -1.51
SQSTM1-205ENST00000464493 PSPHP1O15172 72 aa5.6□□□□□ -1.51
SQSTM1-205ENST00000464493 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
SQSTM1-205ENST00000464493 SPRR2EP22531 72 aa5.57□□□□□ -1.52
SQSTM1-205ENST00000464493 SPRR2BP35325 72 aa5.57□□□□□ -1.52
SQSTM1-205ENST00000464493 SPRR2AP35326 72 aa5.57□□□□□ -1.52
SQSTM1-205ENST00000464493 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
SQSTM1-205ENST00000464493 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
SQSTM1-205ENST00000464493 TNP1P09430 55 aa5.48□□□□□ -1.53
SQSTM1-205ENST00000464493 KRTAP20-1Q3LI63 56 aa5.46□□□□□ -1.54
SQSTM1-205ENST00000464493 K7ERS5 55 aa5.44□□□□□ -1.54
SQSTM1-205ENST00000464493 A6NED7 52 aa5.43□□□□□ -1.54
SQSTM1-205ENST00000464493 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
SQSTM1-205ENST00000464493 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
SQSTM1-205ENST00000464493 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
SQSTM1-205ENST00000464493 SPRR2DP22532 72 aa5.38□□□□□ -1.55
SQSTM1-205ENST00000464493 MT1EP04732 61 aa5.37□□□□□ -1.55
SQSTM1-205ENST00000464493 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
SQSTM1-205ENST00000464493 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
SQSTM1-205ENST00000464493 H3BS24 57 aa5.31□□□□□ -1.56
SQSTM1-205ENST00000464493 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms