RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 PKD1L1Q8TDX9 2849 aa2.13□□□□□ -2.07
CCNL1-204ENST00000464316 RYR2Q92736 4967 aa2.13□□□□□ -2.07
CCNL1-204ENST00000464316 RPS29P62273 56 aaKnown RBP2.13□□□□□ -2.07
CCNL1-204ENST00000464316 C20orf166-AS1Q96NR2 134 aa2.13□□□□□ -2.07
CCNL1-204ENST00000464316 STARD9Q9P2P6 4700 aa2.13□□□□□ -2.07
CCNL1-204ENST00000464316 OTOGQ6ZRI0 2925 aa2.12□□□□□ -2.07
CCNL1-204ENST00000464316 TENM2Q9NT68 2774 aa2.12□□□□□ -2.07
CCNL1-204ENST00000464316 DNAH5Q8TE73 4624 aa2.12□□□□□ -2.07
CCNL1-204ENST00000464316 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
CCNL1-204ENST00000464316 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
CCNL1-204ENST00000464316 HECTD1Q9ULT8 2610 aa2.12□□□□□ -2.07
CCNL1-204ENST00000464316 TENM1Q9UKZ4 2725 aa2.11□□□□□ -2.07
CCNL1-204ENST00000464316 P0C880 135 aa2.11□□□□□ -2.07
CCNL1-204ENST00000464316 LRP1BQ9NZR2 4599 aa2.11□□□□□ -2.07
CCNL1-204ENST00000464316 A0A0D9SG42 100 aa2.1□□□□□ -2.07
CCNL1-204ENST00000464316 STAB1Q9NY15 2570 aa2.1□□□□□ -2.07
CCNL1-204ENST00000464316 STAB2Q8WWQ8 2551 aa2.09□□□□□ -2.07
CCNL1-204ENST00000464316 MGAM2Q2M2H8 2515 aa2.09□□□□□ -2.07
CCNL1-204ENST00000464316 HYDINQ4G0P3 5121 aa2.08□□□□□ -2.08
CCNL1-204ENST00000464316 C9orf92A6NGG3 77 aa2.08□□□□□ -2.08
CCNL1-204ENST00000464316 LORP23490 312 aaPredicted RBP2.08□□□□□ -2.08
CCNL1-204ENST00000464316 RYR3Q15413 4870 aa2.07□□□□□ -2.08
CCNL1-204ENST00000464316 KRTAP1-4P0C5Y4 121 aa2.07□□□□□ -2.08
CCNL1-204ENST00000464316 RYR1P21817 5038 aa2.07□□□□□ -2.08
CCNL1-204ENST00000464316 TGP01266 2768 aa2.07□□□□□ -2.08
CCNL1-204ENST00000464316 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
CCNL1-204ENST00000464316 A0A0A0MQY5 61 aa2.06□□□□□ -2.08
CCNL1-204ENST00000464316 TPRXLQ17RH7 258 aa2.05□□□□□ -2.08
CCNL1-204ENST00000464316 KRTAP3-1Q9BYR8 98 aa2.05□□□□□ -2.08
CCNL1-204ENST00000464316 LCE1DQ5T752 114 aa2.05□□□□□ -2.08
CCNL1-204ENST00000464316 KRTAP15-1Q3LI76 137 aa2.05□□□□□ -2.08
CCNL1-204ENST00000464316 LUZP6Q538Z0 58 aa2.05□□□□□ -2.08
CCNL1-204ENST00000464316 KRTAP10-2P60368 255 aa2.04□□□□□ -2.08
CCNL1-204ENST00000464316 S4R3F8 94 aa2.04□□□□□ -2.08
CCNL1-204ENST00000464316 KRTAP10-1P60331 282 aa2.04□□□□□ -2.08
CCNL1-204ENST00000464316 DMBT1Q9UGM3 2413 aaPredicted RBP2.04□□□□□ -2.08
CCNL1-204ENST00000464316 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
CCNL1-204ENST00000464316 M0QZ58 72 aa2.02□□□□□ -2.09
CCNL1-204ENST00000464316 FBN1P35555 2871 aaKnown RBP2.02□□□□□ -2.09
CCNL1-204ENST00000464316 KRTAP4-5Q9BYR2 181 aa2.01□□□□□ -2.09
CCNL1-204ENST00000464316 BIRC6Q9NR09 4857 aa2.01□□□□□ -2.09
CCNL1-204ENST00000464316 KRTAP10-6P60371 365 aaPredicted RBP2.01□□□□□ -2.09
CCNL1-204ENST00000464316 KMT2CQ8NEZ4 4911 aaKnown RBP2□□□□□ -2.09
CCNL1-204ENST00000464316 COL7A1Q02388 2944 aa2□□□□□ -2.09
CCNL1-204ENST00000464316 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
CCNL1-204ENST00000464316 PLAC4Q8WY50 150 aa1.98□□□□□ -2.09
CCNL1-204ENST00000464316 KRTAP12-2P59991 146 aa1.97□□□□□ -2.09
CCNL1-204ENST00000464316 SMR3BP02814 79 aaPredicted RBP1.96□□□□□ -2.1
CCNL1-204ENST00000464316 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
CCNL1-204ENST00000464316 HERC2O95714 4834 aa1.95□□□□□ -2.1
CCNL1-204ENST00000464316 J3QL48 77 aa1.95□□□□□ -2.1
CCNL1-204ENST00000464316 PP632Q6XCG6 107 aa1.95□□□□□ -2.1
CCNL1-204ENST00000464316 KRTAP4-11Q9BYQ6 195 aa1.94□□□□□ -2.1
CCNL1-204ENST00000464316 R4GN34 69 aa1.94□□□□□ -2.1
CCNL1-204ENST00000464316 MEGF8Q7Z7M0 2845 aa1.94□□□□□ -2.1
CCNL1-204ENST00000464316 LCE3BQ5TA77 95 aa1.94□□□□□ -2.1
CCNL1-204ENST00000464316 SEC61BP60468 96 aaKnown RBP1.93□□□□□ -2.1
CCNL1-204ENST00000464316 CAMK2N1Q7Z7J9 78 aa1.9□□□□□ -2.11
CCNL1-204ENST00000464316 KRTAP19-1Q8IUB9 90 aa1.9□□□□□ -2.11
CCNL1-204ENST00000464316 ABCA13Q86UQ4 5058 aa1.87□□□□□ -2.11
CCNL1-204ENST00000464316 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
CCNL1-204ENST00000464316 LRP2P98164 4655 aa1.86□□□□□ -2.11
CCNL1-204ENST00000464316 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
CCNL1-204ENST00000464316 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
CCNL1-204ENST00000464316 PCLOQ9Y6V0 5065 aa1.84□□□□□ -2.11
CCNL1-204ENST00000464316 EPPK1P58107 5090 aaKnown RBP1.84□□□□□ -2.11
CCNL1-204ENST00000464316 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
CCNL1-204ENST00000464316 TNP1P09430 55 aa1.83□□□□□ -2.12
CCNL1-204ENST00000464316 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
CCNL1-204ENST00000464316 Q5VSD8 79 aa1.81□□□□□ -2.12
CCNL1-204ENST00000464316 KRTAP23-1A1A580 65 aa1.8□□□□□ -2.12
CCNL1-204ENST00000464316 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
CCNL1-204ENST00000464316 A0A1B0GVY2 172 aa1.79□□□□□ -2.12
CCNL1-204ENST00000464316 KIAA1109Q2LD37 5005 aa1.79□□□□□ -2.12
CCNL1-204ENST00000464316 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
CCNL1-204ENST00000464316 INE1O15225 51 aa1.77□□□□□ -2.13
CCNL1-204ENST00000464316 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
CCNL1-204ENST00000464316 HMCN2Q8NDA2 5059 aa1.72□□□□□ -2.13
CCNL1-204ENST00000464316 HERC1Q15751 4861 aa1.7□□□□□ -2.14
CCNL1-204ENST00000464316 MT1HL1P0DM35 61 aa1.7□□□□□ -2.14
CCNL1-204ENST00000464316 KRTAP5-9P26371 169 aa1.66□□□□□ -2.14
CCNL1-204ENST00000464316 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
CCNL1-204ENST00000464316 FAT4Q6V0I7 4981 aa1.62□□□□□ -2.15
CCNL1-204ENST00000464316 M0R2T5 61 aa1.6□□□□□ -2.15
CCNL1-204ENST00000464316 LPAP08519 4548 aa1.6□□□□□ -2.15
CCNL1-204ENST00000464316 LCE3AQ5TA76 89 aa1.59□□□□□ -2.15
CCNL1-204ENST00000464316 LCE5AQ5TCM9 118 aa1.58□□□□□ -2.16
CCNL1-204ENST00000464316 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
CCNL1-204ENST00000464316 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
CCNL1-204ENST00000464316 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
CCNL1-204ENST00000464316 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
CCNL1-204ENST00000464316 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
CCNL1-204ENST00000464316 KRTAP10-10P60014 251 aa1.54□□□□□ -2.16
CCNL1-204ENST00000464316 KRTAP10-12P60413 245 aa1.53□□□□□ -2.16
CCNL1-204ENST00000464316 KRTAP19-4Q3LI73 84 aa1.53□□□□□ -2.17
CCNL1-204ENST00000464316 KRTAP5-4Q6L8H1 288 aa1.51□□□□□ -2.17
CCNL1-204ENST00000464316 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
CCNL1-204ENST00000464316 KRTAP9-7A8MTY7 169 aa1.49□□□□□ -2.17
CCNL1-204ENST00000464316 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
CCNL1-204ENST00000464316 LCE4AQ5TA78 99 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms