RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 CHKB-CPT1BH3BT56 60 aa7.65□□□□□ -1.18
GYPC-205ENST00000464053 LCA10Q71F78 164 aa7.62□□□□□ -1.19
GYPC-205ENST00000464053 S4R3F8 94 aa7.61□□□□□ -1.19
GYPC-205ENST00000464053 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
GYPC-205ENST00000464053 LCE2CQ5TA81 110 aa7.59□□□□□ -1.19
GYPC-205ENST00000464053 FLGP20930 4061 aaPredicted RBP7.57□□□□□ -1.2
GYPC-205ENST00000464053 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
GYPC-205ENST00000464053 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
GYPC-205ENST00000464053 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
GYPC-205ENST00000464053 CSAG1Q6PB30 78 aa7.43□□□□□ -1.22
GYPC-205ENST00000464053 MT1HP80294 61 aa7.43□□□□□ -1.22
GYPC-205ENST00000464053 Q1T7F1 81 aa7.41□□□□□ -1.22
GYPC-205ENST00000464053 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.23
GYPC-205ENST00000464053 SEC61GP60059 68 aa7.37□□□□□ -1.23
GYPC-205ENST00000464053 V9GYY9 64 aa7.35□□□□□ -1.23
GYPC-205ENST00000464053 M0R2T5 61 aa7.32□□□□□ -1.24
GYPC-205ENST00000464053 PSPHP1O15172 72 aa7.32□□□□□ -1.24
GYPC-205ENST00000464053 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
GYPC-205ENST00000464053 A0A1B0GU69 56 aa7.31□□□□□ -1.24
GYPC-205ENST00000464053 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
GYPC-205ENST00000464053 ADM2Q7Z4H4 148 aa7.27□□□□□ -1.25
GYPC-205ENST00000464053 PRO0628Q9UI54 55 aa7.27□□□□□ -1.25
GYPC-205ENST00000464053 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
GYPC-205ENST00000464053 Q5VV11 94 aa7.25□□□□□ -1.25
GYPC-205ENST00000464053 H0YAA0 97 aa7.24□□□□□ -1.25
GYPC-205ENST00000464053 P0C880 135 aa7.24□□□□□ -1.25
GYPC-205ENST00000464053 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
GYPC-205ENST00000464053 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
GYPC-205ENST00000464053 KRTAP9-8Q9BYQ0 159 aa7.14□□□□□ -1.27
GYPC-205ENST00000464053 A0A1B0GU33 70 aa7.13□□□□□ -1.27
GYPC-205ENST00000464053 MT2AP02795 61 aa7.11□□□□□ -1.27
GYPC-205ENST00000464053 MT1FP04733 61 aa7.08□□□□□ -1.28
GYPC-205ENST00000464053 KRTAP13-4Q3LI77 160 aa7.08□□□□□ -1.28
GYPC-205ENST00000464053 A6NED7 52 aa7.06□□□□□ -1.28
GYPC-205ENST00000464053 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
GYPC-205ENST00000464053 UQCR11O14957 56 aa7.06□□□□□ -1.28
GYPC-205ENST00000464053 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
GYPC-205ENST00000464053 M0QZ58 72 aa7□□□□□ -1.29
GYPC-205ENST00000464053 R4GN34 69 aa7□□□□□ -1.29
GYPC-205ENST00000464053 MIR22HGQ0VDD5 57 aa6.99□□□□□ -1.29
GYPC-205ENST00000464053 A8MU10 97 aa6.97□□□□□ -1.29
GYPC-205ENST00000464053 CRIPTQ9P021 101 aa6.95□□□□□ -1.3
GYPC-205ENST00000464053 A0A0D9SG42 100 aa6.92□□□□□ -1.3
GYPC-205ENST00000464053 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
GYPC-205ENST00000464053 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
GYPC-205ENST00000464053 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
GYPC-205ENST00000464053 LINC01554Q52M75 96 aa6.9□□□□□ -1.31
GYPC-205ENST00000464053 PMAIP1Q13794 54 aa6.88□□□□□ -1.31
GYPC-205ENST00000464053 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
GYPC-205ENST00000464053 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
GYPC-205ENST00000464053 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
GYPC-205ENST00000464053 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
GYPC-205ENST00000464053 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
GYPC-205ENST00000464053 LCE2BO14633 110 aa6.73□□□□□ -1.33
GYPC-205ENST00000464053 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
GYPC-205ENST00000464053 A6NN06 94 aa6.71□□□□□ -1.33
GYPC-205ENST00000464053 MT1BP07438 61 aa6.67□□□□□ -1.34
GYPC-205ENST00000464053 K7ERS5 55 aa6.64□□□□□ -1.35
GYPC-205ENST00000464053 USH2AO75445 5202 aa6.63□□□□□ -1.35
GYPC-205ENST00000464053 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
GYPC-205ENST00000464053 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
GYPC-205ENST00000464053 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
GYPC-205ENST00000464053 H3BS24 57 aa6.54□□□□□ -1.36
GYPC-205ENST00000464053 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
GYPC-205ENST00000464053 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
GYPC-205ENST00000464053 MT1XP80297 61 aa6.43□□□□□ -1.38
GYPC-205ENST00000464053 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
GYPC-205ENST00000464053 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
GYPC-205ENST00000464053 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
GYPC-205ENST00000464053 ROMO1P60602 79 aa6.39□□□□□ -1.39
GYPC-205ENST00000464053 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
GYPC-205ENST00000464053 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
GYPC-205ENST00000464053 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
GYPC-205ENST00000464053 TNP1P09430 55 aa6.2□□□□□ -1.42
GYPC-205ENST00000464053 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
GYPC-205ENST00000464053 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
GYPC-205ENST00000464053 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
GYPC-205ENST00000464053 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
GYPC-205ENST00000464053 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
GYPC-205ENST00000464053 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
GYPC-205ENST00000464053 KMT2DO14686 5537 aa6.02□□□□□ -1.45
GYPC-205ENST00000464053 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
GYPC-205ENST00000464053 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
GYPC-205ENST00000464053 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
GYPC-205ENST00000464053 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
GYPC-205ENST00000464053 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
GYPC-205ENST00000464053 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
GYPC-205ENST00000464053 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
GYPC-205ENST00000464053 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
GYPC-205ENST00000464053 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
GYPC-205ENST00000464053 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
GYPC-205ENST00000464053 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
GYPC-205ENST00000464053 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
GYPC-205ENST00000464053 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
GYPC-205ENST00000464053 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
GYPC-205ENST00000464053 MT1EP04732 61 aa5.63□□□□□ -1.51
GYPC-205ENST00000464053 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
GYPC-205ENST00000464053 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
GYPC-205ENST00000464053 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
GYPC-205ENST00000464053 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms