RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 LCA10Q71F78 164 aa8.98□□□□□ -0.97
LMNB1-204ENST00000463908 KRTAP10-10P60014 251 aa8.96□□□□□ -0.98
LMNB1-204ENST00000463908 USH2AO75445 5202 aa8.96□□□□□ -0.98
LMNB1-204ENST00000463908 KRTAP3-3Q9BYR6 98 aa8.95□□□□□ -0.98
LMNB1-204ENST00000463908 KRTAP9-3Q9BYQ3 159 aa8.91□□□□□ -0.98
LMNB1-204ENST00000463908 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
LMNB1-204ENST00000463908 A8MUN3 132 aa8.88□□□□□ -0.99
LMNB1-204ENST00000463908 SERP2Q8N6R1 65 aa8.84□□□□□ -0.99
LMNB1-204ENST00000463908 SNURFQ9Y675 71 aa8.81□□□□□ -1
LMNB1-204ENST00000463908 FCGBPQ9Y6R7 5405 aaPredicted RBP8.81□□□□□ -1
LMNB1-204ENST00000463908 LCE2BO14633 110 aa8.79□□□□□ -1
LMNB1-204ENST00000463908 DMAC1Q96GE9 116 aa8.79□□□□□ -1
LMNB1-204ENST00000463908 NDUFC1O43677 76 aa8.75□□□□□ -1.01
LMNB1-204ENST00000463908 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
LMNB1-204ENST00000463908 COX7CP15954 63 aa8.68□□□□□ -1.02
LMNB1-204ENST00000463908 MACF1Q9UPN3 7388 aaKnown RBP8.64□□□□□ -1.03
LMNB1-204ENST00000463908 SYNE2Q8WXH0 6885 aaKnown RBP8.63□□□□□ -1.03
LMNB1-204ENST00000463908 ACYP2P14621 99 aa8.63□□□□□ -1.03
LMNB1-204ENST00000463908 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
LMNB1-204ENST00000463908 H0YAA0 97 aa8.6□□□□□ -1.03
LMNB1-204ENST00000463908 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
LMNB1-204ENST00000463908 CYSTM1Q9H1C7 97 aa8.54□□□□□ -1.04
LMNB1-204ENST00000463908 ADM2Q7Z4H4 148 aa8.53□□□□□ -1.04
LMNB1-204ENST00000463908 ANAPC13Q9BS18 74 aa8.53□□□□□ -1.04
LMNB1-204ENST00000463908 SPRR2GQ9BYE4 73 aa8.53□□□□□ -1.04
LMNB1-204ENST00000463908 H7BZZ5 65 aa8.48□□□□□ -1.05
LMNB1-204ENST00000463908 CRIPTQ9P021 101 aa8.47□□□□□ -1.05
LMNB1-204ENST00000463908 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
LMNB1-204ENST00000463908 CHKB-CPT1BH3BT56 60 aa8.43□□□□□ -1.06
LMNB1-204ENST00000463908 KRTAP19-8Q3LI54 63 aa8.43□□□□□ -1.06
LMNB1-204ENST00000463908 P0C880 135 aa8.42□□□□□ -1.06
LMNB1-204ENST00000463908 CCDC179H3BU77 68 aa8.41□□□□□ -1.06
LMNB1-204ENST00000463908 MT1BP07438 61 aa8.4□□□□□ -1.06
LMNB1-204ENST00000463908 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.06
LMNB1-204ENST00000463908 KRTAP19-6Q3LI70 58 aa8.38□□□□□ -1.07
LMNB1-204ENST00000463908 COA5Q86WW8 74 aa8.35□□□□□ -1.07
LMNB1-204ENST00000463908 Q5VV11 94 aa8.34□□□□□ -1.07
LMNB1-204ENST00000463908 KRTAP6-3Q3LI67 103 aa8.24□□□□□ -1.09
LMNB1-204ENST00000463908 R4GN34 69 aa8.24□□□□□ -1.09
LMNB1-204ENST00000463908 M0QZ58 72 aa8.21□□□□□ -1.1
LMNB1-204ENST00000463908 NEBP20929 6669 aa8.17□□□□□ -1.1
LMNB1-204ENST00000463908 KRTAP10-5P60370 271 aa8.1□□□□□ -1.11
LMNB1-204ENST00000463908 MUC12Q9UKN1 5478 aa8.09□□□□□ -1.11
LMNB1-204ENST00000463908 A6NN06 94 aa8.09□□□□□ -1.11
LMNB1-204ENST00000463908 ATP5EP56381 51 aaPredicted RBP8.09□□□□□ -1.11
LMNB1-204ENST00000463908 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
LMNB1-204ENST00000463908 TMEM258P61165 79 aa8.04□□□□□ -1.12
LMNB1-204ENST00000463908 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
LMNB1-204ENST00000463908 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
LMNB1-204ENST00000463908 SEC61GP60059 68 aa8.01□□□□□ -1.13
LMNB1-204ENST00000463908 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
LMNB1-204ENST00000463908 MT1XP80297 61 aa7.96□□□□□ -1.14
LMNB1-204ENST00000463908 A0A1B0GU33 70 aa7.9□□□□□ -1.14
LMNB1-204ENST00000463908 A0A1B0GU69 56 aa7.89□□□□□ -1.15
LMNB1-204ENST00000463908 KRTAP20-1Q3LI63 56 aa7.89□□□□□ -1.15
LMNB1-204ENST00000463908 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
LMNB1-204ENST00000463908 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
LMNB1-204ENST00000463908 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
LMNB1-204ENST00000463908 A0A0D9SG42 100 aa7.77□□□□□ -1.17
LMNB1-204ENST00000463908 PCP4P48539 62 aa7.77□□□□□ -1.17
LMNB1-204ENST00000463908 MDN1Q9NU22 5596 aa7.76□□□□□ -1.17
LMNB1-204ENST00000463908 PRR15LQ9BU68 103 aa7.72□□□□□ -1.17
LMNB1-204ENST00000463908 KMT2DO14686 5537 aa7.71□□□□□ -1.18
LMNB1-204ENST00000463908 KRTAP5-9P26371 169 aa7.67□□□□□ -1.18
LMNB1-204ENST00000463908 KRTAP12-1P59990 96 aa7.66□□□□□ -1.18
LMNB1-204ENST00000463908 A8MU10 97 aa7.65□□□□□ -1.18
LMNB1-204ENST00000463908 KRTAP12-2P59991 146 aa7.65□□□□□ -1.18
LMNB1-204ENST00000463908 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
LMNB1-204ENST00000463908 SPINT4Q6UDR6 99 aa7.63□□□□□ -1.19
LMNB1-204ENST00000463908 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
LMNB1-204ENST00000463908 KRTAP10-7P60409 375 aaPredicted RBP7.61□□□□□ -1.19
LMNB1-204ENST00000463908 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
LMNB1-204ENST00000463908 Q1T7F1 81 aa7.55□□□□□ -1.2
LMNB1-204ENST00000463908 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
LMNB1-204ENST00000463908 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
LMNB1-204ENST00000463908 KRTAP2-3P0C7H8 128 aa7.52□□□□□ -1.21
LMNB1-204ENST00000463908 KRTAP2-4Q9BYR9 128 aa7.52□□□□□ -1.21
LMNB1-204ENST00000463908 V9GYY9 64 aa7.52□□□□□ -1.21
LMNB1-204ENST00000463908 UQCR11O14957 56 aa7.51□□□□□ -1.21
LMNB1-204ENST00000463908 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
LMNB1-204ENST00000463908 PSPHP1O15172 72 aa7.47□□□□□ -1.21
LMNB1-204ENST00000463908 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
LMNB1-204ENST00000463908 MIR22HGQ0VDD5 57 aa7.39□□□□□ -1.23
LMNB1-204ENST00000463908 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
LMNB1-204ENST00000463908 SPRR2EP22531 72 aa7.34□□□□□ -1.23
LMNB1-204ENST00000463908 SPRR2BP35325 72 aa7.34□□□□□ -1.23
LMNB1-204ENST00000463908 SPRR2AP35326 72 aa7.34□□□□□ -1.23
LMNB1-204ENST00000463908 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
LMNB1-204ENST00000463908 KRTAP2-2Q9BYT5 123 aa7.25□□□□□ -1.25
LMNB1-204ENST00000463908 KRTAP2-1Q9BYU5 128 aa7.25□□□□□ -1.25
LMNB1-204ENST00000463908 A6NED7 52 aa7.2□□□□□ -1.26
LMNB1-204ENST00000463908 LCE1AQ5T7P2 110 aa7.17□□□□□ -1.26
LMNB1-204ENST00000463908 TNP1P09430 55 aa7.14□□□□□ -1.27
LMNB1-204ENST00000463908 KRTAP19-7Q3SYF9 63 aa7.12□□□□□ -1.27
LMNB1-204ENST00000463908 K7ERS5 55 aa7.11□□□□□ -1.27
LMNB1-204ENST00000463908 SPRR2DP22532 72 aa7.1□□□□□ -1.27
LMNB1-204ENST00000463908 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
LMNB1-204ENST00000463908 MT1EP04732 61 aa7.02□□□□□ -1.29
LMNB1-204ENST00000463908 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
LMNB1-204ENST00000463908 GPR98Q8WXG9 6306 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms