RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 LCA10Q71F78 164 aa7.28□□□□□ -1.24
ABCF3-204ENST00000463685 ACYP2P14621 99 aa7.24□□□□□ -1.25
ABCF3-204ENST00000463685 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
ABCF3-204ENST00000463685 KRTAP10-6P60371 365 aaPredicted RBP7.18□□□□□ -1.26
ABCF3-204ENST00000463685 CSAG1Q6PB30 78 aa7.16□□□□□ -1.26
ABCF3-204ENST00000463685 TMEM258P61165 79 aa7.15□□□□□ -1.26
ABCF3-204ENST00000463685 CHKB-CPT1BH3BT56 60 aa7.14□□□□□ -1.27
ABCF3-204ENST00000463685 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
ABCF3-204ENST00000463685 COA5Q86WW8 74 aa7.14□□□□□ -1.27
ABCF3-204ENST00000463685 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
ABCF3-204ENST00000463685 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
ABCF3-204ENST00000463685 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
ABCF3-204ENST00000463685 MT2AP02795 61 aa7.05□□□□□ -1.28
ABCF3-204ENST00000463685 SPTSSBQ8NFR3 76 aa7.02□□□□□ -1.29
ABCF3-204ENST00000463685 MT1FP04733 61 aa7.01□□□□□ -1.29
ABCF3-204ENST00000463685 KRTAP10-10P60014 251 aa6.97□□□□□ -1.29
ABCF3-204ENST00000463685 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
ABCF3-204ENST00000463685 SERP1Q9Y6X1 66 aa6.94□□□□□ -1.3
ABCF3-204ENST00000463685 H0YAA0 97 aa6.92□□□□□ -1.3
ABCF3-204ENST00000463685 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
ABCF3-204ENST00000463685 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
ABCF3-204ENST00000463685 P0C880 135 aa6.89□□□□□ -1.31
ABCF3-204ENST00000463685 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
ABCF3-204ENST00000463685 SEC61GP60059 68 aa6.77□□□□□ -1.33
ABCF3-204ENST00000463685 RPS28P62857 69 aaKnown RBP6.75□□□□□ -1.33
ABCF3-204ENST00000463685 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
ABCF3-204ENST00000463685 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
ABCF3-204ENST00000463685 A0A1B0GU69 56 aa6.74□□□□□ -1.33
ABCF3-204ENST00000463685 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
ABCF3-204ENST00000463685 LCE2BO14633 110 aa6.73□□□□□ -1.33
ABCF3-204ENST00000463685 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
ABCF3-204ENST00000463685 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.34
ABCF3-204ENST00000463685 SMIM26A0A096LP01 95 aa6.7□□□□□ -1.34
ABCF3-204ENST00000463685 M0QZ58 72 aa6.7□□□□□ -1.34
ABCF3-204ENST00000463685 R4GN34 69 aa6.69□□□□□ -1.34
ABCF3-204ENST00000463685 USH2AO75445 5202 aa6.68□□□□□ -1.34
ABCF3-204ENST00000463685 PRR15LQ9BU68 103 aa6.67□□□□□ -1.34
ABCF3-204ENST00000463685 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
ABCF3-204ENST00000463685 Q1T7F1 81 aa6.65□□□□□ -1.34
ABCF3-204ENST00000463685 A0A1B0GU33 70 aa6.64□□□□□ -1.35
ABCF3-204ENST00000463685 CRCT1Q9UGL9 99 aa6.64□□□□□ -1.35
ABCF3-204ENST00000463685 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
ABCF3-204ENST00000463685 V9GYY9 64 aa6.62□□□□□ -1.35
ABCF3-204ENST00000463685 PSPHP1O15172 72 aa6.61□□□□□ -1.35
ABCF3-204ENST00000463685 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
ABCF3-204ENST00000463685 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
ABCF3-204ENST00000463685 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
ABCF3-204ENST00000463685 MT1BP07438 61 aa6.55□□□□□ -1.36
ABCF3-204ENST00000463685 Q5VV11 94 aa6.55□□□□□ -1.36
ABCF3-204ENST00000463685 A0A0D9SG42 100 aa6.52□□□□□ -1.37
ABCF3-204ENST00000463685 SSPOA2VEC9 5147 aa6.5□□□□□ -1.37
ABCF3-204ENST00000463685 A8MU10 97 aa6.47□□□□□ -1.37
ABCF3-204ENST00000463685 UQCR11O14957 56 aa6.45□□□□□ -1.38
ABCF3-204ENST00000463685 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
ABCF3-204ENST00000463685 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
ABCF3-204ENST00000463685 A6NED7 52 aa6.38□□□□□ -1.39
ABCF3-204ENST00000463685 A6NN06 94 aa6.38□□□□□ -1.39
ABCF3-204ENST00000463685 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
ABCF3-204ENST00000463685 SPINT4Q6UDR6 99 aa6.36□□□□□ -1.39
ABCF3-204ENST00000463685 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
ABCF3-204ENST00000463685 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
ABCF3-204ENST00000463685 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
ABCF3-204ENST00000463685 MT1XP80297 61 aa6.28□□□□□ -1.4
ABCF3-204ENST00000463685 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
ABCF3-204ENST00000463685 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
ABCF3-204ENST00000463685 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
ABCF3-204ENST00000463685 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
ABCF3-204ENST00000463685 KRTAP9-7A8MTY7 169 aa6.17□□□□□ -1.42
ABCF3-204ENST00000463685 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
ABCF3-204ENST00000463685 K7ERS5 55 aa6.11□□□□□ -1.43
ABCF3-204ENST00000463685 BRK1Q8WUW1 75 aa6.08□□□□□ -1.44
ABCF3-204ENST00000463685 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
ABCF3-204ENST00000463685 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
ABCF3-204ENST00000463685 KMT2DO14686 5537 aa5.94□□□□□ -1.46
ABCF3-204ENST00000463685 MACF1Q9UPN3 7388 aaKnown RBP5.94□□□□□ -1.46
ABCF3-204ENST00000463685 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
ABCF3-204ENST00000463685 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
ABCF3-204ENST00000463685 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
ABCF3-204ENST00000463685 TNP1P09430 55 aa5.87□□□□□ -1.47
ABCF3-204ENST00000463685 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
ABCF3-204ENST00000463685 ROMO1P60602 79 aa5.85□□□□□ -1.47
ABCF3-204ENST00000463685 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
ABCF3-204ENST00000463685 KRTAP8-1Q8IUC2 63 aa5.76□□□□□ -1.49
ABCF3-204ENST00000463685 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
ABCF3-204ENST00000463685 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
ABCF3-204ENST00000463685 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
ABCF3-204ENST00000463685 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
ABCF3-204ENST00000463685 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
ABCF3-204ENST00000463685 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
ABCF3-204ENST00000463685 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
ABCF3-204ENST00000463685 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
ABCF3-204ENST00000463685 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
ABCF3-204ENST00000463685 NEBP20929 6669 aa5.58□□□□□ -1.52
ABCF3-204ENST00000463685 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
ABCF3-204ENST00000463685 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
ABCF3-204ENST00000463685 MT1EP04732 61 aa5.52□□□□□ -1.53
ABCF3-204ENST00000463685 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
ABCF3-204ENST00000463685 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
ABCF3-204ENST00000463685 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
ABCF3-204ENST00000463685 SPRR2EP22531 72 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms