RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC3-205ENST00000462715 P0C880 135 aa6.43□□□□□ -1.38
TRAPPC3-205ENST00000462715 ANAPC11Q9NYG5 84 aa6.43□□□□□ -1.38
TRAPPC3-205ENST00000462715 H0YAA0 97 aa6.42□□□□□ -1.38
TRAPPC3-205ENST00000462715 SSBP3-AS1Q7Z2R9 100 aa6.41□□□□□ -1.38
TRAPPC3-205ENST00000462715 K7ERS5 55 aa6.4□□□□□ -1.38
TRAPPC3-205ENST00000462715 MT1HL1P0DM35 61 aa6.4□□□□□ -1.39
TRAPPC3-205ENST00000462715 KRTAP10-8P60410 259 aa6.4□□□□□ -1.39
TRAPPC3-205ENST00000462715 TNXBP22105 4242 aa6.39□□□□□ -1.39
TRAPPC3-205ENST00000462715 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
TRAPPC3-205ENST00000462715 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
TRAPPC3-205ENST00000462715 A0A1B0GU33 70 aa6.36□□□□□ -1.39
TRAPPC3-205ENST00000462715 KRTAP13-2Q52LG2 175 aa6.35□□□□□ -1.39
TRAPPC3-205ENST00000462715 H1FX-AS1Q4G0G2 97 aa6.34□□□□□ -1.4
TRAPPC3-205ENST00000462715 HERC1Q15751 4861 aa6.31□□□□□ -1.4
TRAPPC3-205ENST00000462715 C20orf166-AS1Q96NR2 134 aa6.26□□□□□ -1.41
TRAPPC3-205ENST00000462715 SPINK1P00995 79 aa6.24□□□□□ -1.41
TRAPPC3-205ENST00000462715 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
TRAPPC3-205ENST00000462715 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
TRAPPC3-205ENST00000462715 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
TRAPPC3-205ENST00000462715 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
TRAPPC3-205ENST00000462715 COX6B2Q6YFQ2 88 aa6.19□□□□□ -1.42
TRAPPC3-205ENST00000462715 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.42
TRAPPC3-205ENST00000462715 NDUFAF8A1L188 74 aa6.15□□□□□ -1.42
TRAPPC3-205ENST00000462715 RPL37P61927 97 aaKnown RBP6.13□□□□□ -1.43
TRAPPC3-205ENST00000462715 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
TRAPPC3-205ENST00000462715 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
TRAPPC3-205ENST00000462715 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
TRAPPC3-205ENST00000462715 LRP2P98164 4655 aa6.02□□□□□ -1.45
TRAPPC3-205ENST00000462715 LPAP08519 4548 aa6.01□□□□□ -1.45
TRAPPC3-205ENST00000462715 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
TRAPPC3-205ENST00000462715 C9orf92A6NGG3 77 aa5.93□□□□□ -1.46
TRAPPC3-205ENST00000462715 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
TRAPPC3-205ENST00000462715 KRTAP10-6P60371 365 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC3-205ENST00000462715 XP32Q5T750 250 aa5.9□□□□□ -1.47
TRAPPC3-205ENST00000462715 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
TRAPPC3-205ENST00000462715 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
TRAPPC3-205ENST00000462715 S4R3F8 94 aa5.86□□□□□ -1.47
TRAPPC3-205ENST00000462715 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.48
TRAPPC3-205ENST00000462715 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
TRAPPC3-205ENST00000462715 KRTAP3-2Q9BYR7 98 aa5.82□□□□□ -1.48
TRAPPC3-205ENST00000462715 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
TRAPPC3-205ENST00000462715 A0A0D9SG42 100 aa5.79□□□□□ -1.48
TRAPPC3-205ENST00000462715 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
TRAPPC3-205ENST00000462715 MUC2Q02817 5179 aa5.74□□□□□ -1.49
TRAPPC3-205ENST00000462715 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
TRAPPC3-205ENST00000462715 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
TRAPPC3-205ENST00000462715 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC3-205ENST00000462715 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
TRAPPC3-205ENST00000462715 M0QZ58 72 aa5.67□□□□□ -1.5
TRAPPC3-205ENST00000462715 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
TRAPPC3-205ENST00000462715 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
TRAPPC3-205ENST00000462715 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
TRAPPC3-205ENST00000462715 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
TRAPPC3-205ENST00000462715 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
TRAPPC3-205ENST00000462715 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
TRAPPC3-205ENST00000462715 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC3-205ENST00000462715 FLGP20930 4061 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC3-205ENST00000462715 MT1HP80294 61 aa5.42□□□□□ -1.54
TRAPPC3-205ENST00000462715 M0R2T5 61 aa5.39□□□□□ -1.55
TRAPPC3-205ENST00000462715 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
TRAPPC3-205ENST00000462715 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
TRAPPC3-205ENST00000462715 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
TRAPPC3-205ENST00000462715 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC3-205ENST00000462715 R4GN34 69 aa5.25□□□□□ -1.57
TRAPPC3-205ENST00000462715 INE1O15225 51 aa5.19□□□□□ -1.58
TRAPPC3-205ENST00000462715 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
TRAPPC3-205ENST00000462715 MT2AP02795 61 aa5.12□□□□□ -1.59
TRAPPC3-205ENST00000462715 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
TRAPPC3-205ENST00000462715 KRTAP9-2Q9BYQ4 174 aa5.09□□□□□ -1.59
TRAPPC3-205ENST00000462715 MT1FP04733 61 aa5.07□□□□□ -1.6
TRAPPC3-205ENST00000462715 TNP1P09430 55 aa5.02□□□□□ -1.61
TRAPPC3-205ENST00000462715 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
TRAPPC3-205ENST00000462715 LCE2BO14633 110 aa4.9□□□□□ -1.62
TRAPPC3-205ENST00000462715 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.63
TRAPPC3-205ENST00000462715 USH2AO75445 5202 aa4.88□□□□□ -1.63
TRAPPC3-205ENST00000462715 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
TRAPPC3-205ENST00000462715 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
TRAPPC3-205ENST00000462715 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
TRAPPC3-205ENST00000462715 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
TRAPPC3-205ENST00000462715 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
TRAPPC3-205ENST00000462715 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
TRAPPC3-205ENST00000462715 MT1BP07438 61 aa4.72□□□□□ -1.65
TRAPPC3-205ENST00000462715 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
TRAPPC3-205ENST00000462715 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC3-205ENST00000462715 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
TRAPPC3-205ENST00000462715 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
TRAPPC3-205ENST00000462715 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
TRAPPC3-205ENST00000462715 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC3-205ENST00000462715 MT1XP80297 61 aa4.5□□□□□ -1.69
TRAPPC3-205ENST00000462715 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
TRAPPC3-205ENST00000462715 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
TRAPPC3-205ENST00000462715 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
TRAPPC3-205ENST00000462715 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
TRAPPC3-205ENST00000462715 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
TRAPPC3-205ENST00000462715 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
TRAPPC3-205ENST00000462715 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC3-205ENST00000462715 KMT2DO14686 5537 aa4.26□□□□□ -1.73
TRAPPC3-205ENST00000462715 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
TRAPPC3-205ENST00000462715 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms