RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 LCA10Q71F78 164 aa4.72□□□□□ -1.65
CBX3-205ENST00000462165 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
CBX3-205ENST00000462165 ATXN8Q156A1 80 aa4.71□□□□□ -1.66
CBX3-205ENST00000462165 HCG22E2RYF7 251 aa4.69□□□□□ -1.66
CBX3-205ENST00000462165 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
CBX3-205ENST00000462165 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
CBX3-205ENST00000462165 PYY3Q5JQD4 70 aa4.68□□□□□ -1.66
CBX3-205ENST00000462165 UQCR10Q9UDW1 63 aa4.67□□□□□ -1.66
CBX3-205ENST00000462165 BPY2O14599 106 aa4.66□□□□□ -1.66
CBX3-205ENST00000462165 CXCL6P80162 114 aa4.66□□□□□ -1.66
CBX3-205ENST00000462165 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
CBX3-205ENST00000462165 C1orf64Q8NEQ6 169 aa4.66□□□□□ -1.66
CBX3-205ENST00000462165 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
CBX3-205ENST00000462165 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
CBX3-205ENST00000462165 NAA38Q9BRA0 125 aaKnown RBP4.62□□□□□ -1.67
CBX3-205ENST00000462165 Q8N9L7 120 aa4.61□□□□□ -1.67
CBX3-205ENST00000462165 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
CBX3-205ENST00000462165 PRO2289Q9P1D8 64 aa4.58□□□□□ -1.68
CBX3-205ENST00000462165 SPRR2DP22532 72 aa4.57□□□□□ -1.68
CBX3-205ENST00000462165 MT1XP80297 61 aa4.56□□□□□ -1.68
CBX3-205ENST00000462165 H3BT86 120 aa4.53□□□□□ -1.68
CBX3-205ENST00000462165 M0R143 59 aa4.53□□□□□ -1.68
CBX3-205ENST00000462165 A0A087WVE0 104 aa4.52□□□□□ -1.69
CBX3-205ENST00000462165 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
CBX3-205ENST00000462165 H0YAA0 97 aa4.5□□□□□ -1.69
CBX3-205ENST00000462165 TP53AIP1Q9HCN2 124 aa4.49□□□□□ -1.69
CBX3-205ENST00000462165 A8MUN3 132 aa4.48□□□□□ -1.69
CBX3-205ENST00000462165 TSTD3H0UI37 97 aa4.47□□□□□ -1.69
CBX3-205ENST00000462165 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
CBX3-205ENST00000462165 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.7
CBX3-205ENST00000462165 PCP4P48539 62 aa4.45□□□□□ -1.7
CBX3-205ENST00000462165 UBL5Q9BZL1 73 aa4.43□□□□□ -1.7
CBX3-205ENST00000462165 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
CBX3-205ENST00000462165 NDUFC1O43677 76 aa4.42□□□□□ -1.7
CBX3-205ENST00000462165 ADM2Q7Z4H4 148 aa4.42□□□□□ -1.7
CBX3-205ENST00000462165 A0A1W2PPM0 123 aa4.38□□□□□ -1.71
CBX3-205ENST00000462165 LOC101927531A0A1B0GV80 90 aa4.36□□□□□ -1.71
CBX3-205ENST00000462165 K7EP34 96 aa4.36□□□□□ -1.71
CBX3-205ENST00000462165 BATFQ16520 125 aa4.36□□□□□ -1.71
CBX3-205ENST00000462165 TRAV22A0A0B4J277 110 aa4.35□□□□□ -1.71
CBX3-205ENST00000462165 TAX1BP3O14907 124 aa4.34□□□□□ -1.71
CBX3-205ENST00000462165 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
CBX3-205ENST00000462165 R4GN34 69 aa4.34□□□□□ -1.71
CBX3-205ENST00000462165 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
CBX3-205ENST00000462165 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
CBX3-205ENST00000462165 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
CBX3-205ENST00000462165 ACYP1P07311 99 aa4.3□□□□□ -1.72
CBX3-205ENST00000462165 M0QZ58 72 aa4.29□□□□□ -1.72
CBX3-205ENST00000462165 SPCS1Q9Y6A9 102 aa4.29□□□□□ -1.72
CBX3-205ENST00000462165 P0C880 135 aa4.28□□□□□ -1.72
CBX3-205ENST00000462165 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
CBX3-205ENST00000462165 C20orf197Q8N268 126 aa4.27□□□□□ -1.73
CBX3-205ENST00000462165 PRO0461Q9UI25 63 aa4.25□□□□□ -1.73
CBX3-205ENST00000462165 ATOX1O00244 68 aa4.24□□□□□ -1.73
CBX3-205ENST00000462165 SMIM6P0DI80 62 aa4.24□□□□□ -1.73
CBX3-205ENST00000462165 H0Y9P7 68 aa4.23□□□□□ -1.73
CBX3-205ENST00000462165 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
CBX3-205ENST00000462165 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
CBX3-205ENST00000462165 UQCRQO14949 82 aa4.22□□□□□ -1.73
CBX3-205ENST00000462165 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
CBX3-205ENST00000462165 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
CBX3-205ENST00000462165 ETDBQ3ZM63 59 aa4.1□□□□□ -1.75
CBX3-205ENST00000462165 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
CBX3-205ENST00000462165 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
CBX3-205ENST00000462165 PCP4L1A6NKN8 68 aa4.08□□□□□ -1.76
CBX3-205ENST00000462165 MT-ATP8P03928 68 aa4.08□□□□□ -1.76
CBX3-205ENST00000462165 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
CBX3-205ENST00000462165 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
CBX3-205ENST00000462165 F8W1H4 67 aa4.07□□□□□ -1.76
CBX3-205ENST00000462165 COL5A1-AS1Q5SY13 56 aa4.07□□□□□ -1.76
CBX3-205ENST00000462165 ATP5EP2Q5VTU8 51 aa4.07□□□□□ -1.76
CBX3-205ENST00000462165 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
CBX3-205ENST00000462165 MT1EP04732 61 aa4.05□□□□□ -1.76
CBX3-205ENST00000462165 MP68P56378 58 aa4.05□□□□□ -1.76
CBX3-205ENST00000462165 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
CBX3-205ENST00000462165 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
CBX3-205ENST00000462165 MT4P47944 62 aa4.01□□□□□ -1.77
CBX3-205ENST00000462165 OCR1Q9BZK8 76 aa4.01□□□□□ -1.77
CBX3-205ENST00000462165 FAM240AA0A1B0GVK7 77 aa3.99□□□□□ -1.77
CBX3-205ENST00000462165 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
CBX3-205ENST00000462165 H3BPC8 53 aa3.97□□□□□ -1.77
CBX3-205ENST00000462165 MT1GP13640 62 aa3.97□□□□□ -1.77
CBX3-205ENST00000462165 TRAV7A0A075B6U4 112 aa3.96□□□□□ -1.78
CBX3-205ENST00000462165 SEC61GP60059 68 aa3.96□□□□□ -1.78
CBX3-205ENST00000462165 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
CBX3-205ENST00000462165 LOC105371267A0A1B0GV96 52 aa3.93□□□□□ -1.78
CBX3-205ENST00000462165 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
CBX3-205ENST00000462165 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
CBX3-205ENST00000462165 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
CBX3-205ENST00000462165 LINC00643Q86TS7 51 aa3.91□□□□□ -1.78
CBX3-205ENST00000462165 SPTSSBQ8NFR3 76 aa3.91□□□□□ -1.78
CBX3-205ENST00000462165 ACYP2P14621 99 aa3.9□□□□□ -1.79
CBX3-205ENST00000462165 MT1MQ8N339 61 aa3.89□□□□□ -1.79
CBX3-205ENST00000462165 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
CBX3-205ENST00000462165 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
CBX3-205ENST00000462165 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
CBX3-205ENST00000462165 A0A0D9SG42 100 aa3.85□□□□□ -1.79
CBX3-205ENST00000462165 MT1LQ93083 61 aa3.82□□□□□ -1.8
CBX3-205ENST00000462165 CHKB-CPT1BH3BT56 60 aa3.8□□□□□ -1.8
CBX3-205ENST00000462165 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms