RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 Q96NJ1 140 aa3.37□□□□□ -1.87
CLK1-207ENST00000461981 H0YAA0 97 aa3.36□□□□□ -1.87
CLK1-207ENST00000461981 CHTF8P0CG12 524 aa3.35□□□□□ -1.87
CLK1-207ENST00000461981 PANO1I0J062 215 aa3.35□□□□□ -1.87
CLK1-207ENST00000461981 IGLV9-49A0A0B4J1Y8 123 aa3.34□□□□□ -1.87
CLK1-207ENST00000461981 KRTAP11-1Q8IUC1 163 aa3.34□□□□□ -1.87
CLK1-207ENST00000461981 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
CLK1-207ENST00000461981 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.33□□□□□ -1.88
CLK1-207ENST00000461981 DMBT1Q9UGM3 2413 aaPredicted RBP3.32□□□□□ -1.88
CLK1-207ENST00000461981 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
CLK1-207ENST00000461981 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
CLK1-207ENST00000461981 TNXBP22105 4242 aa3.32□□□□□ -1.88
CLK1-207ENST00000461981 K7ERS5 55 aa3.31□□□□□ -1.88
CLK1-207ENST00000461981 HERC1Q15751 4861 aa3.31□□□□□ -1.88
CLK1-207ENST00000461981 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
CLK1-207ENST00000461981 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
CLK1-207ENST00000461981 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
CLK1-207ENST00000461981 IGKV2D-30A0A075B6S6 120 aa3.27□□□□□ -1.89
CLK1-207ENST00000461981 IGKV2-30P06310 120 aa3.27□□□□□ -1.89
CLK1-207ENST00000461981 SPRR1BP22528 89 aa3.27□□□□□ -1.89
CLK1-207ENST00000461981 A0A1B0GU33 70 aa3.26□□□□□ -1.89
CLK1-207ENST00000461981 TYMSOSQ8TAI1 123 aa3.26□□□□□ -1.89
CLK1-207ENST00000461981 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
CLK1-207ENST00000461981 SEC61BP60468 96 aaKnown RBP3.24□□□□□ -1.89
CLK1-207ENST00000461981 LCE2AQ5TA79 106 aaPredicted RBP3.24□□□□□ -1.89
CLK1-207ENST00000461981 RPS29P62273 56 aaKnown RBP3.24□□□□□ -1.89
CLK1-207ENST00000461981 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
CLK1-207ENST00000461981 ANAPC11Q9NYG5 84 aa3.22□□□□□ -1.89
CLK1-207ENST00000461981 KRTAP1-4P0C5Y4 121 aa3.21□□□□□ -1.9
CLK1-207ENST00000461981 H1FX-AS1Q4G0G2 97 aa3.21□□□□□ -1.9
CLK1-207ENST00000461981 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
CLK1-207ENST00000461981 A0A0D9SG42 100 aa3.16□□□□□ -1.9
CLK1-207ENST00000461981 KRTAP3-3Q9BYR6 98 aa3.15□□□□□ -1.9
CLK1-207ENST00000461981 KRTAP3-2Q9BYR7 98 aa3.15□□□□□ -1.9
CLK1-207ENST00000461981 COX6B2Q6YFQ2 88 aa3.14□□□□□ -1.91
CLK1-207ENST00000461981 RPL37P61927 97 aaKnown RBP3.12□□□□□ -1.91
CLK1-207ENST00000461981 UBR4Q5T4S7 5183 aa3.1□□□□□ -1.91
CLK1-207ENST00000461981 LRP1Q07954 4544 aaKnown RBP3.1□□□□□ -1.91
CLK1-207ENST00000461981 XP32Q5T750 250 aa3.09□□□□□ -1.91
CLK1-207ENST00000461981 RNF213Q63HN8 5207 aa3.07□□□□□ -1.92
CLK1-207ENST00000461981 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
CLK1-207ENST00000461981 KRTAP13-4Q3LI77 160 aa3.05□□□□□ -1.92
CLK1-207ENST00000461981 CRCT1Q9UGL9 99 aa3.04□□□□□ -1.92
CLK1-207ENST00000461981 KRTAP3-1Q9BYR8 98 aa3.01□□□□□ -1.93
CLK1-207ENST00000461981 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
CLK1-207ENST00000461981 S4R3F8 94 aa3.01□□□□□ -1.93
CLK1-207ENST00000461981 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
CLK1-207ENST00000461981 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
CLK1-207ENST00000461981 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
CLK1-207ENST00000461981 LCE2CQ5TA81 110 aa2.96□□□□□ -1.94
CLK1-207ENST00000461981 CAMK2N1Q7Z7J9 78 aa2.96□□□□□ -1.94
CLK1-207ENST00000461981 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
CLK1-207ENST00000461981 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
CLK1-207ENST00000461981 LRP2P98164 4655 aa2.95□□□□□ -1.94
CLK1-207ENST00000461981 LORP23490 312 aaPredicted RBP2.95□□□□□ -1.94
CLK1-207ENST00000461981 MT1HP80294 61 aa2.93□□□□□ -1.94
CLK1-207ENST00000461981 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
CLK1-207ENST00000461981 KRTAP4-1Q9BYQ7 146 aa2.89□□□□□ -1.95
CLK1-207ENST00000461981 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
CLK1-207ENST00000461981 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
CLK1-207ENST00000461981 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.84□□□□□ -1.95
CLK1-207ENST00000461981 R4GN34 69 aa2.83□□□□□ -1.96
CLK1-207ENST00000461981 MUC2Q02817 5179 aa2.82□□□□□ -1.96
CLK1-207ENST00000461981 LPAP08519 4548 aa2.82□□□□□ -1.96
CLK1-207ENST00000461981 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
CLK1-207ENST00000461981 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
CLK1-207ENST00000461981 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
CLK1-207ENST00000461981 M0R2T5 61 aa2.74□□□□□ -1.97
CLK1-207ENST00000461981 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
CLK1-207ENST00000461981 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
CLK1-207ENST00000461981 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.98
CLK1-207ENST00000461981 M0QZ58 72 aa2.7□□□□□ -1.98
CLK1-207ENST00000461981 MT2AP02795 61 aa2.7□□□□□ -1.98
CLK1-207ENST00000461981 KRTAP19-1Q8IUB9 90 aa2.69□□□□□ -1.98
CLK1-207ENST00000461981 LCE2BO14633 110 aa2.67□□□□□ -1.98
CLK1-207ENST00000461981 INE1O15225 51 aa2.67□□□□□ -1.98
CLK1-207ENST00000461981 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
CLK1-207ENST00000461981 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
CLK1-207ENST00000461981 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
CLK1-207ENST00000461981 MT1FP04733 61 aa2.63□□□□□ -1.99
CLK1-207ENST00000461981 KRTAP10-10P60014 251 aa2.59□□□□□ -1.99
CLK1-207ENST00000461981 KRTAP5-9P26371 169 aa2.56□□□□□ -2
CLK1-207ENST00000461981 LOC100996750A0A140TA64 210 aa2.55□□□□□ -2
CLK1-207ENST00000461981 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
CLK1-207ENST00000461981 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
CLK1-207ENST00000461981 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
CLK1-207ENST00000461981 USH2AO75445 5202 aa2.51□□□□□ -2.01
CLK1-207ENST00000461981 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
CLK1-207ENST00000461981 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
CLK1-207ENST00000461981 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
CLK1-207ENST00000461981 SPRR2GQ9BYE4 73 aa2.49□□□□□ -2.01
CLK1-207ENST00000461981 KRTAP23-1A1A580 65 aa2.49□□□□□ -2.01
CLK1-207ENST00000461981 TNP1P09430 55 aa2.48□□□□□ -2.01
CLK1-207ENST00000461981 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
CLK1-207ENST00000461981 NEBP20929 6669 aa2.43□□□□□ -2.02
CLK1-207ENST00000461981 MT1BP07438 61 aa2.43□□□□□ -2.02
CLK1-207ENST00000461981 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
CLK1-207ENST00000461981 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
CLK1-207ENST00000461981 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
CLK1-207ENST00000461981 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms