RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 FAM236CP0DP71 79 aa5.62□□□□□ -1.51
SSBP1-202ENST00000461433 H0Y9P7 68 aa5.59□□□□□ -1.51
SSBP1-202ENST00000461433 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
SSBP1-202ENST00000461433 SERP2Q8N6R1 65 aa5.59□□□□□ -1.52
SSBP1-202ENST00000461433 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
SSBP1-202ENST00000461433 C4orf26Q17RF5 130 aa5.58□□□□□ -1.52
SSBP1-202ENST00000461433 LOC101927531A0A1B0GV80 90 aa5.57□□□□□ -1.52
SSBP1-202ENST00000461433 TMEM258P61165 79 aa5.57□□□□□ -1.52
SSBP1-202ENST00000461433 M0R2T5 61 aa5.55□□□□□ -1.52
SSBP1-202ENST00000461433 C5orf47Q569G3 176 aa5.55□□□□□ -1.52
SSBP1-202ENST00000461433 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
SSBP1-202ENST00000461433 C1orf64Q8NEQ6 169 aa5.54□□□□□ -1.52
SSBP1-202ENST00000461433 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-202ENST00000461433 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
SSBP1-202ENST00000461433 H1FX-AS1Q4G0G2 97 aa5.53□□□□□ -1.52
SSBP1-202ENST00000461433 MP68P56378 58 aa5.52□□□□□ -1.53
SSBP1-202ENST00000461433 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
SSBP1-202ENST00000461433 H3BPC8 53 aa5.5□□□□□ -1.53
SSBP1-202ENST00000461433 KLKP1Q107X0 134 aa5.5□□□□□ -1.53
SSBP1-202ENST00000461433 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
SSBP1-202ENST00000461433 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
SSBP1-202ENST00000461433 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
SSBP1-202ENST00000461433 NDUFC1O43677 76 aa5.41□□□□□ -1.54
SSBP1-202ENST00000461433 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
SSBP1-202ENST00000461433 ATP5EP56381 51 aaPredicted RBP5.4□□□□□ -1.54
SSBP1-202ENST00000461433 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
SSBP1-202ENST00000461433 LCA10Q71F78 164 aa5.39□□□□□ -1.55
SSBP1-202ENST00000461433 S4R3F8 94 aa5.39□□□□□ -1.55
SSBP1-202ENST00000461433 MT2AP02795 61 aa5.38□□□□□ -1.55
SSBP1-202ENST00000461433 SNURFQ9Y675 71 aa5.37□□□□□ -1.55
SSBP1-202ENST00000461433 A8MUN3 132 aa5.36□□□□□ -1.55
SSBP1-202ENST00000461433 H7BZZ5 65 aa5.36□□□□□ -1.55
SSBP1-202ENST00000461433 MT1FP04733 61 aa5.34□□□□□ -1.55
SSBP1-202ENST00000461433 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.56
SSBP1-202ENST00000461433 DMAC1Q96GE9 116 aa5.33□□□□□ -1.56
SSBP1-202ENST00000461433 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
SSBP1-202ENST00000461433 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
SSBP1-202ENST00000461433 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
SSBP1-202ENST00000461433 CRCT1Q9UGL9 99 aa5.27□□□□□ -1.57
SSBP1-202ENST00000461433 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
SSBP1-202ENST00000461433 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
SSBP1-202ENST00000461433 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
SSBP1-202ENST00000461433 ACYP2P14621 99 aa5.23□□□□□ -1.57
SSBP1-202ENST00000461433 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.57
SSBP1-202ENST00000461433 H0YAA0 97 aa5.17□□□□□ -1.58
SSBP1-202ENST00000461433 BRK1Q8WUW1 75 aa5.13□□□□□ -1.59
SSBP1-202ENST00000461433 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
SSBP1-202ENST00000461433 CHKB-CPT1BH3BT56 60 aa5.11□□□□□ -1.59
SSBP1-202ENST00000461433 V9GYY9 64 aa5.11□□□□□ -1.59
SSBP1-202ENST00000461433 Q1T7F1 81 aa5.1□□□□□ -1.59
SSBP1-202ENST00000461433 USH2AO75445 5202 aa5.09□□□□□ -1.59
SSBP1-202ENST00000461433 COA5Q86WW8 74 aa5.09□□□□□ -1.59
SSBP1-202ENST00000461433 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
SSBP1-202ENST00000461433 SPTSSBQ8NFR3 76 aa5.08□□□□□ -1.6
SSBP1-202ENST00000461433 P0C880 135 aa5.06□□□□□ -1.6
SSBP1-202ENST00000461433 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
SSBP1-202ENST00000461433 H3BS24 57 aa5.02□□□□□ -1.61
SSBP1-202ENST00000461433 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
SSBP1-202ENST00000461433 SSPOA2VEC9 5147 aa5□□□□□ -1.61
SSBP1-202ENST00000461433 MT1BP07438 61 aa4.99□□□□□ -1.61
SSBP1-202ENST00000461433 PSPHP1O15172 72 aa4.97□□□□□ -1.61
SSBP1-202ENST00000461433 Q5VV11 94 aa4.95□□□□□ -1.62
SSBP1-202ENST00000461433 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
SSBP1-202ENST00000461433 R4GN34 69 aa4.94□□□□□ -1.62
SSBP1-202ENST00000461433 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
SSBP1-202ENST00000461433 M0QZ58 72 aa4.92□□□□□ -1.62
SSBP1-202ENST00000461433 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
SSBP1-202ENST00000461433 SEC61GP60059 68 aa4.88□□□□□ -1.63
SSBP1-202ENST00000461433 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
SSBP1-202ENST00000461433 A6NED7 52 aa4.86□□□□□ -1.63
SSBP1-202ENST00000461433 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
SSBP1-202ENST00000461433 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
SSBP1-202ENST00000461433 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
SSBP1-202ENST00000461433 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
SSBP1-202ENST00000461433 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
SSBP1-202ENST00000461433 A0A1B0GU69 56 aa4.8□□□□□ -1.64
SSBP1-202ENST00000461433 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
SSBP1-202ENST00000461433 KRTAP10-5P60370 271 aa4.8□□□□□ -1.64
SSBP1-202ENST00000461433 A0A1B0GU33 70 aa4.78□□□□□ -1.64
SSBP1-202ENST00000461433 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
SSBP1-202ENST00000461433 A6NN06 94 aa4.77□□□□□ -1.65
SSBP1-202ENST00000461433 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
SSBP1-202ENST00000461433 A8MU10 97 aa4.73□□□□□ -1.65
SSBP1-202ENST00000461433 MT1XP80297 61 aa4.73□□□□□ -1.65
SSBP1-202ENST00000461433 A0A0D9SG42 100 aa4.68□□□□□ -1.66
SSBP1-202ENST00000461433 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
SSBP1-202ENST00000461433 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
SSBP1-202ENST00000461433 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
SSBP1-202ENST00000461433 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
SSBP1-202ENST00000461433 UQCR11O14957 56 aa4.61□□□□□ -1.67
SSBP1-202ENST00000461433 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
SSBP1-202ENST00000461433 SPINT4Q6UDR6 99 aa4.59□□□□□ -1.67
SSBP1-202ENST00000461433 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
SSBP1-202ENST00000461433 CAMK2N1Q7Z7J9 78 aa4.57□□□□□ -1.68
SSBP1-202ENST00000461433 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
SSBP1-202ENST00000461433 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
SSBP1-202ENST00000461433 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
SSBP1-202ENST00000461433 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
SSBP1-202ENST00000461433 KMT2DO14686 5537 aa4.45□□□□□ -1.7
SSBP1-202ENST00000461433 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms