RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 CMYA5Q8N3K9 4069 aa3.14□□□□□ -1.91
CLSTN2-201ENST00000458420 DNAH3Q8TD57 4116 aa3.12□□□□□ -1.91
CLSTN2-201ENST00000458420 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
CLSTN2-201ENST00000458420 LYSTQ99698 3801 aa3.12□□□□□ -1.91
CLSTN2-201ENST00000458420 DNAH7Q8WXX0 4024 aa3.11□□□□□ -1.91
CLSTN2-201ENST00000458420 ZNF469Q96JG9 3925 aaPredicted RBP3.09□□□□□ -1.91
CLSTN2-201ENST00000458420 MT1HL1P0DM35 61 aa3.09□□□□□ -1.91
CLSTN2-201ENST00000458420 KRTAP3-1Q9BYR8 98 aa3.09□□□□□ -1.91
CLSTN2-201ENST00000458420 DNAH10Q8IVF4 4471 aa3.09□□□□□ -1.91
CLSTN2-201ENST00000458420 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
CLSTN2-201ENST00000458420 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.92
CLSTN2-201ENST00000458420 ANK2Q01484 3957 aa3.08□□□□□ -1.92
CLSTN2-201ENST00000458420 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
CLSTN2-201ENST00000458420 KMT2AQ03164 3969 aa3.05□□□□□ -1.92
CLSTN2-201ENST00000458420 DNAH17Q9UFH2 4485 aa3.05□□□□□ -1.92
CLSTN2-201ENST00000458420 VPS13DQ5THJ4 4388 aa3.03□□□□□ -1.92
CLSTN2-201ENST00000458420 PLECQ15149 4684 aaKnown RBP3.02□□□□□ -1.93
CLSTN2-201ENST00000458420 PRKDCP78527 4128 aaKnown RBP3.02□□□□□ -1.93
CLSTN2-201ENST00000458420 FAT2Q9NYQ8 4349 aa3.02□□□□□ -1.93
CLSTN2-201ENST00000458420 DNAH11Q96DT5 4516 aa3.01□□□□□ -1.93
CLSTN2-201ENST00000458420 DNAH6Q9C0G6 4158 aa2.98□□□□□ -1.93
CLSTN2-201ENST00000458420 SPRR2EP22531 72 aa2.97□□□□□ -1.93
CLSTN2-201ENST00000458420 SPRR2BP35325 72 aa2.97□□□□□ -1.93
CLSTN2-201ENST00000458420 SPRR2AP35326 72 aa2.97□□□□□ -1.93
CLSTN2-201ENST00000458420 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
CLSTN2-201ENST00000458420 DNAH8Q96JB1 4490 aa2.96□□□□□ -1.93
CLSTN2-201ENST00000458420 INE1O15225 51 aa2.92□□□□□ -1.94
CLSTN2-201ENST00000458420 DNAH5Q8TE73 4624 aa2.91□□□□□ -1.94
CLSTN2-201ENST00000458420 MT1HP80294 61 aa2.88□□□□□ -1.95
CLSTN2-201ENST00000458420 FAT1Q14517 4588 aa2.88□□□□□ -1.95
CLSTN2-201ENST00000458420 DYNC2H1Q8NCM8 4307 aaKnown RBP2.88□□□□□ -1.95
CLSTN2-201ENST00000458420 LRP1BQ9NZR2 4599 aa2.88□□□□□ -1.95
CLSTN2-201ENST00000458420 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
CLSTN2-201ENST00000458420 HECTD4Q9Y4D8 3996 aa2.87□□□□□ -1.95
CLSTN2-201ENST00000458420 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
CLSTN2-201ENST00000458420 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
CLSTN2-201ENST00000458420 SPRR2DP22532 72 aa2.86□□□□□ -1.95
CLSTN2-201ENST00000458420 KRTAP3-3Q9BYR6 98 aa2.86□□□□□ -1.95
CLSTN2-201ENST00000458420 STARD9Q9P2P6 4700 aa2.83□□□□□ -1.96
CLSTN2-201ENST00000458420 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CLSTN2-201ENST00000458420 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
CLSTN2-201ENST00000458420 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
CLSTN2-201ENST00000458420 KRTAP3-2Q9BYR7 98 aa2.82□□□□□ -1.96
CLSTN2-201ENST00000458420 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
CLSTN2-201ENST00000458420 KRTAP4-1Q9BYQ7 146 aa2.78□□□□□ -1.96
CLSTN2-201ENST00000458420 KRTAP19-5Q3LI72 72 aa2.78□□□□□ -1.96
CLSTN2-201ENST00000458420 LCE3BQ5TA77 95 aa2.77□□□□□ -1.97
CLSTN2-201ENST00000458420 PKHD1P08F94 4074 aa2.77□□□□□ -1.97
CLSTN2-201ENST00000458420 KRTAP23-1A1A580 65 aa2.76□□□□□ -1.97
CLSTN2-201ENST00000458420 PKD1P98161 4303 aa2.76□□□□□ -1.97
CLSTN2-201ENST00000458420 LCE2BO14633 110 aa2.75□□□□□ -1.97
CLSTN2-201ENST00000458420 DYNC1H1Q14204 4646 aaKnown RBP2.73□□□□□ -1.97
CLSTN2-201ENST00000458420 MT2AP02795 61 aa2.71□□□□□ -1.98
CLSTN2-201ENST00000458420 MT1FP04733 61 aa2.7□□□□□ -1.98
CLSTN2-201ENST00000458420 HSPG2P98160 4391 aa2.69□□□□□ -1.98
CLSTN2-201ENST00000458420 LCE2CQ5TA81 110 aa2.67□□□□□ -1.98
CLSTN2-201ENST00000458420 MT4P47944 62 aa2.66□□□□□ -1.98
CLSTN2-201ENST00000458420 MT1GP13640 62 aa2.66□□□□□ -1.98
CLSTN2-201ENST00000458420 LPAP08519 4548 aa2.66□□□□□ -1.98
CLSTN2-201ENST00000458420 DNHD1Q96M86 4753 aa2.66□□□□□ -1.98
CLSTN2-201ENST00000458420 LCE2DQ5TA82 110 aaPredicted RBP2.66□□□□□ -1.98
CLSTN2-201ENST00000458420 KRTAP12-4P60329 112 aa2.65□□□□□ -1.98
CLSTN2-201ENST00000458420 KRTAP17-1Q9BYP8 105 aa2.65□□□□□ -1.99
CLSTN2-201ENST00000458420 RYR1P21817 5038 aa2.65□□□□□ -1.99
CLSTN2-201ENST00000458420 TNXBP22105 4242 aa2.64□□□□□ -1.99
CLSTN2-201ENST00000458420 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
CLSTN2-201ENST00000458420 RYR3Q15413 4870 aa2.6□□□□□ -1.99
CLSTN2-201ENST00000458420 MYCBP2O75592 4640 aa2.58□□□□□ -2
CLSTN2-201ENST00000458420 KRTAP19-1Q8IUB9 90 aa2.58□□□□□ -2
CLSTN2-201ENST00000458420 KRTAP4-8A0A0G2JLE6 195 aa2.55□□□□□ -2
CLSTN2-201ENST00000458420 KRTAP4-8Q9BYQ9 185 aa2.55□□□□□ -2
CLSTN2-201ENST00000458420 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
CLSTN2-201ENST00000458420 LRP1Q07954 4544 aaKnown RBP2.53□□□□□ -2
CLSTN2-201ENST00000458420 KRTAP9-2Q9BYQ4 174 aa2.53□□□□□ -2.01
CLSTN2-201ENST00000458420 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
CLSTN2-201ENST00000458420 KRTAP19-4Q3LI73 84 aa2.46□□□□□ -2.01
CLSTN2-201ENST00000458420 LCE1DQ5T752 114 aa2.46□□□□□ -2.02
CLSTN2-201ENST00000458420 HYDINQ4G0P3 5121 aa2.46□□□□□ -2.02
CLSTN2-201ENST00000458420 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
CLSTN2-201ENST00000458420 KRTAP9-6A0A140TA67 174 aa2.42□□□□□ -2.02
CLSTN2-201ENST00000458420 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
CLSTN2-201ENST00000458420 LCE5AQ5TCM9 118 aa2.39□□□□□ -2.03
CLSTN2-201ENST00000458420 LRP2P98164 4655 aa2.38□□□□□ -2.03
CLSTN2-201ENST00000458420 MT3P25713 68 aa2.37□□□□□ -2.03
CLSTN2-201ENST00000458420 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
CLSTN2-201ENST00000458420 KRTAP4-7Q9BYR0 210 aa2.36□□□□□ -2.03
CLSTN2-201ENST00000458420 MT1XP80297 61 aa2.36□□□□□ -2.03
CLSTN2-201ENST00000458420 HERC2O95714 4834 aa2.34□□□□□ -2.04
CLSTN2-201ENST00000458420 KRTAP9-8Q9BYQ0 159 aa2.31□□□□□ -2.04
CLSTN2-201ENST00000458420 LOC100996750A0A140TA64 210 aa2.3□□□□□ -2.04
CLSTN2-201ENST00000458420 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
CLSTN2-201ENST00000458420 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
CLSTN2-201ENST00000458420 KRTAP4-9Q9BYQ8 210 aa2.3□□□□□ -2.04
CLSTN2-201ENST00000458420 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
CLSTN2-201ENST00000458420 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
CLSTN2-201ENST00000458420 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
CLSTN2-201ENST00000458420 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
CLSTN2-201ENST00000458420 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
CLSTN2-201ENST00000458420 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
CLSTN2-201ENST00000458420 LCE1AQ5T7P2 110 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms