RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 HSPG2P98160 4391 aa3.86□□□□□ -1.79
CUBNP3-201ENST00000457461 COX6B2Q6YFQ2 88 aa3.85□□□□□ -1.79
CUBNP3-201ENST00000457461 SSBP3-AS1Q7Z2R9 100 aa3.85□□□□□ -1.79
CUBNP3-201ENST00000457461 KRTAP3-1Q9BYR8 98 aa3.85□□□□□ -1.79
CUBNP3-201ENST00000457461 H0YAA0 97 aa3.84□□□□□ -1.79
CUBNP3-201ENST00000457461 A0A0G2JQZ4 141 aa3.83□□□□□ -1.8
CUBNP3-201ENST00000457461 KRTAP10-4P60372 401 aaPredicted RBP3.82□□□□□ -1.8
CUBNP3-201ENST00000457461 RYR1P21817 5038 aa3.81□□□□□ -1.8
CUBNP3-201ENST00000457461 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
CUBNP3-201ENST00000457461 IGKV2-30P06310 120 aa3.79□□□□□ -1.8
CUBNP3-201ENST00000457461 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
CUBNP3-201ENST00000457461 A0A1B0GU33 70 aa3.79□□□□□ -1.8
CUBNP3-201ENST00000457461 SPINK6Q6UWN8 80 aa3.79□□□□□ -1.8
CUBNP3-201ENST00000457461 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
CUBNP3-201ENST00000457461 IGKV2D-30A0A075B6S6 120 aa3.77□□□□□ -1.81
CUBNP3-201ENST00000457461 SMR3BP02814 79 aaPredicted RBP3.77□□□□□ -1.81
CUBNP3-201ENST00000457461 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
CUBNP3-201ENST00000457461 TPRXLQ17RH7 258 aa3.76□□□□□ -1.81
CUBNP3-201ENST00000457461 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
CUBNP3-201ENST00000457461 KIAA1109Q2LD37 5005 aa3.75□□□□□ -1.81
CUBNP3-201ENST00000457461 KRTAP4-8Q9BYQ9 185 aa3.75□□□□□ -1.81
CUBNP3-201ENST00000457461 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
CUBNP3-201ENST00000457461 TNXBP22105 4242 aa3.73□□□□□ -1.81
CUBNP3-201ENST00000457461 KRTAP17-1Q9BYP8 105 aa3.72□□□□□ -1.81
CUBNP3-201ENST00000457461 CRIPTQ9P021 101 aa3.72□□□□□ -1.81
CUBNP3-201ENST00000457461 FAT3Q8TDW7 4589 aa3.72□□□□□ -1.81
CUBNP3-201ENST00000457461 Q5VSD8 79 aa3.71□□□□□ -1.82
CUBNP3-201ENST00000457461 LRP1Q07954 4544 aaKnown RBP3.7□□□□□ -1.82
CUBNP3-201ENST00000457461 TYMSOSQ8TAI1 123 aa3.69□□□□□ -1.82
CUBNP3-201ENST00000457461 RPS29P62273 56 aaKnown RBP3.68□□□□□ -1.82
CUBNP3-201ENST00000457461 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
CUBNP3-201ENST00000457461 Q8N1X5 172 aa3.68□□□□□ -1.82
CUBNP3-201ENST00000457461 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
CUBNP3-201ENST00000457461 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
CUBNP3-201ENST00000457461 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
CUBNP3-201ENST00000457461 SPINK1P00995 79 aa3.67□□□□□ -1.82
CUBNP3-201ENST00000457461 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
CUBNP3-201ENST00000457461 FLG2Q5D862 2391 aaPredicted RBP3.67□□□□□ -1.82
CUBNP3-201ENST00000457461 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
CUBNP3-201ENST00000457461 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
CUBNP3-201ENST00000457461 BIRC6Q9NR09 4857 aa3.66□□□□□ -1.82
CUBNP3-201ENST00000457461 KRTAP10-8P60410 259 aa3.65□□□□□ -1.83
CUBNP3-201ENST00000457461 MYCBP2O75592 4640 aa3.65□□□□□ -1.83
CUBNP3-201ENST00000457461 PLAC4Q8WY50 150 aa3.63□□□□□ -1.83
CUBNP3-201ENST00000457461 HERC2O95714 4834 aa3.63□□□□□ -1.83
CUBNP3-201ENST00000457461 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
CUBNP3-201ENST00000457461 DMBT1Q9UGM3 2413 aaPredicted RBP3.61□□□□□ -1.83
CUBNP3-201ENST00000457461 MT1HL1P0DM35 61 aa3.61□□□□□ -1.83
CUBNP3-201ENST00000457461 KRTAP4-5Q9BYR2 181 aa3.59□□□□□ -1.83
CUBNP3-201ENST00000457461 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
CUBNP3-201ENST00000457461 INE1O15225 51 aa3.53□□□□□ -1.84
CUBNP3-201ENST00000457461 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
CUBNP3-201ENST00000457461 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
CUBNP3-201ENST00000457461 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
CUBNP3-201ENST00000457461 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
CUBNP3-201ENST00000457461 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
CUBNP3-201ENST00000457461 PCLOQ9Y6V0 5065 aa3.46□□□□□ -1.86
CUBNP3-201ENST00000457461 R4GN34 69 aa3.46□□□□□ -1.86
CUBNP3-201ENST00000457461 S4R3F8 94 aa3.45□□□□□ -1.86
CUBNP3-201ENST00000457461 LRP2P98164 4655 aa3.42□□□□□ -1.86
CUBNP3-201ENST00000457461 LPAP08519 4548 aa3.41□□□□□ -1.86
CUBNP3-201ENST00000457461 KRTAP12-2P59991 146 aa3.4□□□□□ -1.86
CUBNP3-201ENST00000457461 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
CUBNP3-201ENST00000457461 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
CUBNP3-201ENST00000457461 HERC1Q15751 4861 aa3.37□□□□□ -1.87
CUBNP3-201ENST00000457461 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
CUBNP3-201ENST00000457461 KRTAP4-8A0A0G2JLE6 195 aa3.37□□□□□ -1.87
CUBNP3-201ENST00000457461 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
CUBNP3-201ENST00000457461 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
CUBNP3-201ENST00000457461 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
CUBNP3-201ENST00000457461 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
CUBNP3-201ENST00000457461 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
CUBNP3-201ENST00000457461 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
CUBNP3-201ENST00000457461 A0A0D9SG42 100 aa3.29□□□□□ -1.88
CUBNP3-201ENST00000457461 M0QZ58 72 aa3.29□□□□□ -1.88
CUBNP3-201ENST00000457461 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
CUBNP3-201ENST00000457461 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
CUBNP3-201ENST00000457461 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
CUBNP3-201ENST00000457461 KRTAP19-2Q3LHN2 52 aa3.2□□□□□ -1.9
CUBNP3-201ENST00000457461 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
CUBNP3-201ENST00000457461 MUC2Q02817 5179 aa3.17□□□□□ -1.9
CUBNP3-201ENST00000457461 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CUBNP3-201ENST00000457461 RNF213Q63HN8 5207 aa3.16□□□□□ -1.9
CUBNP3-201ENST00000457461 UBR4Q5T4S7 5183 aa3.16□□□□□ -1.9
CUBNP3-201ENST00000457461 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.9
CUBNP3-201ENST00000457461 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
CUBNP3-201ENST00000457461 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
CUBNP3-201ENST00000457461 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
CUBNP3-201ENST00000457461 MT1HP80294 61 aa3.02□□□□□ -1.93
CUBNP3-201ENST00000457461 M0R2T5 61 aa2.92□□□□□ -1.94
CUBNP3-201ENST00000457461 MT2AP02795 61 aa2.91□□□□□ -1.94
CUBNP3-201ENST00000457461 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
CUBNP3-201ENST00000457461 TNP1P09430 55 aa2.9□□□□□ -1.94
CUBNP3-201ENST00000457461 MT1FP04733 61 aa2.89□□□□□ -1.95
CUBNP3-201ENST00000457461 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
CUBNP3-201ENST00000457461 KRTAP10-10P60014 251 aa2.84□□□□□ -1.96
CUBNP3-201ENST00000457461 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
CUBNP3-201ENST00000457461 MT1BP07438 61 aa2.75□□□□□ -1.97
CUBNP3-201ENST00000457461 MT3P25713 68 aa2.69□□□□□ -1.98
CUBNP3-201ENST00000457461 USH2AO75445 5202 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 259 ms