RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 RPL37P61927 97 aaKnown RBP10.84□□□□□ -0.67
TMED4-203ENST00000457408 ADM2Q7Z4H4 148 aa10.81□□□□□ -0.68
TMED4-203ENST00000457408 SPATA8Q6RVD6 105 aa10.77□□□□□ -0.69
TMED4-203ENST00000457408 HERC2O95714 4834 aa10.74□□□□□ -0.69
TMED4-203ENST00000457408 J3QL48 77 aa10.73□□□□□ -0.69
TMED4-203ENST00000457408 LINC01554Q52M75 96 aa10.73□□□□□ -0.69
TMED4-203ENST00000457408 KRTAP3-1Q9BYR8 98 aa10.72□□□□□ -0.69
TMED4-203ENST00000457408 LPAP08519 4548 aa10.72□□□□□ -0.69
TMED4-203ENST00000457408 BIRC6Q9NR09 4857 aa10.72□□□□□ -0.69
TMED4-203ENST00000457408 UQCR11O14957 56 aa10.71□□□□□ -0.69
TMED4-203ENST00000457408 LRP2P98164 4655 aa10.69□□□□□ -0.7
TMED4-203ENST00000457408 MIR22HGQ0VDD5 57 aa10.68□□□□□ -0.7
TMED4-203ENST00000457408 TPRXLQ17RH7 258 aa10.67□□□□□ -0.7
TMED4-203ENST00000457408 COX6B2Q6YFQ2 88 aa10.62□□□□□ -0.71
TMED4-203ENST00000457408 CSAG1Q6PB30 78 aa10.49□□□□□ -0.73
TMED4-203ENST00000457408 H3BS24 57 aa10.45□□□□□ -0.74
TMED4-203ENST00000457408 PCLOQ9Y6V0 5065 aa10.41□□□□□ -0.74
TMED4-203ENST00000457408 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
TMED4-203ENST00000457408 S4R3F8 94 aa10.32□□□□□ -0.76
TMED4-203ENST00000457408 H0YAA0 97 aa10.32□□□□□ -0.76
TMED4-203ENST00000457408 HERC1Q15751 4861 aa10.31□□□□□ -0.76
TMED4-203ENST00000457408 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
TMED4-203ENST00000457408 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
TMED4-203ENST00000457408 A0A1B0GU33 70 aa10.27□□□□□ -0.77
TMED4-203ENST00000457408 KRTAP4-1Q9BYQ7 146 aa10.21□□□□□ -0.77
TMED4-203ENST00000457408 KRTAP25-1Q3LHN0 102 aa10.16□□□□□ -0.78
TMED4-203ENST00000457408 MUC17Q685J3 4493 aa10.15□□□□□ -0.78
TMED4-203ENST00000457408 MUC2Q02817 5179 aa10.14□□□□□ -0.79
TMED4-203ENST00000457408 HMCN2Q8NDA2 5059 aa10.07□□□□□ -0.8
TMED4-203ENST00000457408 ROMO1P60602 79 aa10.06□□□□□ -0.8
TMED4-203ENST00000457408 KRTAP10-6P60371 365 aaPredicted RBP10.02□□□□□ -0.81
TMED4-203ENST00000457408 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
TMED4-203ENST00000457408 K7ERS5 55 aa9.98□□□□□ -0.81
TMED4-203ENST00000457408 P0C880 135 aa9.98□□□□□ -0.81
TMED4-203ENST00000457408 KRTAP13-4Q3LI77 160 aa9.87□□□□□ -0.83
TMED4-203ENST00000457408 KRTAP19-2Q3LHN2 52 aa9.86□□□□□ -0.83
TMED4-203ENST00000457408 CRIPTQ9P021 101 aa9.84□□□□□ -0.83
TMED4-203ENST00000457408 A0A0D9SG42 100 aa9.83□□□□□ -0.84
TMED4-203ENST00000457408 UBR4Q5T4S7 5183 aa9.76□□□□□ -0.85
TMED4-203ENST00000457408 RNF213Q63HN8 5207 aa9.73□□□□□ -0.85
TMED4-203ENST00000457408 FLGP20930 4061 aaPredicted RBP9.69□□□□□ -0.86
TMED4-203ENST00000457408 FAT4Q6V0I7 4981 aa9.63□□□□□ -0.87
TMED4-203ENST00000457408 M0QZ58 72 aa9.6□□□□□ -0.87
TMED4-203ENST00000457408 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
TMED4-203ENST00000457408 R4GN34 69 aa9.58□□□□□ -0.88
TMED4-203ENST00000457408 LCE2CQ5TA81 110 aa9.54□□□□□ -0.88
TMED4-203ENST00000457408 SPINT4Q6UDR6 99 aa9.54□□□□□ -0.88
TMED4-203ENST00000457408 KRTAP12-2P59991 146 aa9.5□□□□□ -0.89
TMED4-203ENST00000457408 KRTAP12-1P59990 96 aa9.45□□□□□ -0.9
TMED4-203ENST00000457408 M0R2T5 61 aa9.44□□□□□ -0.9
TMED4-203ENST00000457408 KRTAP15-1Q3LI76 137 aa9.41□□□□□ -0.9
TMED4-203ENST00000457408 C10orf95Q9H7T3 257 aa9.4□□□□□ -0.9
TMED4-203ENST00000457408 MT1HP80294 61 aa9.35□□□□□ -0.91
TMED4-203ENST00000457408 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
TMED4-203ENST00000457408 KRTAP10-10P60014 251 aa9.09□□□□□ -0.95
TMED4-203ENST00000457408 MT2AP02795 61 aa9.06□□□□□ -0.96
TMED4-203ENST00000457408 MT1FP04733 61 aa9.05□□□□□ -0.96
TMED4-203ENST00000457408 CAMK2N1Q7Z7J9 78 aa9.04□□□□□ -0.96
TMED4-203ENST00000457408 KRTAP9-8Q9BYQ0 159 aa9.03□□□□□ -0.96
TMED4-203ENST00000457408 KRTAP19-1Q8IUB9 90 aa8.98□□□□□ -0.97
TMED4-203ENST00000457408 SPRR2GQ9BYE4 73 aa8.96□□□□□ -0.98
TMED4-203ENST00000457408 PLAC4Q8WY50 150 aa8.84□□□□□ -0.99
TMED4-203ENST00000457408 LCE2AQ5TA79 106 aaPredicted RBP8.68□□□□□ -1.02
TMED4-203ENST00000457408 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
TMED4-203ENST00000457408 A0A0A0MQY5 61 aa8.66□□□□□ -1.02
TMED4-203ENST00000457408 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
TMED4-203ENST00000457408 KRTAP19-8Q3LI54 63 aa8.63□□□□□ -1.03
TMED4-203ENST00000457408 LUZP6Q538Z0 58 aa8.59□□□□□ -1.03
TMED4-203ENST00000457408 MT1BP07438 61 aa8.59□□□□□ -1.03
TMED4-203ENST00000457408 TNP1P09430 55 aa8.57□□□□□ -1.04
TMED4-203ENST00000457408 LCE2BO14633 110 aa8.45□□□□□ -1.06
TMED4-203ENST00000457408 USH2AO75445 5202 aa8.41□□□□□ -1.06
TMED4-203ENST00000457408 KRTAP10-5P60370 271 aa8.4□□□□□ -1.06
TMED4-203ENST00000457408 MT1XP80297 61 aa8.4□□□□□ -1.07
TMED4-203ENST00000457408 KRTAP23-1A1A580 65 aa8.37□□□□□ -1.07
TMED4-203ENST00000457408 LCE3AQ5TA76 89 aa8.21□□□□□ -1.09
TMED4-203ENST00000457408 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.1
TMED4-203ENST00000457408 KRTAP10-7P60409 375 aaPredicted RBP8.16□□□□□ -1.1
TMED4-203ENST00000457408 SPRR5A0A1B0GTR4 108 aa8.1□□□□□ -1.11
TMED4-203ENST00000457408 KRTAP10-12P60413 245 aa8.08□□□□□ -1.12
TMED4-203ENST00000457408 FSIP2Q5CZC0 6907 aa8.05□□□□□ -1.12
TMED4-203ENST00000457408 KMT2DO14686 5537 aa7.97□□□□□ -1.13
TMED4-203ENST00000457408 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
TMED4-203ENST00000457408 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
TMED4-203ENST00000457408 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
TMED4-203ENST00000457408 KRTAP4-8A0A0G2JLE6 195 aa7.82□□□□□ -1.16
TMED4-203ENST00000457408 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
TMED4-203ENST00000457408 KRTAP19-6Q3LI70 58 aa7.72□□□□□ -1.17
TMED4-203ENST00000457408 KRTAP19-5Q3LI72 72 aa7.72□□□□□ -1.17
TMED4-203ENST00000457408 LCE2DQ5TA82 110 aaPredicted RBP7.67□□□□□ -1.18
TMED4-203ENST00000457408 FCGBPQ9Y6R7 5405 aaPredicted RBP7.54□□□□□ -1.2
TMED4-203ENST00000457408 INE1O15225 51 aa7.5□□□□□ -1.21
TMED4-203ENST00000457408 KRTAP19-7Q3SYF9 63 aa7.48□□□□□ -1.21
TMED4-203ENST00000457408 KRTAP9-2Q9BYQ4 174 aa7.35□□□□□ -1.23
TMED4-203ENST00000457408 LCE3CQ5T5A8 94 aa7.33□□□□□ -1.24
TMED4-203ENST00000457408 MT1EP04732 61 aa7.32□□□□□ -1.24
TMED4-203ENST00000457408 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
TMED4-203ENST00000457408 MT1LQ93083 61 aa7.23□□□□□ -1.25
TMED4-203ENST00000457408 MUC12Q9UKN1 5478 aa7.21□□□□□ -1.26
TMED4-203ENST00000457408 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms