RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
CPSF6-203ENST00000456847 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
CPSF6-203ENST00000456847 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
CPSF6-203ENST00000456847 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
CPSF6-203ENST00000456847 Q5VV11 94 aa7.3□□□□□ -1.24
CPSF6-203ENST00000456847 MP68P56378 58 aa7.29□□□□□ -1.24
CPSF6-203ENST00000456847 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
CPSF6-203ENST00000456847 NDUFC1O43677 76 aa7.28□□□□□ -1.24
CPSF6-203ENST00000456847 OCR1Q9BZK8 76 aa7.27□□□□□ -1.25
CPSF6-203ENST00000456847 A8MUN3 132 aa7.26□□□□□ -1.25
CPSF6-203ENST00000456847 MT-ATP8P03928 68 aa7.26□□□□□ -1.25
CPSF6-203ENST00000456847 IMUPQ9GZP8 106 aa7.26□□□□□ -1.25
CPSF6-203ENST00000456847 MT1BP07438 61 aa7.25□□□□□ -1.25
CPSF6-203ENST00000456847 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
CPSF6-203ENST00000456847 A6NN06 94 aa7.21□□□□□ -1.25
CPSF6-203ENST00000456847 CRIPTQ9P021 101 aa7.21□□□□□ -1.25
CPSF6-203ENST00000456847 SCGB1A1P11684 91 aa7.19□□□□□ -1.26
CPSF6-203ENST00000456847 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
CPSF6-203ENST00000456847 H0YAA0 97 aa7.16□□□□□ -1.26
CPSF6-203ENST00000456847 H3BPC8 53 aa7.16□□□□□ -1.26
CPSF6-203ENST00000456847 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
CPSF6-203ENST00000456847 SEC61GP60059 68 aa7.11□□□□□ -1.27
CPSF6-203ENST00000456847 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
CPSF6-203ENST00000456847 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
CPSF6-203ENST00000456847 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
CPSF6-203ENST00000456847 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
CPSF6-203ENST00000456847 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
CPSF6-203ENST00000456847 C20orf197Q8N268 126 aa6.99□□□□□ -1.29
CPSF6-203ENST00000456847 TRAV7A0A075B6U4 112 aa6.97□□□□□ -1.29
CPSF6-203ENST00000456847 R4GN34 69 aa6.96□□□□□ -1.3
CPSF6-203ENST00000456847 P0C880 135 aa6.95□□□□□ -1.3
CPSF6-203ENST00000456847 M0QZ58 72 aa6.91□□□□□ -1.3
CPSF6-203ENST00000456847 ACYP2P14621 99 aa6.91□□□□□ -1.3
CPSF6-203ENST00000456847 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
CPSF6-203ENST00000456847 SERP2Q8N6R1 65 aa6.9□□□□□ -1.3
CPSF6-203ENST00000456847 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
CPSF6-203ENST00000456847 SPTSSBQ8NFR3 76 aa6.86□□□□□ -1.31
CPSF6-203ENST00000456847 ANAPC13Q9BS18 74 aa6.85□□□□□ -1.31
CPSF6-203ENST00000456847 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
CPSF6-203ENST00000456847 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
CPSF6-203ENST00000456847 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
CPSF6-203ENST00000456847 COX7CP15954 63 aa6.82□□□□□ -1.32
CPSF6-203ENST00000456847 V9GYY9 64 aa6.82□□□□□ -1.32
CPSF6-203ENST00000456847 MT1XP80297 61 aa6.81□□□□□ -1.32
CPSF6-203ENST00000456847 KRTAP5-9P26371 169 aa6.77□□□□□ -1.33
CPSF6-203ENST00000456847 NEBP20929 6669 aa6.76□□□□□ -1.33
CPSF6-203ENST00000456847 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
CPSF6-203ENST00000456847 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.34
CPSF6-203ENST00000456847 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
CPSF6-203ENST00000456847 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
CPSF6-203ENST00000456847 SPRR2FQ96RM1 72 aa6.63□□□□□ -1.35
CPSF6-203ENST00000456847 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
CPSF6-203ENST00000456847 CYSTM1Q9H1C7 97 aa6.62□□□□□ -1.35
CPSF6-203ENST00000456847 KRTAP20-1Q3LI63 56 aa6.6□□□□□ -1.35
CPSF6-203ENST00000456847 H7BZZ5 65 aa6.6□□□□□ -1.35
CPSF6-203ENST00000456847 PRO0628Q9UI54 55 aa6.6□□□□□ -1.35
CPSF6-203ENST00000456847 KMT2DO14686 5537 aa6.59□□□□□ -1.35
CPSF6-203ENST00000456847 COA5Q86WW8 74 aa6.56□□□□□ -1.36
CPSF6-203ENST00000456847 SPRR2EP22531 72 aa6.54□□□□□ -1.36
CPSF6-203ENST00000456847 SPRR2BP35325 72 aa6.54□□□□□ -1.36
CPSF6-203ENST00000456847 SPRR2AP35326 72 aa6.54□□□□□ -1.36
CPSF6-203ENST00000456847 H3BS24 57 aa6.51□□□□□ -1.37
CPSF6-203ENST00000456847 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
CPSF6-203ENST00000456847 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
CPSF6-203ENST00000456847 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
CPSF6-203ENST00000456847 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
CPSF6-203ENST00000456847 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
CPSF6-203ENST00000456847 ATP5EP56381 51 aaPredicted RBP6.46□□□□□ -1.37
CPSF6-203ENST00000456847 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.37
CPSF6-203ENST00000456847 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
CPSF6-203ENST00000456847 TMEM258P61165 79 aa6.45□□□□□ -1.38
CPSF6-203ENST00000456847 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
CPSF6-203ENST00000456847 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
CPSF6-203ENST00000456847 KRTAP2-3P0C7H8 128 aa6.41□□□□□ -1.38
CPSF6-203ENST00000456847 KRTAP2-4Q9BYR9 128 aa6.41□□□□□ -1.38
CPSF6-203ENST00000456847 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.38
CPSF6-203ENST00000456847 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
CPSF6-203ENST00000456847 A0A0D9SG42 100 aa6.35□□□□□ -1.39
CPSF6-203ENST00000456847 SPRR2DP22532 72 aa6.33□□□□□ -1.4
CPSF6-203ENST00000456847 SPATA8Q6RVD6 105 aa6.32□□□□□ -1.4
CPSF6-203ENST00000456847 A0A1B0GU33 70 aa6.31□□□□□ -1.4
CPSF6-203ENST00000456847 PMAIP1Q13794 54 aa6.29□□□□□ -1.4
CPSF6-203ENST00000456847 SPINT4Q6UDR6 99 aa6.27□□□□□ -1.41
CPSF6-203ENST00000456847 A0A1B0GU69 56 aa6.24□□□□□ -1.41
CPSF6-203ENST00000456847 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.42
CPSF6-203ENST00000456847 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.42
CPSF6-203ENST00000456847 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
CPSF6-203ENST00000456847 SMIM26A0A096LP01 95 aa6.15□□□□□ -1.42
CPSF6-203ENST00000456847 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
CPSF6-203ENST00000456847 A8MU10 97 aa6.09□□□□□ -1.44
CPSF6-203ENST00000456847 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
CPSF6-203ENST00000456847 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
CPSF6-203ENST00000456847 LINC01558Q9Y6Z2 57 aa6.07□□□□□ -1.44
CPSF6-203ENST00000456847 MT1EP04732 61 aa6.03□□□□□ -1.44
CPSF6-203ENST00000456847 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
CPSF6-203ENST00000456847 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
CPSF6-203ENST00000456847 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
CPSF6-203ENST00000456847 Q1T7F1 81 aa5.97□□□□□ -1.45
CPSF6-203ENST00000456847 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
CPSF6-203ENST00000456847 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms